RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	POU3F3	P20264	500 aa	Predicted RBP	6.57	□□□□□ -1.36
ECHDC1-222	ENST00000531967	ACBD5	Q5T8D3	534 aa	Predicted RBP	6.57	□□□□□ -1.36
ECHDC1-222	ENST00000531967	PTCD2	Q8WV60	388 aa	Known RBP	6.57	□□□□□ -1.36
ECHDC1-222	ENST00000531967	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	6.57	□□□□□ -1.36
ECHDC1-222	ENST00000531967	NUB1	Q9Y5A7	615 aa		6.57	□□□□□ -1.36
ECHDC1-222	ENST00000531967	KSR2	Q6VAB6	950 aa		6.56	□□□□□ -1.36
ECHDC1-222	ENST00000531967	MYO1H	Q8N1T3	1032 aa		6.56	□□□□□ -1.36
ECHDC1-222	ENST00000531967	HNRNPLL	Q8WVV9	542 aa	Known RBP	6.56	□□□□□ -1.36
ECHDC1-222	ENST00000531967	CTDP1	Q9Y5B0	961 aa	Predicted RBP	6.56	□□□□□ -1.36
ECHDC1-222	ENST00000531967	MRVI1	Q9Y6F6	885 aa		6.56	□□□□□ -1.36
ECHDC1-222	ENST00000531967	CNGA1	P29973	690 aa		6.56	□□□□□ -1.36
ECHDC1-222	ENST00000531967	C6orf132	Q5T0Z8	1188 aa		6.56	□□□□□ -1.36
ECHDC1-222	ENST00000531967	FTSJ3	Q8IY81	847 aa	Known RBP	6.56	□□□□□ -1.36
ECHDC1-222	ENST00000531967	COL26A1	Q96A83	441 aa		6.56	□□□□□ -1.36
ECHDC1-222	ENST00000531967	PTPRH	Q9HD43	1115 aa		6.56	□□□□□ -1.36
ECHDC1-222	ENST00000531967	KCNQ2	O43526	872 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	FZD6	O60353	706 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	GCGR	P47871	477 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	GTF2I	P78347	998 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	SQSTM1	Q13501	440 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	CNGB1	Q14028	1251 aa	Predicted RBP	6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	CASC1	Q6TDU7	716 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	MUC3B	Q9H195	1237 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	ZNF69	Q9UC07	566 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967		V9GY48	417 aa	Predicted RBP	6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	MYL3	P08590	195 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	MCL1	Q07820	350 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	TTC30B	Q8N4P2	665 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	NGDN	Q8NEJ9	315 aa	Known RBP	6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	SYMPK	Q92797	1274 aa	Known RBP	6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	CDCA7L	Q96GN5	454 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	CFHR5	Q9BXR6	569 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	IFT122	Q9HBG6	1241 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	TAGLN3	Q9UI15	199 aa		6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	SALL2	Q9Y467	1007 aa	Predicted RBP	6.55	□□□□□ -1.36
ECHDC1-222	ENST00000531967	DYTN	A2CJ06	578 aa		6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	ALG1L2	C9J202	215 aa		6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	DNAJB2	P25686	324 aa		6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	TSGA10IP	Q3SY00	556 aa		6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	CC2D1A	Q6P1N0	951 aa	Predicted RBP	6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	SLC4A10	Q6U841	1118 aa		6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	ARMCX6	Q7L4S7	300 aa		6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	TTC8	Q8TAM2	541 aa		6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	TSPAN18	Q96SJ8	248 aa		6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	NIF3L1	Q9GZT8	377 aa		6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	TMEM134	Q9H6X4	195 aa		6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	RNASEH2A	O75792	299 aa	Known RBP	6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	PUS10	Q3MIT2	529 aa	Known RBP	6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	DDX42	Q86XP3	938 aa	Known RBP eCLIP	6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	CCDC89	Q8N998	374 aa		6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	TRPC6	Q9Y210	931 aa		6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	PPP2R3B	Q9Y5P8	575 aa		6.54	□□□□□ -1.36
ECHDC1-222	ENST00000531967	TMEM238L	A0A1B0GVL6	79 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	GOLGA6C	A6NDK9	693 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	GOLGA6B	A6NDN3	693 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	SLC26A4	O43511	780 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	GOLGA6D	P0CG33	693 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	NASP	P49321	788 aa	Predicted RBP	6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	TERF1	P54274	439 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	MORC3	Q14149	939 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	CCDC70	Q6NSX1	233 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	GOLGA6A	Q9NYA3	693 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	FKBPL	Q9UIM3	349 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	LEMD3	Q9Y2U8	911 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	PITPNM1	O00562	1244 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	PML	P29590	882 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	CASP2	P42575	452 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	EIF1AX	P47813	144 aa	Known RBP	6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	KANK3	Q6NY19	840 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	ERAP2	Q6P179	960 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	NOL7	Q9UMY1	257 aa	Known RBP	6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	SPG7	Q9UQ90	795 aa		6.53	□□□□□ -1.36
ECHDC1-222	ENST00000531967	BICDL2	A1A5D9	508 aa		6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	TTC36	A6NLP5	189 aa		6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	CACNB1	Q02641	598 aa	Predicted RBP	6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	DALRD3	Q5D0E6	543 aa	Known RBP	6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	FBF1	Q8TES7	1133 aa		6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	EMID1	Q96A84	441 aa	Predicted RBP	6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	FAM198A	Q9UFP1	575 aa		6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	CDV3	Q9UKY7	258 aa	Known RBP	6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	SETD1B	Q9UPS6	1966 aa	Known RBP	6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	HIP1R	O75146	1068 aa		6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	RAB27A	P51159	221 aa		6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	SPICE1	Q8N0Z3	855 aa		6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	GAS2L2	Q8NHY3	880 aa		6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	ZIM2	Q9NZV7	527 aa		6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	MSRB2	Q9Y3D2	182 aa		6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	USP31	Q70CQ4	1352 aa		6.52	□□□□□ -1.37
ECHDC1-222	ENST00000531967	WASHC2C	Q9Y4E1	1318 aa		6.51	□□□□□ -1.37
ECHDC1-222	ENST00000531967	GLIPR1L2	Q4G1C9	344 aa		6.51	□□□□□ -1.37
ECHDC1-222	ENST00000531967	CCDC93	Q567U6	631 aa		6.51	□□□□□ -1.37
ECHDC1-222	ENST00000531967	TMEM92	Q6UXU6	159 aa		6.51	□□□□□ -1.37
ECHDC1-222	ENST00000531967	PODN	Q7Z5L7	613 aa		6.51	□□□□□ -1.37
ECHDC1-222	ENST00000531967	CCDC113	Q9H0I3	377 aa		6.51	□□□□□ -1.37
ECHDC1-222	ENST00000531967	BOLA1	Q9Y3E2	137 aa		6.51	□□□□□ -1.37
ECHDC1-222	ENST00000531967	SRGN	P10124	158 aa		6.51	□□□□□ -1.37
ECHDC1-222	ENST00000531967	EIF4B	P23588	611 aa	Known RBP	6.51	□□□□□ -1.37
ECHDC1-222	ENST00000531967	LONRF1	Q17RB8	773 aa		6.51	□□□□□ -1.37
ECHDC1-222	ENST00000531967	ALF	Q53S48	1182 aa		6.51	□□□□□ -1.37

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