RNA–Protein interactions for RNA: ENST00000531461.5

ACER3-211, Transcript of alkaline ceramidase 3, humanhuman

TSL 2

Gene ACER3, Length 1,292 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-211ENST00000531461 SYNE4Q8N205 404 aa31.51■■■□□ 2.63
ACER3-211ENST00000531461 RPGRQ92834 1020 aaKnown RBP31.51■■■□□ 2.63
ACER3-211ENST00000531461 CRAMP1Q96RY5 1269 aa31.5■■■□□ 2.63
ACER3-211ENST00000531461 TAF1DQ9H5J8 278 aaPredicted RBP31.5■■■□□ 2.63
ACER3-211ENST00000531461 ZNF541Q9H0D2 1346 aa31.49■■■□□ 2.63
ACER3-211ENST00000531461 POTEIP0CG38 1075 aa31.49■■■□□ 2.63
ACER3-211ENST00000531461 POTEJP0CG39 1038 aa31.49■■■□□ 2.63
ACER3-211ENST00000531461 LDHDQ86WU2 507 aa31.49■■■□□ 2.63
ACER3-211ENST00000531461 ANKRD36CQ5JPF3 1778 aa31.48■■■□□ 2.63
ACER3-211ENST00000531461 EIF2S2P20042 333 aaKnown RBP31.48■■■□□ 2.63
ACER3-211ENST00000531461 DDX10Q13206 875 aaKnown RBP31.48■■■□□ 2.63
ACER3-211ENST00000531461 RBM17Q96I25 401 aaKnown RBP31.47■■■□□ 2.63
ACER3-211ENST00000531461 CREBZFQ9NS37 354 aa31.47■■■□□ 2.63
ACER3-211ENST00000531461 RNF123Q5XPI4 1314 aa31.47■■■□□ 2.63
ACER3-211ENST00000531461 PROSER3Q2NL68 480 aa31.46■■■□□ 2.63
ACER3-211ENST00000531461 SLC10A5Q5PT55 438 aa31.46■■■□□ 2.63
ACER3-211ENST00000531461 ADAMTSL1Q8N6G6 1762 aa31.45■■■□□ 2.63
ACER3-211ENST00000531461 CHL1O00533 1208 aa31.45■■■□□ 2.63
ACER3-211ENST00000531461 GPC2Q8N158 579 aa31.44■■■□□ 2.62
ACER3-211ENST00000531461 JDP2Q8WYK2 163 aa31.44■■■□□ 2.62
ACER3-211ENST00000531461 RUNDC1Q96C34 613 aa31.44■■■□□ 2.62
ACER3-211ENST00000531461 NLRP3Q96P20 1036 aa31.44■■■□□ 2.62
ACER3-211ENST00000531461 HACL1Q9UJ83 578 aa31.44■■■□□ 2.62
ACER3-211ENST00000531461 PASKQ96RG2 1323 aa31.44■■■□□ 2.62
ACER3-211ENST00000531461 HSP90AB3PQ58FF7 597 aa31.43■■■□□ 2.62
ACER3-211ENST00000531461 UTP14AQ9BVJ6 771 aaKnown RBP31.43■■■□□ 2.62
ACER3-211ENST00000531461 ANXA1P04083 346 aa31.41■■■□□ 2.62
ACER3-211ENST00000531461 C3orf67Q6ZVT6 689 aa31.41■■■□□ 2.62
ACER3-211ENST00000531461 CCDC146Q8IYE0 955 aa31.41■■■□□ 2.62
ACER3-211ENST00000531461 DDX21Q9NR30 783 aaKnown RBP eCLIP31.41■■■□□ 2.62
ACER3-211ENST00000531461 TRIM35Q9UPQ4 493 aa31.41■■■□□ 2.62
ACER3-211ENST00000531461 PPEF1O14829 653 aaPredicted RBP31.4■■■□□ 2.62
ACER3-211ENST00000531461 COPS6Q7L5N1 327 aa31.4■■■□□ 2.62
ACER3-211ENST00000531461 PNMA8AQ86V59 439 aaPredicted RBP31.4■■■□□ 2.62
ACER3-211ENST00000531461 COL4A5P29400 1685 aa31.4■■■□□ 2.62
ACER3-211ENST00000531461 LAMB2P55268 1798 aa31.39■■■□□ 2.62
ACER3-211ENST00000531461 EPHX2P34913 555 aa31.39■■■□□ 2.62
ACER3-211ENST00000531461 WDR43Q15061 677 aaKnown RBP eCLIP31.39■■■□□ 2.627e-25■■■■■ 56.8
ACER3-211ENST00000531461 NEUROD2Q15784 382 aa31.39■■■□□ 2.62
ACER3-211ENST00000531461 ITGBL1O95965 494 aaPredicted RBP31.38■■■□□ 2.61
ACER3-211ENST00000531461 HOXB7P09629 217 aa31.38■■■□□ 2.61
ACER3-211ENST00000531461 XAGE3Q8WTP9 111 aa31.38■■■□□ 2.61
ACER3-211ENST00000531461 EIF6P56537 245 aaKnown RBP31.37■■■□□ 2.61
ACER3-211ENST00000531461 NLRP10Q86W26 655 aa31.37■■■□□ 2.61
ACER3-211ENST00000531461 VPS33BQ9H267 617 aa31.37■■■□□ 2.61
ACER3-211ENST00000531461 TCIRG1Q13488 830 aa31.36■■■□□ 2.61
ACER3-211ENST00000531461 COL13A1Q5TAT6 717 aaPredicted RBP31.36■■■□□ 2.61
ACER3-211ENST00000531461 ADAMTS8Q9UP79 889 aa31.36■■■□□ 2.61
ACER3-211ENST00000531461 ATP6V0A2Q9Y487 856 aa31.36■■■□□ 2.61
ACER3-211ENST00000531461 EAPPQ56P03 285 aaPredicted RBP31.35■■■□□ 2.61
ACER3-211ENST00000531461 HSPA1AP0DMV8 641 aaKnown RBP31.34■■■□□ 2.61
ACER3-211ENST00000531461 HSPA1BP0DMV9 641 aaKnown RBP31.34■■■□□ 2.61
ACER3-211ENST00000531461 LARGE2Q8N3Y3 721 aa31.34■■■□□ 2.61
ACER3-211ENST00000531461 NECTIN2Q92692 538 aa31.34■■■□□ 2.61
ACER3-211ENST00000531461 ABCC4O15439 1325 aa31.33■■■□□ 2.61
ACER3-211ENST00000531461 AIMP1Q12904 312 aaKnown RBP31.33■■■□□ 2.61
ACER3-211ENST00000531461 KRT24Q2M2I5 525 aa31.33■■■□□ 2.61
ACER3-211ENST00000531461 TMX4Q9H1E5 349 aaPredicted RBP31.33■■■□□ 2.61
ACER3-211ENST00000531461 CNTNAP1P78357 1384 aa31.32■■■□□ 2.6
ACER3-211ENST00000531461 BBOX1O75936 387 aa31.32■■■□□ 2.6
ACER3-211ENST00000531461 CFAP44Q96MT7 982 aa31.31■■■□□ 2.6
ACER3-211ENST00000531461 RTFDC1Q9BY42 306 aaPredicted RBP31.31■■■□□ 2.6
ACER3-211ENST00000531461 LTBP1Q14766 1721 aa31.31■■■□□ 2.6
ACER3-211ENST00000531461 SH3TC1Q8TE82 1336 aa31.3■■■□□ 2.6
ACER3-211ENST00000531461 TMEM88BA6NKF7 163 aa31.3■■■□□ 2.6
ACER3-211ENST00000531461 HDGFL1Q5TGJ6 251 aa31.3■■■□□ 2.6
ACER3-211ENST00000531461 SLC51AQ86UW1 340 aa31.3■■■□□ 2.6
ACER3-211ENST00000531461 PRKRIP1Q9H875 184 aaPredicted RBP31.3■■■□□ 2.6
ACER3-211ENST00000531461 CHPF2Q9P2E5 772 aa31.3■■■□□ 2.6
ACER3-211ENST00000531461 TRMT112Q9UI30 125 aaKnown RBP31.3■■■□□ 2.6
ACER3-211ENST00000531461 CLEC11AQ9Y240 323 aa31.3■■■□□ 2.6
ACER3-211ENST00000531461 LAS1LQ9Y4W2 734 aaKnown RBP31.3■■■□□ 2.6
ACER3-211ENST00000531461 TCERG1O14776 1098 aaKnown RBP31.29■■■□□ 2.6
ACER3-211ENST00000531461 NIM1KQ8IY84 436 aa31.29■■■□□ 2.6
ACER3-211ENST00000531461 SUPT20HQ8NEM7 779 aa31.29■■■□□ 2.6
ACER3-211ENST00000531461 PLBD2Q8NHP8 589 aa31.29■■■□□ 2.6
ACER3-211ENST00000531461 DBF4Q9UBU7 674 aaPredicted RBP31.29■■■□□ 2.6
ACER3-211ENST00000531461 MKRN1Q9UHC7 482 aaKnown RBP31.29■■■□□ 2.6
ACER3-211ENST00000531461 SCNN1DP51172 638 aa31.28■■■□□ 2.6
ACER3-211ENST00000531461 SP8Q8IXZ3 490 aa31.28■■■□□ 2.6
ACER3-211ENST00000531461 CNTROBQ8N137 903 aa31.28■■■□□ 2.6
ACER3-211ENST00000531461 GJA3Q9Y6H8 435 aa31.28■■■□□ 2.6
ACER3-211ENST00000531461 PPIP5K2O43314 1243 aa31.27■■■□□ 2.6
ACER3-211ENST00000531461 HCLS1P14317 486 aaPredicted RBP31.27■■■□□ 2.6
ACER3-211ENST00000531461 LMOD1P29536 600 aaPredicted RBP31.27■■■□□ 2.6
ACER3-211ENST00000531461 ANKRD13DQ6ZTN6 518 aa31.26■■■□□ 2.59
ACER3-211ENST00000531461 DDX60Q8IY21 1712 aaKnown RBP31.26■■■□□ 2.59
ACER3-211ENST00000531461 MAP1SQ66K74 1059 aaPredicted RBP31.25■■■□□ 2.59
ACER3-211ENST00000531461 DDX46Q7L014 1031 aaKnown RBP31.25■■■□□ 2.59
ACER3-211ENST00000531461 GRAPQ13588 217 aa31.24■■■□□ 2.59
ACER3-211ENST00000531461 AOC3Q16853 763 aa31.24■■■□□ 2.59
ACER3-211ENST00000531461 TMC4Q7Z404 712 aa31.24■■■□□ 2.59
ACER3-211ENST00000531461 GRAPLQ8TC17 118 aaPredicted RBP31.24■■■□□ 2.59
ACER3-211ENST00000531461 ISCA1Q9BUE6 129 aa31.24■■■□□ 2.59
ACER3-211ENST00000531461 HYPKQ9NX55 129 aa31.24■■■□□ 2.59
ACER3-211ENST00000531461 ZNF853P0CG23 659 aa31.23■■■□□ 2.59
ACER3-211ENST00000531461 DUSP27Q5VZP5 1158 aa31.23■■■□□ 2.59
ACER3-211ENST00000531461 LRRC37AA6NMS7 1700 aa31.23■■■□□ 2.59
ACER3-211ENST00000531461 TAF1P21675 1872 aa31.23■■■□□ 2.59
ACER3-211ENST00000531461 EPS15P42566 896 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms