RNA–Protein interactions for RNA: ENST00000529199.1

CTSF-206, Transcript of cathepsin F, humanhuman

TSL 4

Gene CTSF, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-206ENST00000529199 ZNF34Q8IZ26 560 aa26.22■■□□□ 1.79
CTSF-206ENST00000529199 RBM17Q96I25 401 aaKnown RBP26.22■■□□□ 1.79
CTSF-206ENST00000529199 ITGBL1O95965 494 aaPredicted RBP26.21■■□□□ 1.79
CTSF-206ENST00000529199 HOXA10P31260 410 aaPredicted RBP26.21■■□□□ 1.79
CTSF-206ENST00000529199 RIPK4P57078 832 aa26.21■■□□□ 1.79
CTSF-206ENST00000529199 GIGYF2Q6Y7W6 1299 aaKnown RBP26.21■■□□□ 1.79
CTSF-206ENST00000529199 PNMA8AQ86V59 439 aaPredicted RBP26.21■■□□□ 1.79
CTSF-206ENST00000529199 GPC2Q8N158 579 aa26.21■■□□□ 1.79
CTSF-206ENST00000529199 LAMB4A4D0S4 1761 aa26.2■■□□□ 1.79
CTSF-206ENST00000529199 TMEM88BA6NKF7 163 aa26.2■■□□□ 1.78
CTSF-206ENST00000529199 EIF6P56537 245 aaKnown RBP26.2■■□□□ 1.78
CTSF-206ENST00000529199 MAP1SQ66K74 1059 aaPredicted RBP26.2■■□□□ 1.78
CTSF-206ENST00000529199 PPP1R42Q7Z4L9 355 aa26.2■■□□□ 1.78
CTSF-206ENST00000529199 DLG5Q8TDM6 1919 aa26.2■■□□□ 1.78
CTSF-206ENST00000529199 ERBB4Q15303 1308 aa26.18■■□□□ 1.78
CTSF-206ENST00000529199 KDM3BQ7LBC6 1761 aa26.18■■□□□ 1.78
CTSF-206ENST00000529199 PPEF1O14829 653 aaPredicted RBP26.18■■□□□ 1.78
CTSF-206ENST00000529199 NTSR2O95665 410 aa26.18■■□□□ 1.78
CTSF-206ENST00000529199 C3orf67Q6ZVT6 689 aa26.18■■□□□ 1.78
CTSF-206ENST00000529199 CNTROBQ8N137 903 aa26.18■■□□□ 1.78
CTSF-206ENST00000529199 LARGE2Q8N3Y3 721 aa26.18■■□□□ 1.78
CTSF-206ENST00000529199 CRAMP1Q96RY5 1269 aa26.18■■□□□ 1.78
CTSF-206ENST00000529199 SCN4AP35499 1836 aa26.18■■□□□ 1.78
CTSF-206ENST00000529199 CNTNAP1P78357 1384 aa26.18■■□□□ 1.78
CTSF-206ENST00000529199 ANXA1P04083 346 aa26.17■■□□□ 1.78
CTSF-206ENST00000529199 SLC51AQ86UW1 340 aa26.17■■□□□ 1.78
CTSF-206ENST00000529199 NLRP3Q96P20 1036 aa26.17■■□□□ 1.78
CTSF-206ENST00000529199 TMX4Q9H1E5 349 aaPredicted RBP26.17■■□□□ 1.78
CTSF-206ENST00000529199 NUP98P52948 1817 aa26.16■■□□□ 1.78
CTSF-206ENST00000529199 VEGFBP49765 207 aa26.16■■□□□ 1.78
CTSF-206ENST00000529199 GRIPAP1Q4V328 841 aa26.16■■□□□ 1.78
CTSF-206ENST00000529199 PARP10Q53GL7 1025 aa26.16■■□□□ 1.78
CTSF-206ENST00000529199 NECTIN2Q92692 538 aa26.16■■□□□ 1.78
CTSF-206ENST00000529199 UTP14AQ9BVJ6 771 aaKnown RBP26.16■■□□□ 1.78
CTSF-206ENST00000529199 IBTKQ9P2D0 1353 aaPredicted RBP26.16■■□□□ 1.78
CTSF-206ENST00000529199 LMOD1P29536 600 aaPredicted RBP26.15■■□□□ 1.78
CTSF-206ENST00000529199 PDIA6Q15084 440 aa26.15■■□□□ 1.78
CTSF-206ENST00000529199 PROSER3Q2NL68 480 aa26.15■■□□□ 1.78
CTSF-206ENST00000529199 SNED1Q8TER0 1413 aa26.14■■□□□ 1.77
CTSF-206ENST00000529199 FOXN1O15353 648 aa26.13■■□□□ 1.77
CTSF-206ENST00000529199 AIMP1Q12904 312 aaKnown RBP26.13■■□□□ 1.77
CTSF-206ENST00000529199 RIC1Q4ADV7 1423 aa26.13■■□□□ 1.77
CTSF-206ENST00000529199 TMPOP42166 694 aaKnown RBP26.12■■□□□ 1.77
CTSF-206ENST00000529199 NEUROD2Q15784 382 aa26.12■■□□□ 1.77
CTSF-206ENST00000529199 LRP10Q7Z4F1 713 aa26.12■■□□□ 1.77
CTSF-206ENST00000529199 NIM1KQ8IY84 436 aa26.12■■□□□ 1.77
CTSF-206ENST00000529199 AIDAQ96BJ3 306 aa26.12■■□□□ 1.77
CTSF-206ENST00000529199 PPIP5K2O43314 1243 aa26.11■■□□□ 1.77
CTSF-206ENST00000529199 EPS15P42566 896 aa26.11■■□□□ 1.77
CTSF-206ENST00000529199 LMOD3Q0VAK6 560 aa26.11■■□□□ 1.77
CTSF-206ENST00000529199 RALBP1Q15311 655 aa26.11■■□□□ 1.77
CTSF-206ENST00000529199 COPS6Q7L5N1 327 aa26.11■■□□□ 1.77
CTSF-206ENST00000529199 DEFB115Q30KQ5 88 aa26.1■■□□□ 1.77
CTSF-206ENST00000529199 SLC10A5Q5PT55 438 aa26.1■■□□□ 1.77
CTSF-206ENST00000529199 BABAM1Q9NWV8 329 aa26.1■■□□□ 1.77
CTSF-206ENST00000529199 AOC3Q16853 763 aa26.09■■□□□ 1.77
CTSF-206ENST00000529199 CCDC146Q8IYE0 955 aa26.09■■□□□ 1.77
CTSF-206ENST00000529199 XAGE3Q8WTP9 111 aa26.09■■□□□ 1.77
CTSF-206ENST00000529199 ABT1Q9ULW3 272 aaKnown RBP26.09■■□□□ 1.77
CTSF-206ENST00000529199 ATP6V0A2Q9Y487 856 aa26.09■■□□□ 1.77
CTSF-206ENST00000529199 LAS1LQ9Y4W2 734 aaKnown RBP26.09■■□□□ 1.77
CTSF-206ENST00000529199 COL4A5P29400 1685 aa26.09■■□□□ 1.77
CTSF-206ENST00000529199 HCLS1P14317 486 aaPredicted RBP26.08■■□□□ 1.77
CTSF-206ENST00000529199 SCNN1DP51172 638 aa26.08■■□□□ 1.77
CTSF-206ENST00000529199 HSP90AB3PQ58FF7 597 aa26.07■■□□□ 1.76
CTSF-206ENST00000529199 ZNF428Q96B54 188 aa26.07■■□□□ 1.76
CTSF-206ENST00000529199 ABCC4O15439 1325 aa26.07■■□□□ 1.76
CTSF-206ENST00000529199 DDX21Q9NR30 783 aaKnown RBP eCLIP26.06■■□□□ 1.76
CTSF-206ENST00000529199 TRMT112Q9UI30 125 aaKnown RBP26.06■■□□□ 1.76
CTSF-206ENST00000529199 CTCFP49711 727 aaPredicted RBP26.05■■□□□ 1.76
CTSF-206ENST00000529199 KRT24Q2M2I5 525 aa26.05■■□□□ 1.76
CTSF-206ENST00000529199 NLRP10Q86W26 655 aa26.05■■□□□ 1.76
CTSF-206ENST00000529199 SUPT20HQ8NEM7 779 aa26.05■■□□□ 1.76
CTSF-206ENST00000529199 RASSF10A6NK89 507 aa26.04■■□□□ 1.76
CTSF-206ENST00000529199 BBOX1O75936 387 aa26.04■■□□□ 1.76
CTSF-206ENST00000529199 FMR1Q06787 632 aaKnown RBP eCLIP26.04■■□□□ 1.76
CTSF-206ENST00000529199 TCIRG1Q13488 830 aa26.04■■□□□ 1.76
CTSF-206ENST00000529199 DPP8Q6V1X1 898 aaPredicted RBP26.04■■□□□ 1.76
CTSF-206ENST00000529199 USP50Q70EL3 339 aaPredicted RBP26.04■■□□□ 1.76
CTSF-206ENST00000529199 ADAMTSL1Q8N6G6 1762 aa26.03■■□□□ 1.76
CTSF-206ENST00000529199 DDX10Q13206 875 aaKnown RBP26.03■■□□□ 1.76
CTSF-206ENST00000529199 PAXIP1Q6ZW49 1069 aaPredicted RBP26.03■■□□□ 1.76
CTSF-206ENST00000529199 VPS33BQ9H267 617 aa26.03■■□□□ 1.76
CTSF-206ENST00000529199 WBP1LQ9NX94 342 aa26.03■■□□□ 1.76
CTSF-206ENST00000529199 ZNRF3Q9ULT6 936 aa26.03■■□□□ 1.76
CTSF-206ENST00000529199 WDR33Q9C0J8 1336 aaKnown RBP26.03■■□□□ 1.76
CTSF-206ENST00000529199 CXCL9Q07325 125 aa26.02■■□□□ 1.76
CTSF-206ENST00000529199 DDX46Q7L014 1031 aaKnown RBP26.02■■□□□ 1.76
CTSF-206ENST00000529199 SP8Q8IXZ3 490 aa26.02■■□□□ 1.76
CTSF-206ENST00000529199 MPNDQ8N594 471 aa26.02■■□□□ 1.76
CTSF-206ENST00000529199 PRDM10Q9NQV6 1147 aa26.02■■□□□ 1.76
CTSF-206ENST00000529199 CHL1O00533 1208 aa26.01■■□□□ 1.75
CTSF-206ENST00000529199 SH3TC1Q8TE82 1336 aa26.01■■□□□ 1.75
CTSF-206ENST00000529199 TRAF5O00463 557 aa26■■□□□ 1.75
CTSF-206ENST00000529199 LBX1P52954 281 aa26■■□□□ 1.75
CTSF-206ENST00000529199 GRM1Q13255 1194 aa26■■□□□ 1.75
CTSF-206ENST00000529199 RTFDC1Q9BY42 306 aaPredicted RBP26■■□□□ 1.75
CTSF-206ENST00000529199 GPRC5DQ9NZD1 345 aa26■■□□□ 1.75
CTSF-206ENST00000529199 CHPF2Q9P2E5 772 aa26■■□□□ 1.75
CTSF-206ENST00000529199 WDR43Q15061 677 aaKnown RBP eCLIP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms