RNA–Protein interactions for RNA: ENST00000529045.1

PTPN22-208, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 4

Gene PTPN22, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-208ENST00000529045 STK32AQ8WU08 396 aa9.43□□□□□ -0.9
PTPN22-208ENST00000529045 PCDHB9Q9Y5E1 797 aa9.43□□□□□ -0.9
PTPN22-208ENST00000529045 PRAG1Q86YV5 1406 aa9.42□□□□□ -0.9
PTPN22-208ENST00000529045 PIK3R4Q99570 1358 aa9.42□□□□□ -0.9
PTPN22-208ENST00000529045 ZNF644Q9H582 1327 aaPredicted RBP9.42□□□□□ -0.9
PTPN22-208ENST00000529045 TSPY4P0CV99 314 aa9.42□□□□□ -0.9
PTPN22-208ENST00000529045 TSPY10P0CW01 314 aa9.42□□□□□ -0.9
PTPN22-208ENST00000529045 BECN1Q14457 450 aa9.42□□□□□ -0.9
PTPN22-208ENST00000529045 C8orf34Q49A92 452 aa9.42□□□□□ -0.9
PTPN22-208ENST00000529045 TMEM164Q5U3C3 297 aa9.42□□□□□ -0.9
PTPN22-208ENST00000529045 LMTK2Q8IWU2 1503 aa9.41□□□□□ -0.9
PTPN22-208ENST00000529045 PLEKHG1Q9ULL1 1385 aa9.41□□□□□ -0.9
PTPN22-208ENST00000529045 MAPK8IP3Q9UPT6 1336 aa9.41□□□□□ -0.9
PTPN22-208ENST00000529045 ST20-MTHFSA0A0A6YYL1 179 aa9.41□□□□□ -0.9
PTPN22-208ENST00000529045 NCOA4Q13772 614 aa9.41□□□□□ -0.9
PTPN22-208ENST00000529045 CRTC2Q53ET0 693 aaPredicted RBP9.41□□□□□ -0.9
PTPN22-208ENST00000529045 SH3RF1Q7Z6J0 888 aa9.41□□□□□ -0.9
PTPN22-208ENST00000529045 CCDC24Q8N4L8 307 aa9.41□□□□□ -0.9
PTPN22-208ENST00000529045 ARHGAP9Q9BRR9 750 aa9.41□□□□□ -0.9
PTPN22-208ENST00000529045 QTRT2Q9H974 415 aaKnown RBP9.41□□□□□ -0.9
PTPN22-208ENST00000529045 ERBINQ96RT1 1412 aa9.4□□□□□ -0.9
PTPN22-208ENST00000529045 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.4□□□□□ -0.9
PTPN22-208ENST00000529045 ATF3P18847 181 aa9.4□□□□□ -0.9
PTPN22-208ENST00000529045 ZNF697Q5TEC3 545 aa9.4□□□□□ -0.9
PTPN22-208ENST00000529045 ZNF598Q86UK7 904 aaKnown RBP9.4□□□□□ -0.9
PTPN22-208ENST00000529045 SLC26A8Q96RN1 970 aa9.4□□□□□ -0.9
PTPN22-208ENST00000529045 POLR3GLQ9BT43 218 aa9.4□□□□□ -0.9
PTPN22-208ENST00000529045 C19orf44Q9H6X5 657 aa9.4□□□□□ -0.9
PTPN22-208ENST00000529045 PTCH1Q13635 1447 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 MARF1Q9Y4F3 1742 aaKnown RBP9.39□□□□□ -0.91
PTPN22-208ENST00000529045 NPC1L1Q9UHC9 1359 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 ZNF521Q96K83 1311 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 FAM196BA6NMK8 535 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 USP17L15C9J2P7 530 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 USP17L10C9JJH3 530 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 USP17L13C9JLJ4 530 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 USP17L12C9JPN9 530 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 USP17L11C9JVI0 530 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 USP17L21D6R901 530 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 USP17L18D6R9N7 530 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 USP17L22D6RA61 530 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 USP17L17D6RBQ6 530 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 USP17L19D6RCP7 530 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 USP17L20D6RJB6 530 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 MCCD1P59942 119 aaPredicted RBP9.39□□□□□ -0.91
PTPN22-208ENST00000529045 USP17L24Q0WX57 530 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 TSGA10IPQ3SY00 556 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 SLFNL1Q499Z3 407 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 TMCO4Q5TGY1 634 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 RNF135Q8IUD6 432 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 PLPP7Q8NBV4 271 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 LRRC59Q96AG4 307 aaKnown RBP9.39□□□□□ -0.91
PTPN22-208ENST00000529045 MKRN1Q9UHC7 482 aaKnown RBP9.39□□□□□ -0.91
PTPN22-208ENST00000529045 ISY1Q9ULR0 285 aaKnown RBP9.39□□□□□ -0.91
PTPN22-208ENST00000529045 NOVA2Q9UNW9 492 aaKnown RBP9.39□□□□□ -0.91
PTPN22-208ENST00000529045 PIK3C2GO75747 1445 aa9.39□□□□□ -0.91
PTPN22-208ENST00000529045 NUP155O75694 1391 aa9.38□□□□□ -0.91
PTPN22-208ENST00000529045 COL22A1Q8NFW1 1626 aaPredicted RBP9.38□□□□□ -0.91
PTPN22-208ENST00000529045 MYO5BQ9ULV0 1848 aa9.38□□□□□ -0.91
PTPN22-208ENST00000529045 TNFRSF10AO00220 468 aa9.38□□□□□ -0.91
PTPN22-208ENST00000529045 PTK7Q13308 1070 aa9.38□□□□□ -0.91
PTPN22-208ENST00000529045 C4orf48Q5BLP8 95 aa9.38□□□□□ -0.91
PTPN22-208ENST00000529045 C8orf37Q96NL8 207 aa9.38□□□□□ -0.91
PTPN22-208ENST00000529045 TRPC5Q9UL62 973 aaPredicted RBP9.38□□□□□ -0.91
PTPN22-208ENST00000529045 ZFYVE9O95405 1425 aa9.38□□□□□ -0.91
PTPN22-208ENST00000529045 PNPLA6Q8IY17 1366 aa9.37□□□□□ -0.91
PTPN22-208ENST00000529045 TRPM2O94759 1503 aa9.37□□□□□ -0.91
PTPN22-208ENST00000529045 PATL2C9JE40 543 aaKnown RBP9.37□□□□□ -0.91
PTPN22-208ENST00000529045 BRINP3Q76B58 766 aa9.37□□□□□ -0.91
PTPN22-208ENST00000529045 RGS22Q8NE09 1264 aa9.37□□□□□ -0.91
PTPN22-208ENST00000529045 FCF1Q9Y324 198 aaKnown RBP9.37□□□□□ -0.91
PTPN22-208ENST00000529045 IVNS1ABPQ9Y6Y0 642 aa9.37□□□□□ -0.91
PTPN22-208ENST00000529045 ATRNO75882 1429 aa9.37□□□□□ -0.91
PTPN22-208ENST00000529045 KANK1Q14678 1352 aa9.37□□□□□ -0.91
PTPN22-208ENST00000529045 CGNL1Q0VF96 1302 aa9.36□□□□□ -0.91
PTPN22-208ENST00000529045 FRAT2O75474 233 aaPredicted RBP9.36□□□□□ -0.91
PTPN22-208ENST00000529045 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
PTPN22-208ENST00000529045 ZNF326Q5BKZ1 582 aaKnown RBP9.36□□□□□ -0.91
PTPN22-208ENST00000529045 DUSP27Q5VZP5 1158 aa9.36□□□□□ -0.91
PTPN22-208ENST00000529045 TRMT2AQ8IZ69 625 aaKnown RBP9.36□□□□□ -0.91
PTPN22-208ENST00000529045 BAP1Q92560 729 aa9.36□□□□□ -0.91
PTPN22-208ENST00000529045 ZNF592Q92610 1267 aa9.36□□□□□ -0.91
PTPN22-208ENST00000529045 FOXJ1Q92949 421 aa9.36□□□□□ -0.91
PTPN22-208ENST00000529045 CCDC85AQ96PX6 553 aaPredicted RBP9.36□□□□□ -0.91
PTPN22-208ENST00000529045 CARD14Q9BXL6 1004 aa9.36□□□□□ -0.91
PTPN22-208ENST00000529045 NOS1P29475 1434 aa9.36□□□□□ -0.91
PTPN22-208ENST00000529045 IQGAP3Q86VI3 1631 aa9.35□□□□□ -0.91
PTPN22-208ENST00000529045 EIF5BO60841 1220 aaKnown RBP9.35□□□□□ -0.91
PTPN22-208ENST00000529045 MFAP1P55081 439 aaKnown RBP9.35□□□□□ -0.91
PTPN22-208ENST00000529045 TMF1P82094 1093 aa9.35□□□□□ -0.91
PTPN22-208ENST00000529045 PDE3AQ14432 1141 aa9.35□□□□□ -0.91
PTPN22-208ENST00000529045 ERFEQ4G0M1 354 aa9.35□□□□□ -0.91
PTPN22-208ENST00000529045 PHLDB3Q6NSJ2 640 aa9.35□□□□□ -0.91
PTPN22-208ENST00000529045 ZBTB33Q86T24 672 aa9.35□□□□□ -0.91
PTPN22-208ENST00000529045 XRN1Q8IZH2 1706 aaKnown RBP9.35□□□□□ -0.91
PTPN22-208ENST00000529045 TBX22Q9Y458 520 aa9.35□□□□□ -0.91
PTPN22-208ENST00000529045 BCL9LQ86UU0 1499 aa9.34□□□□□ -0.91
PTPN22-208ENST00000529045 MST1RQ04912 1400 aa9.34□□□□□ -0.91
PTPN22-208ENST00000529045 MAGEB6P1A0A0J9YX57 407 aa9.34□□□□□ -0.91
PTPN22-208ENST00000529045 RRP9O43818 475 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms