RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 HACL1Q9UJ83 578 aa20.49■□□□□ 0.87
CTSB-215ENST00000528965 NTSR2O95665 410 aa20.48■□□□□ 0.87
CTSB-215ENST00000528965 EIF2S2P20042 333 aaKnown RBP20.48■□□□□ 0.87
CTSB-215ENST00000528965 TMPOP42166 694 aaKnown RBP20.48■□□□□ 0.87
CTSB-215ENST00000528965 SUSD4Q5VX71 490 aa20.48■□□□□ 0.87
CTSB-215ENST00000528965 TMX4Q9H1E5 349 aaPredicted RBP20.48■□□□□ 0.87
CTSB-215ENST00000528965 RNF123Q5XPI4 1314 aa20.48■□□□□ 0.87
CTSB-215ENST00000528965 SNED1Q8TER0 1413 aa20.47■□□□□ 0.87
CTSB-215ENST00000528965 POTEIP0CG38 1075 aa20.47■□□□□ 0.87
CTSB-215ENST00000528965 POTEJP0CG39 1038 aa20.47■□□□□ 0.87
CTSB-215ENST00000528965 CRAMP1Q96RY5 1269 aa20.47■□□□□ 0.87
CTSB-215ENST00000528965 FZD9O00144 591 aa20.46■□□□□ 0.87
CTSB-215ENST00000528965 PPEF1O14829 653 aaPredicted RBP20.46■□□□□ 0.87
CTSB-215ENST00000528965 EIF6P56537 245 aaKnown RBP20.46■□□□□ 0.87
CTSB-215ENST00000528965 WDR43Q15061 677 aaKnown RBP eCLIP20.46■□□□□ 0.87
CTSB-215ENST00000528965 EAPPQ56P03 285 aaPredicted RBP20.46■□□□□ 0.87
CTSB-215ENST00000528965 HSP90AB3PQ58FF7 597 aa20.46■□□□□ 0.87
CTSB-215ENST00000528965 PNMA8AQ86V59 439 aaPredicted RBP20.46■□□□□ 0.87
CTSB-215ENST00000528965 GPC2Q8N158 579 aa20.46■□□□□ 0.87
CTSB-215ENST00000528965 NLRP3Q96P20 1036 aa20.45■□□□□ 0.86
CTSB-215ENST00000528965 UTP14AQ9BVJ6 771 aaKnown RBP20.45■□□□□ 0.86
CTSB-215ENST00000528965 EPHX2P34913 555 aa20.44■□□□□ 0.86
CTSB-215ENST00000528965 PDIA6Q15084 440 aa20.44■□□□□ 0.86
CTSB-215ENST00000528965 CLEC11AQ9Y240 323 aa20.44■□□□□ 0.86
CTSB-215ENST00000528965 HSPA1AP0DMV8 641 aaKnown RBP20.43■□□□□ 0.86
CTSB-215ENST00000528965 HSPA1BP0DMV9 641 aaKnown RBP20.43■□□□□ 0.86
CTSB-215ENST00000528965 LMOD1P29536 600 aaPredicted RBP20.43■□□□□ 0.86
CTSB-215ENST00000528965 LRP10Q7Z4F1 713 aa20.43■□□□□ 0.86
CTSB-215ENST00000528965 LARGE2Q8N3Y3 721 aa20.43■□□□□ 0.86
CTSB-215ENST00000528965 PASKQ96RG2 1323 aa20.43■□□□□ 0.86
CTSB-215ENST00000528965 RUNDC1Q96C34 613 aa20.42■□□□□ 0.86
CTSB-215ENST00000528965 DDX10Q13206 875 aaKnown RBP20.41■□□□□ 0.86
CTSB-215ENST00000528965 NEUROD2Q15784 382 aa20.41■□□□□ 0.86
CTSB-215ENST00000528965 PROSER3Q2NL68 480 aa20.41■□□□□ 0.86
CTSB-215ENST00000528965 COL13A1Q5TAT6 717 aaPredicted RBP20.41■□□□□ 0.86
CTSB-215ENST00000528965 NIM1KQ8IY84 436 aa20.41■□□□□ 0.86
CTSB-215ENST00000528965 CCDC146Q8IYE0 955 aa20.41■□□□□ 0.86
CTSB-215ENST00000528965 MKRN1Q9UHC7 482 aaKnown RBP20.41■□□□□ 0.86
CTSB-215ENST00000528965 ANKRD36CQ5JPF3 1778 aa20.41■□□□□ 0.86
CTSB-215ENST00000528965 ANXA1P04083 346 aa20.4■□□□□ 0.86
CTSB-215ENST00000528965 CNTNAP1P78357 1384 aa20.4■□□□□ 0.86
CTSB-215ENST00000528965 SLC10A5Q5PT55 438 aa20.4■□□□□ 0.86
CTSB-215ENST00000528965 COPS6Q7L5N1 327 aa20.4■□□□□ 0.86
CTSB-215ENST00000528965 DDX21Q9NR30 783 aaKnown RBP eCLIP20.4■□□□□ 0.86
CTSB-215ENST00000528965 GJA3Q9Y6H8 435 aa20.4■□□□□ 0.86
CTSB-215ENST00000528965 ADAMTSL1Q8N6G6 1762 aa20.39■□□□□ 0.86
CTSB-215ENST00000528965 TMEM88BA6NKF7 163 aa20.39■□□□□ 0.85
CTSB-215ENST00000528965 AIMP1Q12904 312 aaKnown RBP20.39■□□□□ 0.85
CTSB-215ENST00000528965 TNS4Q8IZW8 715 aa20.39■□□□□ 0.85
CTSB-215ENST00000528965 SUPT20HQ8NEM7 779 aa20.39■□□□□ 0.85
CTSB-215ENST00000528965 XAGE3Q8WTP9 111 aa20.39■□□□□ 0.85
CTSB-215ENST00000528965 NECTIN2Q92692 538 aa20.39■□□□□ 0.85
CTSB-215ENST00000528965 VPS33BQ9H267 617 aa20.39■□□□□ 0.85
CTSB-215ENST00000528965 ABCC4O15439 1325 aa20.38■□□□□ 0.85
CTSB-215ENST00000528965 CHL1O00533 1208 aa20.38■□□□□ 0.85
CTSB-215ENST00000528965 TCERG1O14776 1098 aaKnown RBP20.38■□□□□ 0.85
CTSB-215ENST00000528965 PPIP5K2O43314 1243 aa20.38■□□□□ 0.85
CTSB-215ENST00000528965 HOXB7P09629 217 aa20.38■□□□□ 0.85
CTSB-215ENST00000528965 C3orf67Q6ZVT6 689 aa20.38■□□□□ 0.85
CTSB-215ENST00000528965 ATP6V0A2Q9Y487 856 aa20.38■□□□□ 0.85
CTSB-215ENST00000528965 LAS1LQ9Y4W2 734 aaKnown RBP20.38■□□□□ 0.85
CTSB-215ENST00000528965 SH3TC1Q8TE82 1336 aa20.37■□□□□ 0.85
CTSB-215ENST00000528965 ITGBL1O95965 494 aaPredicted RBP20.37■□□□□ 0.85
CTSB-215ENST00000528965 HDGFL1Q5TGJ6 251 aa20.37■□□□□ 0.85
CTSB-215ENST00000528965 NLRP10Q86W26 655 aa20.37■□□□□ 0.85
CTSB-215ENST00000528965 TRMT112Q9UI30 125 aaKnown RBP20.37■□□□□ 0.85
CTSB-215ENST00000528965 COL4A5P29400 1685 aa20.36■□□□□ 0.85
CTSB-215ENST00000528965 BBOX1O75936 387 aa20.36■□□□□ 0.85
CTSB-215ENST00000528965 TCIRG1Q13488 830 aa20.36■□□□□ 0.85
CTSB-215ENST00000528965 DDX46Q7L014 1031 aaKnown RBP20.36■□□□□ 0.85
CTSB-215ENST00000528965 CNTROBQ8N137 903 aa20.35■□□□□ 0.85
CTSB-215ENST00000528965 CHPF2Q9P2E5 772 aa20.35■□□□□ 0.85
CTSB-215ENST00000528965 TRIM35Q9UPQ4 493 aa20.35■□□□□ 0.85
CTSB-215ENST00000528965 MAP1SQ66K74 1059 aaPredicted RBP20.34■□□□□ 0.85
CTSB-215ENST00000528965 DPP8Q6V1X1 898 aaPredicted RBP20.34■□□□□ 0.85
CTSB-215ENST00000528965 TMC4Q7Z404 712 aa20.34■□□□□ 0.85
CTSB-215ENST00000528965 DBF4Q9UBU7 674 aaPredicted RBP20.34■□□□□ 0.85
CTSB-215ENST00000528965 HCLS1P14317 486 aaPredicted RBP20.33■□□□□ 0.85
CTSB-215ENST00000528965 SCNN1DP51172 638 aa20.33■□□□□ 0.85
CTSB-215ENST00000528965 AOC3Q16853 763 aa20.33■□□□□ 0.85
CTSB-215ENST00000528965 SP8Q8IXZ3 490 aa20.33■□□□□ 0.85
CTSB-215ENST00000528965 PLBD2Q8NHP8 589 aa20.33■□□□□ 0.85
CTSB-215ENST00000528965 AIDAQ96BJ3 306 aa20.33■□□□□ 0.85
CTSB-215ENST00000528965 RTFDC1Q9BY42 306 aaPredicted RBP20.33■□□□□ 0.85
CTSB-215ENST00000528965 GRAPQ13588 217 aa20.32■□□□□ 0.84
CTSB-215ENST00000528965 KRT24Q2M2I5 525 aa20.32■□□□□ 0.84
CTSB-215ENST00000528965 USP50Q70EL3 339 aaPredicted RBP20.32■□□□□ 0.84
CTSB-215ENST00000528965 MPNDQ8N594 471 aa20.32■□□□□ 0.84
CTSB-215ENST00000528965 GRAPLQ8TC17 118 aaPredicted RBP20.32■□□□□ 0.84
CTSB-215ENST00000528965 CFAP44Q96MT7 982 aa20.32■□□□□ 0.84
CTSB-215ENST00000528965 ADAMTS8Q9UP79 889 aa20.32■□□□□ 0.84
CTSB-215ENST00000528965 PCNTO95613 3336 aa20.32■□□□□ 0.84
CTSB-215ENST00000528965 CALD1Q05682 793 aaKnown RBP20.31■□□□□ 0.84
CTSB-215ENST00000528965 HYPKQ9NX55 129 aa20.31■□□□□ 0.84
CTSB-215ENST00000528965 ZNRF3Q9ULT6 936 aa20.31■□□□□ 0.84
CTSB-215ENST00000528965 LAMB2P55268 1798 aa20.31■□□□□ 0.84
CTSB-215ENST00000528965 EPS15P42566 896 aa20.3■□□□□ 0.84
CTSB-215ENST00000528965 ANKRD13DQ6ZTN6 518 aa20.3■□□□□ 0.84
CTSB-215ENST00000528965 SLC51AQ86UW1 340 aa20.3■□□□□ 0.84
CTSB-215ENST00000528965 ABT1Q9ULW3 272 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms