RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	GJA3	Q9Y6H8	435 aa		15.03	■□□□□ -0
PTP4A2-211	ENST00000528840	CRY2	Q49AN0	593 aa		15.02	■□□□□ -0
PTP4A2-211	ENST00000528840	MAP1S	Q66K74	1059 aa	Predicted RBP	15.02	■□□□□ -0
PTP4A2-211	ENST00000528840	CC2D2B	Q6DHV5	1058 aa		15.02	■□□□□ -0
PTP4A2-211	ENST00000528840	PNMA8A	Q86V59	439 aa	Predicted RBP	15.02	■□□□□ -0
PTP4A2-211	ENST00000528840	CNTROB	Q8N137	903 aa		15.02	■□□□□ -0
PTP4A2-211	ENST00000528840	PNN	Q9H307	717 aa	Known RBP	15.02	■□□□□ -0
PTP4A2-211	ENST00000528840	RNF123	Q5XPI4	1314 aa		15.01	□□□□□ -0.01
PTP4A2-211	ENST00000528840	HOXA10	P31260	410 aa	Predicted RBP	15.01	□□□□□ -0.01
PTP4A2-211	ENST00000528840	VEGFB	P49765	207 aa		15.01	□□□□□ -0.01
PTP4A2-211	ENST00000528840	EIF6	P56537	245 aa	Known RBP	15.01	□□□□□ -0.01
PTP4A2-211	ENST00000528840	GPC2	Q8N158	579 aa		15.01	□□□□□ -0.01
PTP4A2-211	ENST00000528840	RBM17	Q96I25	401 aa	Known RBP	15.01	□□□□□ -0.01
PTP4A2-211	ENST00000528840	PSMD1	Q99460	953 aa		15.01	□□□□□ -0.01
PTP4A2-211	ENST00000528840	CNTNAP1	P78357	1384 aa		15	□□□□□ -0.01
PTP4A2-211	ENST00000528840	FOXN1	O15353	648 aa		15	□□□□□ -0.01
PTP4A2-211	ENST00000528840	EIF2S2	P20042	333 aa	Known RBP	15	□□□□□ -0.01
PTP4A2-211	ENST00000528840	ZNF34	Q8IZ26	560 aa		15	□□□□□ -0.01
PTP4A2-211	ENST00000528840	ARFGEF2	Q9Y6D5	1785 aa		15	□□□□□ -0.01
PTP4A2-211	ENST00000528840	ABCC12	Q96J65	1359 aa		14.99	□□□□□ -0.01
PTP4A2-211	ENST00000528840	UBN2	Q6ZU65	1347 aa		14.99	□□□□□ -0.01
PTP4A2-211	ENST00000528840	MAPK8IP3	Q9UPT6	1336 aa		14.99	□□□□□ -0.01
PTP4A2-211	ENST00000528840	LARGE2	Q8N3Y3	721 aa		14.99	□□□□□ -0.01
PTP4A2-211	ENST00000528840	CRAMP1	Q96RY5	1269 aa		14.99	□□□□□ -0.01
PTP4A2-211	ENST00000528840	TSPYL4	Q9UJ04	414 aa		14.99	□□□□□ -0.01
PTP4A2-211	ENST00000528840	SCN4A	P35499	1836 aa		14.99	□□□□□ -0.01
PTP4A2-211	ENST00000528840	DEFB115	Q30KQ5	88 aa		14.98	□□□□□ -0.01
PTP4A2-211	ENST00000528840	GRIPAP1	Q4V328	841 aa		14.98	□□□□□ -0.01
PTP4A2-211	ENST00000528840	GIGYF2	Q6Y7W6	1299 aa	Known RBP	14.98	□□□□□ -0.01
PTP4A2-211	ENST00000528840	C3orf67	Q6ZVT6	689 aa		14.98	□□□□□ -0.01
PTP4A2-211	ENST00000528840	PPP1R42	Q7Z4L9	355 aa		14.98	□□□□□ -0.01
PTP4A2-211	ENST00000528840	AIDA	Q96BJ3	306 aa		14.98	□□□□□ -0.01
PTP4A2-211	ENST00000528840	NLRP3	Q96P20	1036 aa		14.98	□□□□□ -0.01
PTP4A2-211	ENST00000528840	PCNT	O95613	3336 aa		14.97	□□□□□ -0.01
PTP4A2-211	ENST00000528840	PPEF1	O14829	653 aa	Predicted RBP	14.97	□□□□□ -0.01
PTP4A2-211	ENST00000528840	LMOD1	P29536	600 aa	Predicted RBP	14.97	□□□□□ -0.01
PTP4A2-211	ENST00000528840	RIPK4	P57078	832 aa		14.97	□□□□□ -0.01
PTP4A2-211	ENST00000528840	SLC51A	Q86UW1	340 aa		14.97	□□□□□ -0.01
PTP4A2-211	ENST00000528840	TMX4	Q9H1E5	349 aa	Predicted RBP	14.97	□□□□□ -0.01
PTP4A2-211	ENST00000528840	NTSR2	O95665	410 aa		14.96	□□□□□ -0.01
PTP4A2-211	ENST00000528840	ANXA1	P04083	346 aa		14.96	□□□□□ -0.01
PTP4A2-211	ENST00000528840	EPS15	P42566	896 aa		14.96	□□□□□ -0.01
PTP4A2-211	ENST00000528840	CTCF	P49711	727 aa	Predicted RBP	14.96	□□□□□ -0.01
PTP4A2-211	ENST00000528840	PDIA6	Q15084	440 aa		14.96	□□□□□ -0.01
PTP4A2-211	ENST00000528840	SLC10A5	Q5PT55	438 aa		14.96	□□□□□ -0.01
PTP4A2-211	ENST00000528840	NECTIN2	Q92692	538 aa		14.96	□□□□□ -0.01
PTP4A2-211	ENST00000528840	UTP14A	Q9BVJ6	771 aa	Known RBP	14.96	□□□□□ -0.01
PTP4A2-211	ENST00000528840	ABT1	Q9ULW3	272 aa	Known RBP	14.96	□□□□□ -0.01
PTP4A2-211	ENST00000528840	NUP98	P52948	1817 aa		14.95	□□□□□ -0.02
PTP4A2-211	ENST00000528840	AIMP1	Q12904	312 aa	Known RBP	14.95	□□□□□ -0.02
PTP4A2-211	ENST00000528840	PARP10	Q53GL7	1025 aa		14.95	□□□□□ -0.02
PTP4A2-211	ENST00000528840	NIM1K	Q8IY84	436 aa		14.95	□□□□□ -0.02
PTP4A2-211	ENST00000528840	PRDM10	Q9NQV6	1147 aa		14.95	□□□□□ -0.02
PTP4A2-211	ENST00000528840	ERBB4	Q15303	1308 aa		14.94	□□□□□ -0.02
PTP4A2-211	ENST00000528840	DLG5	Q8TDM6	1919 aa		14.94	□□□□□ -0.02
PTP4A2-211	ENST00000528840	PPIP5K2	O43314	1243 aa		14.94	□□□□□ -0.02
PTP4A2-211	ENST00000528840	SCNN1D	P51172	638 aa		14.94	□□□□□ -0.02
PTP4A2-211	ENST00000528840	CACNB1	Q02641	598 aa	Predicted RBP	14.94	□□□□□ -0.02
PTP4A2-211	ENST00000528840	FMR1	Q06787	632 aa	Known RBP eCLIP	14.94	□□□□□ -0.02
PTP4A2-211	ENST00000528840	PROSER3	Q2NL68	480 aa		14.94	□□□□□ -0.02
PTP4A2-211	ENST00000528840	COPS6	Q7L5N1	327 aa		14.94	□□□□□ -0.02
PTP4A2-211	ENST00000528840	DDX21	Q9NR30	783 aa	Known RBP eCLIP	14.94	□□□□□ -0.02
PTP4A2-211	ENST00000528840	WBP1L	Q9NX94	342 aa		14.94	□□□□□ -0.02
PTP4A2-211	ENST00000528840	ATP6V0A2	Q9Y487	856 aa		14.94	□□□□□ -0.02
PTP4A2-211	ENST00000528840	WDR33	Q9C0J8	1336 aa	Known RBP	14.93	□□□□□ -0.02
PTP4A2-211	ENST00000528840	SNED1	Q8TER0	1413 aa		14.93	□□□□□ -0.02
PTP4A2-211	ENST00000528840	RASSF10	A6NK89	507 aa		14.93	□□□□□ -0.02
PTP4A2-211	ENST00000528840	LBX1	P52954	281 aa		14.93	□□□□□ -0.02
PTP4A2-211	ENST00000528840	AOC3	Q16853	763 aa		14.93	□□□□□ -0.02
PTP4A2-211	ENST00000528840	LRP10	Q7Z4F1	713 aa		14.93	□□□□□ -0.02
PTP4A2-211	ENST00000528840	IBTK	Q9P2D0	1353 aa	Predicted RBP	14.93	□□□□□ -0.02
PTP4A2-211	ENST00000528840	BBOX1	O75936	387 aa		14.92	□□□□□ -0.02
PTP4A2-211	ENST00000528840	SLC4A2	P04920	1241 aa		14.92	□□□□□ -0.02
PTP4A2-211	ENST00000528840	HCLS1	P14317	486 aa	Predicted RBP	14.92	□□□□□ -0.02
PTP4A2-211	ENST00000528840	TMPO	P42166	694 aa	Known RBP	14.92	□□□□□ -0.02
PTP4A2-211	ENST00000528840	NEUROD2	Q15784	382 aa		14.92	□□□□□ -0.02
PTP4A2-211	ENST00000528840	USP50	Q70EL3	339 aa	Predicted RBP	14.92	□□□□□ -0.02
PTP4A2-211	ENST00000528840	ZNF428	Q96B54	188 aa		14.92	□□□□□ -0.02
PTP4A2-211	ENST00000528840	LAMB4	A4D0S4	1761 aa		14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	KDM3B	Q7LBC6	1761 aa		14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	COL4A5	P29400	1685 aa		14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	TRAF5	O00463	557 aa		14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	CXCL9	Q07325	125 aa		14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	GRM1	Q13255	1194 aa		14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	SP8	Q8IXZ3	490 aa		14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	SUPT20H	Q8NEM7	779 aa		14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	XAGE3	Q8WTP9	111 aa		14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	VPS33B	Q9H267	617 aa		14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	BABAM1	Q9NWV8	329 aa		14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	ZNRF3	Q9ULT6	936 aa		14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	LAS1L	Q9Y4W2	734 aa	Known RBP	14.91	□□□□□ -0.02
PTP4A2-211	ENST00000528840	MAP2K1	Q02750	393 aa	Predicted RBP	14.9	□□□□□ -0.02
PTP4A2-211	ENST00000528840	TCIRG1	Q13488	830 aa		14.9	□□□□□ -0.02
PTP4A2-211	ENST00000528840	HSP90AB3P	Q58FF7	597 aa		14.9	□□□□□ -0.02
PTP4A2-211	ENST00000528840	CST9	Q5W186	159 aa		14.9	□□□□□ -0.02
PTP4A2-211	ENST00000528840	DPP8	Q6V1X1	898 aa	Predicted RBP	14.9	□□□□□ -0.02
PTP4A2-211	ENST00000528840	NLRP10	Q86W26	655 aa		14.9	□□□□□ -0.02
PTP4A2-211	ENST00000528840	MPND	Q8N594	471 aa		14.9	□□□□□ -0.02
PTP4A2-211	ENST00000528840	TRMT112	Q9UI30	125 aa	Known RBP	14.9	□□□□□ -0.02

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms