RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 USP31Q70CQ4 1352 aa9.15□□□□□ -0.94
FDFT1-213ENST00000528729 USP5P45974 858 aa9.15□□□□□ -0.94
FDFT1-213ENST00000528729 CDKN1CP49918 316 aaPredicted RBP9.15□□□□□ -0.94
FDFT1-213ENST00000528729 OXLD1Q5BKU9 147 aa9.15□□□□□ -0.94
FDFT1-213ENST00000528729 LILRB2Q8N423 598 aa9.15□□□□□ -0.94
FDFT1-213ENST00000528729 TSEN2Q8NCE0 465 aaKnown RBP9.15□□□□□ -0.94
FDFT1-213ENST00000528729 NRBP1Q9UHY1 535 aa9.15□□□□□ -0.94
FDFT1-213ENST00000528729 SPG7Q9UQ90 795 aa9.15□□□□□ -0.94
FDFT1-213ENST00000528729 NEFMP07197 916 aa9.14□□□□□ -0.95
FDFT1-213ENST00000528729 COL6A1P12109 1028 aa9.14□□□□□ -0.95
FDFT1-213ENST00000528729 ETFBP38117 255 aa9.14□□□□□ -0.95
FDFT1-213ENST00000528729 MAPRE1Q15691 268 aaKnown RBP9.14□□□□□ -0.95
FDFT1-213ENST00000528729 EFCAB2Q5VUJ9 269 aa9.14□□□□□ -0.95
FDFT1-213ENST00000528729 PPP4R4Q6NUP7 873 aa9.14□□□□□ -0.95
FDFT1-213ENST00000528729 PAGR1Q9BTK6 254 aa9.14□□□□□ -0.95
FDFT1-213ENST00000528729 INO80BQ9C086 356 aaPredicted RBP9.14□□□□□ -0.95
FDFT1-213ENST00000528729 STRIP2Q9ULQ0 834 aa9.14□□□□□ -0.95
FDFT1-213ENST00000528729 ATP8A1Q9Y2Q0 1164 aa9.14□□□□□ -0.95
FDFT1-213ENST00000528729 PCDHGA4Q9Y5G9 962 aa9.14□□□□□ -0.95
FDFT1-213ENST00000528729 ERBB3P21860 1342 aa9.13□□□□□ -0.95
FDFT1-213ENST00000528729 ESPNB1AK53 854 aa9.13□□□□□ -0.95
FDFT1-213ENST00000528729 F12P00748 615 aaPredicted RBP9.13□□□□□ -0.95
FDFT1-213ENST00000528729 FUT2Q10981 343 aa9.13□□□□□ -0.95
FDFT1-213ENST00000528729 ERMP1Q7Z2K6 904 aa9.13□□□□□ -0.95
FDFT1-213ENST00000528729 V9GY48 417 aaPredicted RBP9.13□□□□□ -0.95
FDFT1-213ENST00000528729 RAD54L2Q9Y4B4 1467 aa9.13□□□□□ -0.95
FDFT1-213ENST00000528729 ANP32CO43423 234 aa9.12□□□□□ -0.95
FDFT1-213ENST00000528729 ALDH1L1O75891 902 aa9.12□□□□□ -0.95
FDFT1-213ENST00000528729 BPNT1O95861 308 aa9.12□□□□□ -0.95
FDFT1-213ENST00000528729 CD44P16070 742 aaKnown RBP9.12□□□□□ -0.95
FDFT1-213ENST00000528729 COPB2P35606 906 aa9.12□□□□□ -0.95
FDFT1-213ENST00000528729 RAPGEF1Q13905 1077 aa9.12□□□□□ -0.95
FDFT1-213ENST00000528729 C16orf46Q6P387 395 aa9.12□□□□□ -0.95
FDFT1-213ENST00000528729 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.12□□□□□ -0.95
FDFT1-213ENST00000528729 JAMLQ86YT9 394 aa9.12□□□□□ -0.95
FDFT1-213ENST00000528729 CCDC113Q9H0I3 377 aa9.12□□□□□ -0.95
FDFT1-213ENST00000528729 CHST12Q9NRB3 414 aa9.12□□□□□ -0.95
FDFT1-213ENST00000528729 ARHGEF11O15085 1522 aa9.11□□□□□ -0.95
FDFT1-213ENST00000528729 PMLP29590 882 aa9.11□□□□□ -0.95
FDFT1-213ENST00000528729 SLC4A3P48751 1232 aa9.11□□□□□ -0.95
FDFT1-213ENST00000528729 NASPP49321 788 aaPredicted RBP9.11□□□□□ -0.95
FDFT1-213ENST00000528729 TTF1Q15361 905 aaPredicted RBP9.11□□□□□ -0.95
FDFT1-213ENST00000528729 PDXDC2PQ6P474 469 aa9.11□□□□□ -0.95
FDFT1-213ENST00000528729 HNRNPLLQ8WVV9 542 aaKnown RBP9.11□□□□□ -0.95
FDFT1-213ENST00000528729 RUNDC1Q96C34 613 aa9.11□□□□□ -0.95
FDFT1-213ENST00000528729 DNAJC7Q99615 494 aa9.11□□□□□ -0.95
FDFT1-213ENST00000528729 OCSTAMPQ9BR26 566 aa9.11□□□□□ -0.95
FDFT1-213ENST00000528729 MSRB2Q9Y3D2 182 aa9.11□□□□□ -0.95
FDFT1-213ENST00000528729 PRDM2Q13029 1718 aa9.11□□□□□ -0.95
FDFT1-213ENST00000528729 TARBP1Q13395 1621 aaKnown RBP9.1□□□□□ -0.95
FDFT1-213ENST00000528729 ALG1L2C9J202 215 aa9.1□□□□□ -0.95
FDFT1-213ENST00000528729 KCNQ2O43526 872 aa9.1□□□□□ -0.95
FDFT1-213ENST00000528729 CDC27P30260 824 aa9.1□□□□□ -0.95
FDFT1-213ENST00000528729 ST13P50502 369 aaKnown RBP9.1□□□□□ -0.95
FDFT1-213ENST00000528729 POU5F1Q01860 360 aaKnown RBP9.1□□□□□ -0.95
FDFT1-213ENST00000528729 GJD3Q8N144 294 aa9.1□□□□□ -0.95
FDFT1-213ENST00000528729 GPKOWQ92917 476 aaPredicted RBP eCLIP9.1□□□□□ -0.956e-8■■■■□ 22.1
FDFT1-213ENST00000528729 CSRNP1Q96S65 589 aa9.1□□□□□ -0.95
FDFT1-213ENST00000528729 ARHGEF10LQ9HCE6 1279 aa9.1□□□□□ -0.95
FDFT1-213ENST00000528729 GRIN2BQ13224 1484 aa9.09□□□□□ -0.95
FDFT1-213ENST00000528729 EPB41L2O43491 1005 aaKnown RBP9.09□□□□□ -0.95
FDFT1-213ENST00000528729 COL9A1P20849 921 aa9.09□□□□□ -0.95
FDFT1-213ENST00000528729 SQSTM1Q13501 440 aa9.09□□□□□ -0.95
FDFT1-213ENST00000528729 TAF1CQ15572 869 aaPredicted RBP9.09□□□□□ -0.95
FDFT1-213ENST00000528729 TKFCQ3LXA3 575 aa9.09□□□□□ -0.95
FDFT1-213ENST00000528729 RINLQ6ZS11 566 aa9.09□□□□□ -0.95
FDFT1-213ENST00000528729 PACS2Q86VP3 889 aa9.09□□□□□ -0.95
FDFT1-213ENST00000528729 SDR16C5Q8N3Y7 309 aa9.09□□□□□ -0.95
FDFT1-213ENST00000528729 PAF1Q8N7H5 531 aa9.09□□□□□ -0.95
FDFT1-213ENST00000528729 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.09□□□□□ -0.95
FDFT1-213ENST00000528729 SVIPQ8NHG7 77 aa9.09□□□□□ -0.95
FDFT1-213ENST00000528729 SAP130Q9H0E3 1048 aa9.09□□□□□ -0.95
FDFT1-213ENST00000528729 ENAMQ9NRM1 1142 aa9.09□□□□□ -0.95
FDFT1-213ENST00000528729 STIM2Q9P246 746 aa9.09□□□□□ -0.95
FDFT1-213ENST00000528729 R3HCC1Q9Y3T6 440 aaKnown RBP9.09□□□□□ -0.95
FDFT1-213ENST00000528729 MRVI1Q9Y6F6 885 aa9.09□□□□□ -0.95
FDFT1-213ENST00000528729 FGD5Q6ZNL6 1462 aa9.08□□□□□ -0.96
FDFT1-213ENST00000528729 CCDC85CA6NKD9 419 aa9.08□□□□□ -0.96
FDFT1-213ENST00000528729 ATF3P18847 181 aa9.08□□□□□ -0.96
FDFT1-213ENST00000528729 CALRP27797 417 aaKnown RBP9.08□□□□□ -0.96
FDFT1-213ENST00000528729 ATP6V1AP38606 617 aa9.08□□□□□ -0.96
FDFT1-213ENST00000528729 IFRD2Q12894 506 aaPredicted RBP9.08□□□□□ -0.96
FDFT1-213ENST00000528729 TMEM95Q3KNT9 176 aa9.08□□□□□ -0.96
FDFT1-213ENST00000528729 GAS2L2Q8NHY3 880 aa9.08□□□□□ -0.96
FDFT1-213ENST00000528729 ZHX3Q9H4I2 956 aa9.08□□□□□ -0.96
FDFT1-213ENST00000528729 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.08□□□□□ -0.962e-7■■■□□ 16.6
FDFT1-213ENST00000528729 PRKAG3Q9UGI9 489 aa9.08□□□□□ -0.96
FDFT1-213ENST00000528729 MAGI1Q96QZ7 1491 aaPredicted RBP9.08□□□□□ -0.96
FDFT1-213ENST00000528729 RIMBP3CA6NJZ7 1639 aa9.07□□□□□ -0.96
FDFT1-213ENST00000528729 RIMBP3BA6NNM3 1639 aa9.07□□□□□ -0.96
FDFT1-213ENST00000528729 RIMBP3Q9UFD9 1639 aa9.07□□□□□ -0.96
FDFT1-213ENST00000528729 NPHP1O15259 732 aa9.07□□□□□ -0.96
FDFT1-213ENST00000528729 POU3F3P20264 500 aaPredicted RBP9.07□□□□□ -0.96
FDFT1-213ENST00000528729 CNGA1P29973 690 aa9.07□□□□□ -0.96
FDFT1-213ENST00000528729 CTHP32929 405 aa9.07□□□□□ -0.96
FDFT1-213ENST00000528729 IER5LQ5T953 404 aa9.07□□□□□ -0.96
FDFT1-213ENST00000528729 PDILTQ8N807 584 aa9.07□□□□□ -0.96
FDFT1-213ENST00000528729 SPON2Q9BUD6 331 aa9.07□□□□□ -0.96
FDFT1-213ENST00000528729 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.07□□□□□ -0.96
FDFT1-213ENST00000528729 MAP10Q9P2G4 905 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms