RNA–Protein interactions for RNA: ENST00000527959.1

BBS1-213, Transcript of Bardet-Biedl syndrome 1, humanhuman

TSL 2

Gene BBS1, Length 734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1-213ENST00000527959 CRAMP1Q96RY5 1269 aa17.23■□□□□ 0.35
BBS1-213ENST00000527959 ZNF277Q9NRM2 450 aaPredicted RBP17.23■□□□□ 0.35
BBS1-213ENST00000527959 FZD9O00144 591 aa17.22■□□□□ 0.35
BBS1-213ENST00000527959 SLC10A5Q5PT55 438 aa17.22■□□□□ 0.35
BBS1-213ENST00000527959 SYNE4Q8N205 404 aa17.22■□□□□ 0.35
BBS1-213ENST00000527959 RPGRQ92834 1020 aaKnown RBP17.22■□□□□ 0.35
BBS1-213ENST00000527959 RUNDC1Q96C34 613 aa17.22■□□□□ 0.35
BBS1-213ENST00000527959 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
BBS1-213ENST00000527959 IARSP41252 1262 aaKnown RBP17.21■□□□□ 0.35
BBS1-213ENST00000527959 PROSER3Q2NL68 480 aa17.21■□□□□ 0.35
BBS1-213ENST00000527959 TRIM35Q9UPQ4 493 aa17.21■□□□□ 0.35
BBS1-213ENST00000527959 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.34
BBS1-213ENST00000527959 RBM17Q96I25 401 aaKnown RBP17.2■□□□□ 0.34
BBS1-213ENST00000527959 TAF1DQ9H5J8 278 aaPredicted RBP17.2■□□□□ 0.34
BBS1-213ENST00000527959 ANKRD36CQ5JPF3 1778 aa17.2■□□□□ 0.34
BBS1-213ENST00000527959 ZNF541Q9H0D2 1346 aa17.2■□□□□ 0.34
BBS1-213ENST00000527959 POTEIP0CG38 1075 aa17.19■□□□□ 0.34
BBS1-213ENST00000527959 POTEJP0CG39 1038 aa17.19■□□□□ 0.34
BBS1-213ENST00000527959 WDR43Q15061 677 aaKnown RBP eCLIP17.19■□□□□ 0.34
BBS1-213ENST00000527959 LDHDQ86WU2 507 aa17.19■□□□□ 0.34
BBS1-213ENST00000527959 CCDC146Q8IYE0 955 aa17.19■□□□□ 0.34
BBS1-213ENST00000527959 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
BBS1-213ENST00000527959 DDX21Q9NR30 783 aaKnown RBP eCLIP17.19■□□□□ 0.34
BBS1-213ENST00000527959 NEUROD2Q15784 382 aa17.18■□□□□ 0.34
BBS1-213ENST00000527959 HSP90AB3PQ58FF7 597 aa17.18■□□□□ 0.34
BBS1-213ENST00000527959 COPS6Q7L5N1 327 aa17.18■□□□□ 0.34
BBS1-213ENST00000527959 GPC2Q8N158 579 aa17.18■□□□□ 0.34
BBS1-213ENST00000527959 JDP2Q8WYK2 163 aa17.18■□□□□ 0.34
BBS1-213ENST00000527959 NLRP3Q96P20 1036 aa17.18■□□□□ 0.34
BBS1-213ENST00000527959 CREBZFQ9NS37 354 aa17.18■□□□□ 0.34
BBS1-213ENST00000527959 ADAMTS8Q9UP79 889 aa17.18■□□□□ 0.34
BBS1-213ENST00000527959 ANXA1P04083 346 aa17.17■□□□□ 0.34
BBS1-213ENST00000527959 HOXB7P09629 217 aa17.17■□□□□ 0.34
BBS1-213ENST00000527959 C3orf67Q6ZVT6 689 aa17.17■□□□□ 0.34
BBS1-213ENST00000527959 HACL1Q9UJ83 578 aa17.17■□□□□ 0.34
BBS1-213ENST00000527959 ADAMTSL1Q8N6G6 1762 aa17.17■□□□□ 0.34
BBS1-213ENST00000527959 PASKQ96RG2 1323 aa17.17■□□□□ 0.34
BBS1-213ENST00000527959 PPEF1O14829 653 aaPredicted RBP17.16■□□□□ 0.34
BBS1-213ENST00000527959 TCIRG1Q13488 830 aa17.16■□□□□ 0.34
BBS1-213ENST00000527959 PNMA8AQ86V59 439 aaPredicted RBP17.16■□□□□ 0.34
BBS1-213ENST00000527959 XAGE3Q8WTP9 111 aa17.16■□□□□ 0.34
BBS1-213ENST00000527959 VPS33BQ9H267 617 aa17.16■□□□□ 0.34
BBS1-213ENST00000527959 PRKRIP1Q9H875 184 aaPredicted RBP17.16■□□□□ 0.34
BBS1-213ENST00000527959 COL4A5P29400 1685 aa17.16■□□□□ 0.34
BBS1-213ENST00000527959 NLRP10Q86W26 655 aa17.15■□□□□ 0.34
BBS1-213ENST00000527959 CFAP44Q96MT7 982 aa17.15■□□□□ 0.34
BBS1-213ENST00000527959 ATP6V0A2Q9Y487 856 aa17.15■□□□□ 0.34
BBS1-213ENST00000527959 LAMB2P55268 1798 aa17.15■□□□□ 0.34
BBS1-213ENST00000527959 ITGBL1O95965 494 aaPredicted RBP17.14■□□□□ 0.33
BBS1-213ENST00000527959 EPHX2P34913 555 aa17.14■□□□□ 0.33
BBS1-213ENST00000527959 AIMP1Q12904 312 aaKnown RBP17.14■□□□□ 0.33
BBS1-213ENST00000527959 KRT24Q2M2I5 525 aa17.14■□□□□ 0.33
BBS1-213ENST00000527959 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
BBS1-213ENST00000527959 BBOX1O75936 387 aa17.13■□□□□ 0.33
BBS1-213ENST00000527959 EIF6P56537 245 aaKnown RBP17.13■□□□□ 0.33
BBS1-213ENST00000527959 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
BBS1-213ENST00000527959 DBF4Q9UBU7 674 aaPredicted RBP17.13■□□□□ 0.33
BBS1-213ENST00000527959 LAS1LQ9Y4W2 734 aaKnown RBP17.13■□□□□ 0.33
BBS1-213ENST00000527959 HDGFL1Q5TGJ6 251 aa17.12■□□□□ 0.33
BBS1-213ENST00000527959 LARGE2Q8N3Y3 721 aa17.12■□□□□ 0.33
BBS1-213ENST00000527959 PLBD2Q8NHP8 589 aa17.12■□□□□ 0.33
BBS1-213ENST00000527959 RTFDC1Q9BY42 306 aaPredicted RBP17.12■□□□□ 0.33
BBS1-213ENST00000527959 TMX4Q9H1E5 349 aaPredicted RBP17.12■□□□□ 0.33
BBS1-213ENST00000527959 TRMT112Q9UI30 125 aaKnown RBP17.12■□□□□ 0.33
BBS1-213ENST00000527959 ABCC4O15439 1325 aa17.12■□□□□ 0.33
BBS1-213ENST00000527959 SH3TC1Q8TE82 1336 aa17.12■□□□□ 0.33
BBS1-213ENST00000527959 ZNF853P0CG23 659 aa17.11■□□□□ 0.33
BBS1-213ENST00000527959 EAPPQ56P03 285 aaPredicted RBP17.11■□□□□ 0.33
BBS1-213ENST00000527959 ANKRD13DQ6ZTN6 518 aa17.11■□□□□ 0.33
BBS1-213ENST00000527959 SP8Q8IXZ3 490 aa17.11■□□□□ 0.33
BBS1-213ENST00000527959 HCLS1P14317 486 aaPredicted RBP17.1■□□□□ 0.33
BBS1-213ENST00000527959 COL13A1Q5TAT6 717 aaPredicted RBP17.1■□□□□ 0.33
BBS1-213ENST00000527959 SLC51AQ86UW1 340 aa17.1■□□□□ 0.33
BBS1-213ENST00000527959 SUPT20HQ8NEM7 779 aa17.1■□□□□ 0.33
BBS1-213ENST00000527959 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
BBS1-213ENST00000527959 TMEM88BA6NKF7 163 aa17.09■□□□□ 0.33
BBS1-213ENST00000527959 TCERG1O14776 1098 aaKnown RBP17.09■□□□□ 0.33
BBS1-213ENST00000527959 DUSP27Q5VZP5 1158 aa17.09■□□□□ 0.33
BBS1-213ENST00000527959 TMC4Q7Z404 712 aa17.09■□□□□ 0.33
BBS1-213ENST00000527959 NIM1KQ8IY84 436 aa17.09■□□□□ 0.33
BBS1-213ENST00000527959 ISCA1Q9BUE6 129 aa17.09■□□□□ 0.33
BBS1-213ENST00000527959 MBIPQ9NS73 344 aa17.09■□□□□ 0.33
BBS1-213ENST00000527959 CLEC11AQ9Y240 323 aa17.09■□□□□ 0.33
BBS1-213ENST00000527959 CNTNAP1P78357 1384 aa17.09■□□□□ 0.33
BBS1-213ENST00000527959 LTBP1Q14766 1721 aa17.09■□□□□ 0.33
BBS1-213ENST00000527959 DDX60Q8IY21 1712 aaKnown RBP17.08■□□□□ 0.32
BBS1-213ENST00000527959 PPIP5K2O43314 1243 aa17.08■□□□□ 0.32
BBS1-213ENST00000527959 HSPA1AP0DMV8 641 aaKnown RBP17.08■□□□□ 0.32
BBS1-213ENST00000527959 HSPA1BP0DMV9 641 aaKnown RBP17.08■□□□□ 0.32
BBS1-213ENST00000527959 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.32
BBS1-213ENST00000527959 SCNN1DP51172 638 aa17.08■□□□□ 0.32
BBS1-213ENST00000527959 TRIM28Q13263 835 aaKnown RBP17.08■□□□□ 0.32
BBS1-213ENST00000527959 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.32
BBS1-213ENST00000527959 CNTROBQ8N137 903 aa17.08■□□□□ 0.32
BBS1-213ENST00000527959 GJA3Q9Y6H8 435 aa17.08■□□□□ 0.32
BBS1-213ENST00000527959 CALD1Q05682 793 aaKnown RBP17.07■□□□□ 0.32
BBS1-213ENST00000527959 GRAPQ13588 217 aa17.07■□□□□ 0.32
BBS1-213ENST00000527959 AOC3Q16853 763 aa17.07■□□□□ 0.32
BBS1-213ENST00000527959 GRAPLQ8TC17 118 aaPredicted RBP17.07■□□□□ 0.32
BBS1-213ENST00000527959 IFT57Q9NWB7 429 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms