RNA–Protein interactions for RNA: ENST00000527745.3

FGFR1-232, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 790 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-232ENST00000527745 PROSER3Q2NL68 480 aa9.24□□□□□ -0.93
FGFR1-232ENST00000527745 CHADLQ6NUI6 762 aa9.24□□□□□ -0.93
FGFR1-232ENST00000527745 GIGYF2Q6Y7W6 1299 aaKnown RBP9.24□□□□□ -0.93
FGFR1-232ENST00000527745 LRP10Q7Z4F1 713 aa9.24□□□□□ -0.93
FGFR1-232ENST00000527745 ZNF34Q8IZ26 560 aa9.24□□□□□ -0.93
FGFR1-232ENST00000527745 L3MBTL3Q96JM7 780 aaPredicted RBP9.24□□□□□ -0.93
FGFR1-232ENST00000527745 BABAM1Q9NWV8 329 aa9.24□□□□□ -0.93
FGFR1-232ENST00000527745 DDX60Q8IY21 1712 aaKnown RBP9.23□□□□□ -0.93
FGFR1-232ENST00000527745 PDIA6Q15084 440 aa9.23□□□□□ -0.93
FGFR1-232ENST00000527745 PARP10Q53GL7 1025 aa9.23□□□□□ -0.93
FGFR1-232ENST00000527745 CC2D2BQ6DHV5 1058 aa9.23□□□□□ -0.93
FGFR1-232ENST00000527745 PPP1R42Q7Z4L9 355 aa9.23□□□□□ -0.93
FGFR1-232ENST00000527745 LDHDQ86WU2 507 aa9.23□□□□□ -0.93
FGFR1-232ENST00000527745 SYNE4Q8N205 404 aa9.23□□□□□ -0.93
FGFR1-232ENST00000527745 NECTIN2Q92692 538 aa9.23□□□□□ -0.93
FGFR1-232ENST00000527745 PSMD1Q99460 953 aa9.23□□□□□ -0.93
FGFR1-232ENST00000527745 TAF1DQ9H5J8 278 aaPredicted RBP9.23□□□□□ -0.93
FGFR1-232ENST00000527745 TAF1P21675 1872 aa9.23□□□□□ -0.93
FGFR1-232ENST00000527745 PPEF1O14829 653 aaPredicted RBP9.22□□□□□ -0.93
FGFR1-232ENST00000527745 HOXA10P31260 410 aaPredicted RBP9.22□□□□□ -0.93
FGFR1-232ENST00000527745 KRT24Q2M2I5 525 aa9.22□□□□□ -0.93
FGFR1-232ENST00000527745 EAPPQ56P03 285 aaPredicted RBP9.22□□□□□ -0.93
FGFR1-232ENST00000527745 C3orf67Q6ZVT6 689 aa9.22□□□□□ -0.93
FGFR1-232ENST00000527745 JDP2Q8WYK2 163 aa9.22□□□□□ -0.93
FGFR1-232ENST00000527745 RUNDC1Q96C34 613 aa9.22□□□□□ -0.93
FGFR1-232ENST00000527745 RBM17Q96I25 401 aaKnown RBP9.22□□□□□ -0.93
FGFR1-232ENST00000527745 UTP14AQ9BVJ6 771 aaKnown RBP9.22□□□□□ -0.93
FGFR1-232ENST00000527745 LAS1LQ9Y4W2 734 aaKnown RBP9.22□□□□□ -0.93
FGFR1-232ENST00000527745 RNF123Q5XPI4 1314 aa9.22□□□□□ -0.93
FGFR1-232ENST00000527745 LTBP1Q14766 1721 aa9.22□□□□□ -0.93
FGFR1-232ENST00000527745 FZD9O00144 591 aa9.21□□□□□ -0.94
FGFR1-232ENST00000527745 TCERG1O14776 1098 aaKnown RBP9.21□□□□□ -0.94
FGFR1-232ENST00000527745 EPHX2P34913 555 aa9.21□□□□□ -0.94
FGFR1-232ENST00000527745 AIMP1Q12904 312 aaKnown RBP9.21□□□□□ -0.94
FGFR1-232ENST00000527745 HSP90AB3PQ58FF7 597 aa9.21□□□□□ -0.94
FGFR1-232ENST00000527745 COPS6Q7L5N1 327 aa9.21□□□□□ -0.94
FGFR1-232ENST00000527745 SLC51AQ86UW1 340 aa9.21□□□□□ -0.94
FGFR1-232ENST00000527745 GPC2Q8N158 579 aa9.21□□□□□ -0.94
FGFR1-232ENST00000527745 XAGE3Q8WTP9 111 aa9.21□□□□□ -0.94
FGFR1-232ENST00000527745 NLRP3Q96P20 1036 aa9.21□□□□□ -0.94
FGFR1-232ENST00000527745 CRAMP1Q96RY5 1269 aa9.21□□□□□ -0.94
FGFR1-232ENST00000527745 CREBZFQ9NS37 354 aa9.21□□□□□ -0.94
FGFR1-232ENST00000527745 HACL1Q9UJ83 578 aa9.21□□□□□ -0.94
FGFR1-232ENST00000527745 LRRC37AA6NMS7 1700 aa9.21□□□□□ -0.94
FGFR1-232ENST00000527745 CHL1O00533 1208 aa9.2□□□□□ -0.94
FGFR1-232ENST00000527745 HSPA1AP0DMV8 641 aaKnown RBP9.2□□□□□ -0.94
FGFR1-232ENST00000527745 HSPA1BP0DMV9 641 aaKnown RBP9.2□□□□□ -0.94
FGFR1-232ENST00000527745 EIF6P56537 245 aaKnown RBP9.2□□□□□ -0.94
FGFR1-232ENST00000527745 GRIPAP1Q4V328 841 aa9.2□□□□□ -0.94
FGFR1-232ENST00000527745 LARGE2Q8N3Y3 721 aa9.2□□□□□ -0.94
FGFR1-232ENST00000527745 TMX4Q9H1E5 349 aaPredicted RBP9.2□□□□□ -0.94
FGFR1-232ENST00000527745 DDX21Q9NR30 783 aaKnown RBP eCLIP9.2□□□□□ -0.94
FGFR1-232ENST00000527745 CHPF2Q9P2E5 772 aa9.2□□□□□ -0.94
FGFR1-232ENST00000527745 MKRN1Q9UHC7 482 aaKnown RBP9.2□□□□□ -0.94
FGFR1-232ENST00000527745 TRIM35Q9UPQ4 493 aa9.2□□□□□ -0.94
FGFR1-232ENST00000527745 CLEC11AQ9Y240 323 aa9.2□□□□□ -0.94
FGFR1-232ENST00000527745 GJA3Q9Y6H8 435 aa9.2□□□□□ -0.94
FGFR1-232ENST00000527745 ABCC4O15439 1325 aa9.2□□□□□ -0.94
FGFR1-232ENST00000527745 TRPM7Q96QT4 1865 aa9.19□□□□□ -0.94
FGFR1-232ENST00000527745 HDGFL1Q5TGJ6 251 aa9.19□□□□□ -0.94
FGFR1-232ENST00000527745 NLRP10Q86W26 655 aa9.19□□□□□ -0.94
FGFR1-232ENST00000527745 NIM1KQ8IY84 436 aa9.19□□□□□ -0.94
FGFR1-232ENST00000527745 ADAMTS8Q9UP79 889 aa9.19□□□□□ -0.94
FGFR1-232ENST00000527745 PASKQ96RG2 1323 aa9.19□□□□□ -0.94
FGFR1-232ENST00000527745 PPIP5K2O43314 1243 aa9.18□□□□□ -0.94
FGFR1-232ENST00000527745 HOXB7P09629 217 aa9.18□□□□□ -0.94
FGFR1-232ENST00000527745 HCLS1P14317 486 aaPredicted RBP9.18□□□□□ -0.94
FGFR1-232ENST00000527745 LMOD1P29536 600 aaPredicted RBP9.18□□□□□ -0.94
FGFR1-232ENST00000527745 CNTNAP1P78357 1384 aa9.18□□□□□ -0.94
FGFR1-232ENST00000527745 TCIRG1Q13488 830 aa9.18□□□□□ -0.94
FGFR1-232ENST00000527745 SLC10A5Q5PT55 438 aa9.18□□□□□ -0.94
FGFR1-232ENST00000527745 COL13A1Q5TAT6 717 aaPredicted RBP9.18□□□□□ -0.94
FGFR1-232ENST00000527745 PNMA8AQ86V59 439 aaPredicted RBP9.18□□□□□ -0.94
FGFR1-232ENST00000527745 SH3TC1Q8TE82 1336 aa9.18□□□□□ -0.94
FGFR1-232ENST00000527745 PRKRIP1Q9H875 184 aaPredicted RBP9.18□□□□□ -0.94
FGFR1-232ENST00000527745 DUOX1Q9NRD9 1551 aa9.18□□□□□ -0.94
FGFR1-232ENST00000527745 TRMT112Q9UI30 125 aaKnown RBP9.18□□□□□ -0.94
FGFR1-232ENST00000527745 ATP6V0A2Q9Y487 856 aa9.18□□□□□ -0.94
FGFR1-232ENST00000527745 TMEM88BA6NKF7 163 aa9.17□□□□□ -0.94
FGFR1-232ENST00000527745 ITGBL1O95965 494 aaPredicted RBP9.17□□□□□ -0.94
FGFR1-232ENST00000527745 SCNN1DP51172 638 aa9.17□□□□□ -0.94
FGFR1-232ENST00000527745 AOC3Q16853 763 aa9.17□□□□□ -0.94
FGFR1-232ENST00000527745 MAP1SQ66K74 1059 aaPredicted RBP9.17□□□□□ -0.94
FGFR1-232ENST00000527745 DDX46Q7L014 1031 aaKnown RBP9.17□□□□□ -0.94
FGFR1-232ENST00000527745 PLBD2Q8NHP8 589 aa9.17□□□□□ -0.94
FGFR1-232ENST00000527745 ZNF428Q96B54 188 aa9.17□□□□□ -0.94
FGFR1-232ENST00000527745 CFAP44Q96MT7 982 aa9.17□□□□□ -0.94
FGFR1-232ENST00000527745 DBF4Q9UBU7 674 aaPredicted RBP9.17□□□□□ -0.94
FGFR1-232ENST00000527745 GRAPQ13588 217 aa9.16□□□□□ -0.94
FGFR1-232ENST00000527745 DUSP27Q5VZP5 1158 aa9.16□□□□□ -0.94
FGFR1-232ENST00000527745 DPP8Q6V1X1 898 aaPredicted RBP9.16□□□□□ -0.94
FGFR1-232ENST00000527745 TNS4Q8IZW8 715 aa9.16□□□□□ -0.94
FGFR1-232ENST00000527745 CNTROBQ8N137 903 aa9.16□□□□□ -0.94
FGFR1-232ENST00000527745 SUPT20HQ8NEM7 779 aa9.16□□□□□ -0.94
FGFR1-232ENST00000527745 GRAPLQ8TC17 118 aaPredicted RBP9.16□□□□□ -0.94
FGFR1-232ENST00000527745 MBIPQ9NS73 344 aa9.16□□□□□ -0.94
FGFR1-232ENST00000527745 COL4A1P02462 1669 aa9.16□□□□□ -0.94
FGFR1-232ENST00000527745 ATP5J2-PTCD1G3V325 749 aa9.15□□□□□ -0.94
FGFR1-232ENST00000527745 APAF1O14727 1248 aa9.15□□□□□ -0.94
FGFR1-232ENST00000527745 BBOX1O75936 387 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms