RNA–Protein interactions for RNA: ENST00000525801.1

ROM1-202, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 3

Gene ROM1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-202ENST00000525801 LARGE2Q8N3Y3 721 aa19.23■□□□□ 0.67
ROM1-202ENST00000525801 RBM17Q96I25 401 aaKnown RBP19.23■□□□□ 0.67
ROM1-202ENST00000525801 EIF6P56537 245 aaKnown RBP19.22■□□□□ 0.67
ROM1-202ENST00000525801 CCDC146Q8IYE0 955 aa19.22■□□□□ 0.67
ROM1-202ENST00000525801 L3MBTL3Q96JM7 780 aaPredicted RBP19.22■□□□□ 0.67
ROM1-202ENST00000525801 PPEF1O14829 653 aaPredicted RBP19.21■□□□□ 0.67
ROM1-202ENST00000525801 GRM1Q13255 1194 aa19.21■□□□□ 0.67
ROM1-202ENST00000525801 PROSER3Q2NL68 480 aa19.21■□□□□ 0.67
ROM1-202ENST00000525801 PNNQ9H307 717 aaKnown RBP19.21■□□□□ 0.67
ROM1-202ENST00000525801 TMEM88BA6NKF7 163 aa19.2■□□□□ 0.66
ROM1-202ENST00000525801 VEGFBP49765 207 aa19.2■□□□□ 0.66
ROM1-202ENST00000525801 PAXIP1Q6ZW49 1069 aaPredicted RBP19.2■□□□□ 0.66
ROM1-202ENST00000525801 CNTROBQ8N137 903 aa19.2■□□□□ 0.66
ROM1-202ENST00000525801 FZD9O00144 591 aa19.19■□□□□ 0.66
ROM1-202ENST00000525801 LMOD1P29536 600 aaPredicted RBP19.19■□□□□ 0.66
ROM1-202ENST00000525801 FMR1Q06787 632 aaKnown RBP eCLIP19.19■□□□□ 0.66
ROM1-202ENST00000525801 PPP1R42Q7Z4L9 355 aa19.19■□□□□ 0.66
ROM1-202ENST00000525801 TMX4Q9H1E5 349 aaPredicted RBP19.19■□□□□ 0.66
ROM1-202ENST00000525801 ABT1Q9ULW3 272 aaKnown RBP19.19■□□□□ 0.66
ROM1-202ENST00000525801 DICER1Q9UPY3 1922 aaKnown RBP19.18■□□□□ 0.66
ROM1-202ENST00000525801 FOXN1O15353 648 aa19.18■□□□□ 0.66
ROM1-202ENST00000525801 NTSR2O95665 410 aa19.18■□□□□ 0.66
ROM1-202ENST00000525801 ITGBL1O95965 494 aaPredicted RBP19.18■□□□□ 0.66
ROM1-202ENST00000525801 CRY2Q49AN0 593 aa19.18■□□□□ 0.66
ROM1-202ENST00000525801 GIGYF2Q6Y7W6 1299 aaKnown RBP19.18■□□□□ 0.66
ROM1-202ENST00000525801 ZNF34Q8IZ26 560 aa19.18■□□□□ 0.66
ROM1-202ENST00000525801 GPC2Q8N158 579 aa19.18■□□□□ 0.66
ROM1-202ENST00000525801 NLRP3Q96P20 1036 aa19.18■□□□□ 0.66
ROM1-202ENST00000525801 UTP14AQ9BVJ6 771 aaKnown RBP19.18■□□□□ 0.66
ROM1-202ENST00000525801 PASKQ96RG2 1323 aa19.18■□□□□ 0.66
ROM1-202ENST00000525801 RGL2O15211 777 aa19.17■□□□□ 0.66
ROM1-202ENST00000525801 PPIP5K2O43314 1243 aa19.17■□□□□ 0.66
ROM1-202ENST00000525801 HCLS1P14317 486 aaPredicted RBP19.17■□□□□ 0.66
ROM1-202ENST00000525801 EPS15P42566 896 aa19.17■□□□□ 0.66
ROM1-202ENST00000525801 AOC3Q16853 763 aa19.17■□□□□ 0.66
ROM1-202ENST00000525801 PNMA8AQ86V59 439 aaPredicted RBP19.17■□□□□ 0.66
ROM1-202ENST00000525801 AIDAQ96BJ3 306 aa19.17■□□□□ 0.66
ROM1-202ENST00000525801 PSMD1Q99460 953 aa19.17■□□□□ 0.66
ROM1-202ENST00000525801 CNTNAP1P78357 1384 aa19.17■□□□□ 0.66
ROM1-202ENST00000525801 KRT24Q2M2I5 525 aa19.16■□□□□ 0.66
ROM1-202ENST00000525801 COPS6Q7L5N1 327 aa19.16■□□□□ 0.66
ROM1-202ENST00000525801 NIM1KQ8IY84 436 aa19.16■□□□□ 0.66
ROM1-202ENST00000525801 XAGE3Q8WTP9 111 aa19.16■□□□□ 0.66
ROM1-202ENST00000525801 HOXA10P31260 410 aaPredicted RBP19.15■□□□□ 0.66
ROM1-202ENST00000525801 DDX10Q13206 875 aaKnown RBP19.15■□□□□ 0.66
ROM1-202ENST00000525801 CC2D2BQ6DHV5 1058 aa19.15■□□□□ 0.66
ROM1-202ENST00000525801 TMPOP42166 694 aaKnown RBP19.14■□□□□ 0.65
ROM1-202ENST00000525801 PDIA6Q15084 440 aa19.14■□□□□ 0.65
ROM1-202ENST00000525801 DEFB115Q30KQ5 88 aa19.14■□□□□ 0.65
ROM1-202ENST00000525801 CRAMP1Q96RY5 1269 aa19.14■□□□□ 0.65
ROM1-202ENST00000525801 ARFGEF2Q9Y6D5 1785 aa19.14■□□□□ 0.65
ROM1-202ENST00000525801 PARP10Q53GL7 1025 aa19.13■□□□□ 0.65
ROM1-202ENST00000525801 TRMT112Q9UI30 125 aaKnown RBP19.13■□□□□ 0.65
ROM1-202ENST00000525801 ABCC4O15439 1325 aa19.12■□□□□ 0.65
ROM1-202ENST00000525801 TRAF5O00463 557 aa19.12■□□□□ 0.65
ROM1-202ENST00000525801 RTL5Q5HYW3 569 aaPredicted RBP19.12■□□□□ 0.65
ROM1-202ENST00000525801 DLG5Q8TDM6 1919 aa19.12■□□□□ 0.65
ROM1-202ENST00000525801 LAMB4A4D0S4 1761 aa19.11■□□□□ 0.65
ROM1-202ENST00000525801 COL4A5P29400 1685 aa19.11■□□□□ 0.65
ROM1-202ENST00000525801 SCNN1DP51172 638 aa19.11■□□□□ 0.65
ROM1-202ENST00000525801 LBX1P52954 281 aa19.11■□□□□ 0.65
ROM1-202ENST00000525801 DPP8Q6V1X1 898 aaPredicted RBP19.11■□□□□ 0.65
ROM1-202ENST00000525801 ERBB4Q15303 1308 aa19.1■□□□□ 0.65
ROM1-202ENST00000525801 RAD17O75943 681 aa19.1■□□□□ 0.65
ROM1-202ENST00000525801 LMOD3Q0VAK6 560 aa19.1■□□□□ 0.65
ROM1-202ENST00000525801 DDX21Q9NR30 783 aaKnown RBP eCLIP19.1■□□□□ 0.65
ROM1-202ENST00000525801 ATP6V0A2Q9Y487 856 aa19.1■□□□□ 0.65
ROM1-202ENST00000525801 KDM3BQ7LBC6 1761 aa19.1■□□□□ 0.65
ROM1-202ENST00000525801 CTCFP49711 727 aaPredicted RBP19.09■□□□□ 0.65
ROM1-202ENST00000525801 WDR43Q15061 677 aaKnown RBP eCLIP19.09■□□□□ 0.65
ROM1-202ENST00000525801 RALBP1Q15311 655 aa19.09■□□□□ 0.65
ROM1-202ENST00000525801 DDX46Q7L014 1031 aaKnown RBP19.09■□□□□ 0.65
ROM1-202ENST00000525801 LRP10Q7Z4F1 713 aa19.09■□□□□ 0.65
ROM1-202ENST00000525801 NLRP10Q86W26 655 aa19.09■□□□□ 0.65
ROM1-202ENST00000525801 ZNF408Q9H9D4 720 aa19.09■□□□□ 0.65
ROM1-202ENST00000525801 CHPF2Q9P2E5 772 aa19.09■□□□□ 0.65
ROM1-202ENST00000525801 NUP98P52948 1817 aa19.09■□□□□ 0.65
ROM1-202ENST00000525801 WDR33Q9C0J8 1336 aaKnown RBP19.08■□□□□ 0.65
ROM1-202ENST00000525801 ATP5J2-PTCD1G3V325 749 aa19.08■□□□□ 0.64
ROM1-202ENST00000525801 GMPSP49915 693 aaPredicted RBP19.08■□□□□ 0.64
ROM1-202ENST00000525801 CXCL9Q07325 125 aa19.08■□□□□ 0.64
ROM1-202ENST00000525801 MPNDQ8N594 471 aa19.08■□□□□ 0.64
ROM1-202ENST00000525801 BCL2L13Q9BXK5 485 aa19.08■□□□□ 0.64
ROM1-202ENST00000525801 SCN4AP35499 1836 aa19.08■□□□□ 0.64
ROM1-202ENST00000525801 IBTKQ9P2D0 1353 aaPredicted RBP19.07■□□□□ 0.64
ROM1-202ENST00000525801 TCIRG1Q13488 830 aa19.07■□□□□ 0.64
ROM1-202ENST00000525801 HSP90AB3PQ58FF7 597 aa19.07■□□□□ 0.64
ROM1-202ENST00000525801 SLC10A5Q5PT55 438 aa19.07■□□□□ 0.64
ROM1-202ENST00000525801 CYP4F22Q6NT55 531 aa19.07■□□□□ 0.64
ROM1-202ENST00000525801 ZNRF3Q9ULT6 936 aa19.07■□□□□ 0.64
ROM1-202ENST00000525801 SNED1Q8TER0 1413 aa19.07■□□□□ 0.64
ROM1-202ENST00000525801 RIMBP2O15034 1052 aa19.06■□□□□ 0.64
ROM1-202ENST00000525801 GRIPAP1Q4V328 841 aa19.06■□□□□ 0.64
ROM1-202ENST00000525801 HDGFL1Q5TGJ6 251 aa19.06■□□□□ 0.64
ROM1-202ENST00000525801 SUPT20HQ8NEM7 779 aa19.06■□□□□ 0.64
ROM1-202ENST00000525801 BBOX1O75936 387 aa19.05■□□□□ 0.64
ROM1-202ENST00000525801 USP50Q70EL3 339 aaPredicted RBP19.05■□□□□ 0.64
ROM1-202ENST00000525801 FAM89AQ96GI7 184 aa19.05■□□□□ 0.64
ROM1-202ENST00000525801 WBP1LQ9NX94 342 aa19.05■□□□□ 0.64
ROM1-202ENST00000525801 TSKSQ9UJT2 592 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms