RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
CNKSR1-209ENST00000524529 IBTKQ9P2D0 1353 aaPredicted RBP12.68□□□□□ -0.38
CNKSR1-209ENST00000524529 ADAMTSL1Q8N6G6 1762 aa12.67□□□□□ -0.38
CNKSR1-209ENST00000524529 GTF2E1P29083 439 aaPredicted RBP12.67□□□□□ -0.38
CNKSR1-209ENST00000524529 KIF6Q6ZMV9 814 aa12.67□□□□□ -0.38
CNKSR1-209ENST00000524529 ANP32CO43423 234 aa12.66□□□□□ -0.38
CNKSR1-209ENST00000524529 ALDH1B1P30837 517 aa12.66□□□□□ -0.38
CNKSR1-209ENST00000524529 HOXA10P31260 410 aaPredicted RBP12.66□□□□□ -0.38
CNKSR1-209ENST00000524529 NEUROD2Q15784 382 aa12.66□□□□□ -0.38
CNKSR1-209ENST00000524529 SYNE4Q8N205 404 aa12.66□□□□□ -0.38
CNKSR1-209ENST00000524529 NECTIN2Q92692 538 aa12.66□□□□□ -0.38
CNKSR1-209ENST00000524529 L3MBTL3Q96JM7 780 aaPredicted RBP12.66□□□□□ -0.38
CNKSR1-209ENST00000524529 NYXQ9GZU5 481 aa12.66□□□□□ -0.38
CNKSR1-209ENST00000524529 LTBP1Q14766 1721 aa12.65□□□□□ -0.38
CNKSR1-209ENST00000524529 CHL1O00533 1208 aa12.65□□□□□ -0.38
CNKSR1-209ENST00000524529 IARSP41252 1262 aaKnown RBP12.65□□□□□ -0.38
CNKSR1-209ENST00000524529 RTKN2Q8IZC4 609 aa12.65□□□□□ -0.38
CNKSR1-209ENST00000524529 BABAM1Q9NWV8 329 aa12.65□□□□□ -0.38
CNKSR1-209ENST00000524529 ADAMTS8Q9UP79 889 aa12.65□□□□□ -0.38
CNKSR1-209ENST00000524529 FZD9O00144 591 aa12.64□□□□□ -0.39
CNKSR1-209ENST00000524529 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
CNKSR1-209ENST00000524529 COPS6Q7L5N1 327 aa12.64□□□□□ -0.39
CNKSR1-209ENST00000524529 TAF1DQ9H5J8 278 aaPredicted RBP12.64□□□□□ -0.39
CNKSR1-209ENST00000524529 DDX60Q8IY21 1712 aaKnown RBP12.64□□□□□ -0.39
CNKSR1-209ENST00000524529 LMOD3Q0VAK6 560 aa12.63□□□□□ -0.39
CNKSR1-209ENST00000524529 XAGE3Q8WTP9 111 aa12.63□□□□□ -0.39
CNKSR1-209ENST00000524529 RUNDC1Q96C34 613 aa12.63□□□□□ -0.39
CNKSR1-209ENST00000524529 CRAMP1Q96RY5 1269 aa12.63□□□□□ -0.39
CNKSR1-209ENST00000524529 PSMD1Q99460 953 aa12.63□□□□□ -0.39
CNKSR1-209ENST00000524529 TCERG1O14776 1098 aaKnown RBP12.62□□□□□ -0.39
CNKSR1-209ENST00000524529 AIMP1Q12904 312 aaKnown RBP12.62□□□□□ -0.39
CNKSR1-209ENST00000524529 PARP10Q53GL7 1025 aa12.62□□□□□ -0.39
CNKSR1-209ENST00000524529 SLC10A5Q5PT55 438 aa12.62□□□□□ -0.39
CNKSR1-209ENST00000524529 RPGRQ92834 1020 aaKnown RBP12.62□□□□□ -0.39
CNKSR1-209ENST00000524529 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
CNKSR1-209ENST00000524529 PASKQ96RG2 1323 aa12.62□□□□□ -0.39
CNKSR1-209ENST00000524529 COL4A1P02462 1669 aa12.61□□□□□ -0.39
CNKSR1-209ENST00000524529 PPEF1O14829 653 aaPredicted RBP12.61□□□□□ -0.39
CNKSR1-209ENST00000524529 PPP1R42Q7Z4L9 355 aa12.61□□□□□ -0.39
CNKSR1-209ENST00000524529 NLRP10Q86W26 655 aa12.61□□□□□ -0.39
CNKSR1-209ENST00000524529 TNS4Q8IZW8 715 aa12.61□□□□□ -0.39
CNKSR1-209ENST00000524529 ZNF428Q96B54 188 aa12.61□□□□□ -0.39
CNKSR1-209ENST00000524529 UTP14AQ9BVJ6 771 aaKnown RBP12.61□□□□□ -0.39
CNKSR1-209ENST00000524529 DDX21Q9NR30 783 aaKnown RBP eCLIP12.61□□□□□ -0.39
CNKSR1-209ENST00000524529 CHPF2Q9P2E5 772 aa12.61□□□□□ -0.39
CNKSR1-209ENST00000524529 ABCC4O15439 1325 aa12.61□□□□□ -0.39
CNKSR1-209ENST00000524529 IQCA1LA6NCM1 817 aa12.6□□□□□ -0.39
CNKSR1-209ENST00000524529 ITGBL1O95965 494 aaPredicted RBP12.6□□□□□ -0.39
CNKSR1-209ENST00000524529 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
CNKSR1-209ENST00000524529 TCIRG1Q13488 830 aa12.6□□□□□ -0.39
CNKSR1-209ENST00000524529 CCDC184Q52MB2 194 aa12.6□□□□□ -0.39
CNKSR1-209ENST00000524529 DIEXFQ68CQ4 756 aaKnown RBP12.6□□□□□ -0.39
CNKSR1-209ENST00000524529 CC2D2BQ6DHV5 1058 aa12.6□□□□□ -0.39
CNKSR1-209ENST00000524529 LDHDQ86WU2 507 aa12.6□□□□□ -0.39
CNKSR1-209ENST00000524529 RBM17Q96I25 401 aaKnown RBP12.6□□□□□ -0.39
CNKSR1-209ENST00000524529 LAS1LQ9Y4W2 734 aaKnown RBP12.6□□□□□ -0.39
CNKSR1-209ENST00000524529 CAPN15O75808 1086 aa12.59□□□□□ -0.39
CNKSR1-209ENST00000524529 EPHX2P34913 555 aa12.59□□□□□ -0.39
CNKSR1-209ENST00000524529 WDR43Q15061 677 aaKnown RBP eCLIP12.59□□□□□ -0.39
CNKSR1-209ENST00000524529 EAPPQ56P03 285 aaPredicted RBP12.59□□□□□ -0.39
CNKSR1-209ENST00000524529 NLRP3Q96P20 1036 aa12.59□□□□□ -0.39
CNKSR1-209ENST00000524529 CREBZFQ9NS37 354 aa12.59□□□□□ -0.39
CNKSR1-209ENST00000524529 HACL1Q9UJ83 578 aa12.59□□□□□ -0.39
CNKSR1-209ENST00000524529 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
CNKSR1-209ENST00000524529 ZNF853P0CG23 659 aa12.58□□□□□ -0.4
CNKSR1-209ENST00000524529 GPC2Q8N158 579 aa12.58□□□□□ -0.4
CNKSR1-209ENST00000524529 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
CNKSR1-209ENST00000524529 DUOX1Q9NRD9 1551 aa12.58□□□□□ -0.4
CNKSR1-209ENST00000524529 MBIPQ9NS73 344 aa12.58□□□□□ -0.4
CNKSR1-209ENST00000524529 MKRN1Q9UHC7 482 aaKnown RBP12.58□□□□□ -0.4
CNKSR1-209ENST00000524529 HSPA1AP0DMV8 641 aaKnown RBP12.57□□□□□ -0.4
CNKSR1-209ENST00000524529 HSPA1BP0DMV9 641 aaKnown RBP12.57□□□□□ -0.4
CNKSR1-209ENST00000524529 SCNN1DP51172 638 aa12.57□□□□□ -0.4
CNKSR1-209ENST00000524529 AOC3Q16853 763 aa12.57□□□□□ -0.4
CNKSR1-209ENST00000524529 HSP90AB3PQ58FF7 597 aa12.57□□□□□ -0.4
CNKSR1-209ENST00000524529 HDGFL1Q5TGJ6 251 aa12.57□□□□□ -0.4
CNKSR1-209ENST00000524529 DUSP27Q5VZP5 1158 aa12.57□□□□□ -0.4
CNKSR1-209ENST00000524529 LARGE2Q8N3Y3 721 aa12.57□□□□□ -0.4
CNKSR1-209ENST00000524529 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
CNKSR1-209ENST00000524529 ISCA1Q9BUE6 129 aa12.57□□□□□ -0.4
CNKSR1-209ENST00000524529 ATP6V0A2Q9Y487 856 aa12.57□□□□□ -0.4
CNKSR1-209ENST00000524529 TRPM7Q96QT4 1865 aa12.57□□□□□ -0.4
CNKSR1-209ENST00000524529 APAF1O14727 1248 aa12.56□□□□□ -0.4
CNKSR1-209ENST00000524529 HOXB7P09629 217 aa12.56□□□□□ -0.4
CNKSR1-209ENST00000524529 EPS15P42566 896 aa12.56□□□□□ -0.4
CNKSR1-209ENST00000524529 MAP1SQ66K74 1059 aaPredicted RBP12.56□□□□□ -0.4
CNKSR1-209ENST00000524529 PLBD2Q8NHP8 589 aa12.56□□□□□ -0.4
CNKSR1-209ENST00000524529 RTFDC1Q9BY42 306 aaPredicted RBP12.56□□□□□ -0.4
CNKSR1-209ENST00000524529 TRMT112Q9UI30 125 aaKnown RBP12.56□□□□□ -0.4
CNKSR1-209ENST00000524529 GJA3Q9Y6H8 435 aa12.56□□□□□ -0.4
CNKSR1-209ENST00000524529 SH3TC1Q8TE82 1336 aa12.56□□□□□ -0.4
CNKSR1-209ENST00000524529 ATP5J2-PTCD1G3V325 749 aa12.55□□□□□ -0.4
CNKSR1-209ENST00000524529 PPIP5K2O43314 1243 aa12.55□□□□□ -0.4
CNKSR1-209ENST00000524529 EIF6P56537 245 aaKnown RBP12.55□□□□□ -0.4
CNKSR1-209ENST00000524529 FMR1Q06787 632 aaKnown RBP eCLIP12.55□□□□□ -0.4
CNKSR1-209ENST00000524529 GRIPAP1Q4V328 841 aa12.55□□□□□ -0.4
CNKSR1-209ENST00000524529 ANKRD13DQ6ZTN6 518 aa12.55□□□□□ -0.4
CNKSR1-209ENST00000524529 DBF4Q9UBU7 674 aaPredicted RBP12.55□□□□□ -0.4
CNKSR1-209ENST00000524529 CLEC11AQ9Y240 323 aa12.55□□□□□ -0.4
CNKSR1-209ENST00000524529 CNTNAP1P78357 1384 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms