RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 GNRH1P01148 92 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 SPATA31C1P0DKV0 1188 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 DGKGP49619 791 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 SMTNP53814 917 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 FKBP4Q02790 459 aaKnown RBP eCLIP4.66□□□□□ -1.66
LINC01339-204ENST00000524094 KRTAP1-1Q07627 177 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 TBCELQ5QJ74 424 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 COX20Q5RI15 118 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 SH3PXD2AQ5TCZ1 1133 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 Q6ZVU0 165 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 FBXO33Q7Z6M2 555 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 CCDC116Q8IYX3 515 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 ZDHHC1Q8WTX9 485 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 SCG3Q8WXD2 468 aaKnown RBP4.66□□□□□ -1.66
LINC01339-204ENST00000524094 MKNK1Q9BUB5 465 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 SERTAD1Q9UHV2 236 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 A6NJY4 79 aa4.65□□□□□ -1.67
LINC01339-204ENST00000524094 RBM25P49756 843 aaKnown RBP4.65□□□□□ -1.67
LINC01339-204ENST00000524094 PSME1Q06323 249 aa4.65□□□□□ -1.67
LINC01339-204ENST00000524094 STAG2Q8N3U4 1231 aa4.65□□□□□ -1.67
LINC01339-204ENST00000524094 PCMTD2Q9NV79 361 aa4.65□□□□□ -1.67
LINC01339-204ENST00000524094 ANKRD33BA6NCL7 494 aa4.64□□□□□ -1.67
LINC01339-204ENST00000524094 CDK2AP1O14519 115 aa4.64□□□□□ -1.67
LINC01339-204ENST00000524094 FOXO3O43524 673 aa4.64□□□□□ -1.67
LINC01339-204ENST00000524094 MYCP01106 439 aaPredicted RBP4.64□□□□□ -1.67
LINC01339-204ENST00000524094 ZNF16P17020 682 aaPredicted RBP4.64□□□□□ -1.67
LINC01339-204ENST00000524094 LDLRAD1Q5T700 205 aa4.64□□□□□ -1.67
LINC01339-204ENST00000524094 RIPOR1Q6ZS17 1223 aa4.64□□□□□ -1.67
LINC01339-204ENST00000524094 BTBD6Q96KE9 485 aa4.64□□□□□ -1.67
LINC01339-204ENST00000524094 QTRT2Q9H974 415 aaKnown RBP4.64□□□□□ -1.67
LINC01339-204ENST00000524094 RAB6BQ9NRW1 208 aa4.64□□□□□ -1.67
LINC01339-204ENST00000524094 RNF112Q9ULX5 631 aa4.64□□□□□ -1.67
LINC01339-204ENST00000524094 EML1O00423 815 aa4.63□□□□□ -1.67
LINC01339-204ENST00000524094 FZD6O60353 706 aa4.63□□□□□ -1.67
LINC01339-204ENST00000524094 CENPCQ03188 943 aa4.63□□□□□ -1.67
LINC01339-204ENST00000524094 DHX9Q08211 1270 aaKnown RBP4.63□□□□□ -1.67
LINC01339-204ENST00000524094 SLC9A9Q8IVB4 645 aa4.63□□□□□ -1.67
LINC01339-204ENST00000524094 GOLGA6L1Q8N7Z2 621 aa4.63□□□□□ -1.67
LINC01339-204ENST00000524094 HELQQ8TDG4 1101 aa4.63□□□□□ -1.67
LINC01339-204ENST00000524094 AGBL1Q96MI9 1066 aa4.63□□□□□ -1.67
LINC01339-204ENST00000524094 ESYT1Q9BSJ8 1104 aa4.63□□□□□ -1.67
LINC01339-204ENST00000524094 H3BRB1 525 aa4.62□□□□□ -1.67
LINC01339-204ENST00000524094 PTCD1O75127 700 aaKnown RBP4.62□□□□□ -1.67
LINC01339-204ENST00000524094 ABL1P00519 1130 aa4.62□□□□□ -1.67
LINC01339-204ENST00000524094 ADH1AP07327 375 aa4.62□□□□□ -1.67
LINC01339-204ENST00000524094 PTGIRP43119 386 aa4.62□□□□□ -1.67
LINC01339-204ENST00000524094 CLN3Q13286 438 aa4.62□□□□□ -1.67
LINC01339-204ENST00000524094 DSC3Q14574 896 aa4.62□□□□□ -1.67
LINC01339-204ENST00000524094 CNKSR1Q969H4 720 aa4.62□□□□□ -1.67
LINC01339-204ENST00000524094 TRIM52Q96A61 297 aa4.62□□□□□ -1.67
LINC01339-204ENST00000524094 TUT1Q9H6E5 874 aaKnown RBP4.62□□□□□ -1.67
LINC01339-204ENST00000524094 ARHGEF10LQ9HCE6 1279 aa4.62□□□□□ -1.67
LINC01339-204ENST00000524094 CCDC87Q9NVE4 849 aa4.62□□□□□ -1.67
LINC01339-204ENST00000524094 BCS1LQ9Y276 419 aa4.62□□□□□ -1.67
LINC01339-204ENST00000524094 H7C1W4 665 aa4.61□□□□□ -1.67
LINC01339-204ENST00000524094 BACH1O14867 736 aa4.61□□□□□ -1.67
LINC01339-204ENST00000524094 C8AP07357 584 aa4.61□□□□□ -1.67
LINC01339-204ENST00000524094 HIRAP54198 1017 aaPredicted RBP4.61□□□□□ -1.67
LINC01339-204ENST00000524094 RELBQ01201 579 aa4.61□□□□□ -1.67
LINC01339-204ENST00000524094 SF3B2Q13435 895 aaKnown RBP4.61□□□□□ -1.67
LINC01339-204ENST00000524094 TEAD4Q15561 434 aa4.61□□□□□ -1.67
LINC01339-204ENST00000524094 CYP2U1Q7Z449 544 aa4.61□□□□□ -1.67
LINC01339-204ENST00000524094 MYO19Q96H55 970 aa4.61□□□□□ -1.67
LINC01339-204ENST00000524094 ASB16Q96NS5 453 aa4.61□□□□□ -1.67
LINC01339-204ENST00000524094 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
LINC01339-204ENST00000524094 GRIP2Q9C0E4 1043 aa4.61□□□□□ -1.67
LINC01339-204ENST00000524094 RNF19AQ9NV58 838 aa4.61□□□□□ -1.67
LINC01339-204ENST00000524094 PPP1R12BO60237 982 aaPredicted RBP4.6□□□□□ -1.67
LINC01339-204ENST00000524094 ERCC3P19447 782 aa4.6□□□□□ -1.67
LINC01339-204ENST00000524094 MPSTP25325 297 aa4.6□□□□□ -1.67
LINC01339-204ENST00000524094 NOS2P35228 1153 aa4.6□□□□□ -1.67
LINC01339-204ENST00000524094 LYSMD3Q7Z3D4 306 aa4.6□□□□□ -1.67
LINC01339-204ENST00000524094 PPARGC1BQ86YN6 1023 aaKnown RBP4.6□□□□□ -1.67
LINC01339-204ENST00000524094 ETFBKMTQ8IXQ9 262 aa4.6□□□□□ -1.67
LINC01339-204ENST00000524094 RBCK1Q9BYM8 510 aa4.6□□□□□ -1.67
LINC01339-204ENST00000524094 E9PSI1 815 aa4.59□□□□□ -1.67
LINC01339-204ENST00000524094 APBA3O96018 575 aa4.59□□□□□ -1.67
LINC01339-204ENST00000524094 EIF1AXP47813 144 aaKnown RBP4.59□□□□□ -1.67
LINC01339-204ENST00000524094 C16orf46Q6P387 395 aa4.59□□□□□ -1.67
LINC01339-204ENST00000524094 TMC7Q7Z402 723 aa4.59□□□□□ -1.67
LINC01339-204ENST00000524094 CHMP7Q8WUX9 453 aaPredicted RBP4.59□□□□□ -1.67
LINC01339-204ENST00000524094 PLVAPQ9BX97 442 aa4.59□□□□□ -1.67
LINC01339-204ENST00000524094 ZNF395Q9H8N7 513 aaPredicted RBP4.59□□□□□ -1.67
LINC01339-204ENST00000524094 DMGDHQ9UI17 866 aaKnown RBP4.59□□□□□ -1.67
LINC01339-204ENST00000524094 DCTN4Q9UJW0 460 aa4.59□□□□□ -1.67
LINC01339-204ENST00000524094 HCN4Q9Y3Q4 1203 aa4.59□□□□□ -1.67
LINC01339-204ENST00000524094 PARP3Q9Y6F1 533 aa4.59□□□□□ -1.67
LINC01339-204ENST00000524094 OAS3Q9Y6K5 1087 aaKnown RBP4.59□□□□□ -1.67
LINC01339-204ENST00000524094 GRNP28799 593 aaKnown RBP4.58□□□□□ -1.68
LINC01339-204ENST00000524094 TXLNAP40222 546 aa4.58□□□□□ -1.68
LINC01339-204ENST00000524094 PSMA6P60900 246 aaKnown RBP4.58□□□□□ -1.68
LINC01339-204ENST00000524094 ATCAYQ86WG3 371 aa4.58□□□□□ -1.68
LINC01339-204ENST00000524094 GLYCTKQ8IVS8 523 aa4.58□□□□□ -1.68
LINC01339-204ENST00000524094 RGL4Q8IZJ4 473 aa4.58□□□□□ -1.68
LINC01339-204ENST00000524094 L3MBTL2Q969R5 705 aa4.58□□□□□ -1.68
LINC01339-204ENST00000524094 TRIM11Q96F44 468 aa4.58□□□□□ -1.68
LINC01339-204ENST00000524094 FAM129BQ96TA1 746 aa4.58□□□□□ -1.68
LINC01339-204ENST00000524094 PGPEP1Q9NXJ5 209 aa4.58□□□□□ -1.68
LINC01339-204ENST00000524094 STIM2Q9P246 746 aa4.58□□□□□ -1.68
LINC01339-204ENST00000524094 BIN2Q9UBW5 565 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms