RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 PARP3Q9Y6F1 533 aa10.04□□□□□ -0.8
FAM49B-227ENST00000523514 IER5LQ5T953 404 aa10.03□□□□□ -0.8
FAM49B-227ENST00000523514 DZIP3Q86Y13 1208 aaKnown RBP10.03□□□□□ -0.8
FAM49B-227ENST00000523514 WDR63Q8IWG1 891 aa10.03□□□□□ -0.8
FAM49B-227ENST00000523514 NRXN2Q9P2S2 1712 aa10.02□□□□□ -0.8
FAM49B-227ENST00000523514 C10orf71Q711Q0 1435 aa10.02□□□□□ -0.81
FAM49B-227ENST00000523514 NBPF26B4DH59 902 aa10.02□□□□□ -0.81
FAM49B-227ENST00000523514 NBPF10Q6P3W6 841 aaKnown RBP10.02□□□□□ -0.81
FAM49B-227ENST00000523514 CLEC4GQ6UXB4 293 aa10.02□□□□□ -0.81
FAM49B-227ENST00000523514 NBPF15Q8N660 670 aa10.02□□□□□ -0.81
FAM49B-227ENST00000523514 TBC1D2BQ9UPU7 963 aa10.02□□□□□ -0.81
FAM49B-227ENST00000523514 CARMIL3Q8ND23 1372 aa10.01□□□□□ -0.81
FAM49B-227ENST00000523514 AFDNP55196 1824 aaKnown RBP10.01□□□□□ -0.81
FAM49B-227ENST00000523514 CAMTA2O94983 1202 aa10.01□□□□□ -0.81
FAM49B-227ENST00000523514 EIF2S2P20042 333 aaKnown RBP10.01□□□□□ -0.81
FAM49B-227ENST00000523514 TM4SF1P30408 202 aa10.01□□□□□ -0.81
FAM49B-227ENST00000523514 MFSD10Q14728 455 aa10.01□□□□□ -0.81
FAM49B-227ENST00000523514 HDGFL1Q5TGJ6 251 aa10.01□□□□□ -0.81
FAM49B-227ENST00000523514 KIF6Q6ZMV9 814 aa10.01□□□□□ -0.81
FAM49B-227ENST00000523514 BCL2L12Q9HB09 334 aa10.01□□□□□ -0.81
FAM49B-227ENST00000523514 ERVV-1B6SEH8 477 aa10□□□□□ -0.81
FAM49B-227ENST00000523514 POLRMTO00411 1230 aaKnown RBP10□□□□□ -0.81
FAM49B-227ENST00000523514 MYL6BP14649 208 aa10□□□□□ -0.81
FAM49B-227ENST00000523514 PIP4K2AP48426 406 aaPredicted RBP10□□□□□ -0.81
FAM49B-227ENST00000523514 DDR1Q08345 913 aa10□□□□□ -0.81
FAM49B-227ENST00000523514 NFIXQ14938 502 aa10□□□□□ -0.81
FAM49B-227ENST00000523514 DUSP27Q5VZP5 1158 aa10□□□□□ -0.81
FAM49B-227ENST00000523514 DDX21Q9NR30 783 aaKnown RBP eCLIP10□□□□□ -0.81
FAM49B-227ENST00000523514 DBF4Q9UBU7 674 aaPredicted RBP10□□□□□ -0.81
FAM49B-227ENST00000523514 NUP98P52948 1817 aa10□□□□□ -0.81
FAM49B-227ENST00000523514 TGFB2P61812 414 aa9.99□□□□□ -0.81
FAM49B-227ENST00000523514 KRT24Q2M2I5 525 aa9.99□□□□□ -0.81
FAM49B-227ENST00000523514 SETDB2Q96T68 719 aa9.99□□□□□ -0.81
FAM49B-227ENST00000523514 LARP6Q9BRS8 491 aaKnown RBP9.99□□□□□ -0.81
FAM49B-227ENST00000523514 MYH16Q9H6N6 1097 aa9.99□□□□□ -0.81
FAM49B-227ENST00000523514 SALL2Q9Y467 1007 aaPredicted RBP9.99□□□□□ -0.81
FAM49B-227ENST00000523514 MAP3K15Q6ZN16 1313 aa9.99□□□□□ -0.81
FAM49B-227ENST00000523514 KIAA1551Q9HCM1 1747 aa9.99□□□□□ -0.81
FAM49B-227ENST00000523514 ATP10DQ9P241 1426 aa9.99□□□□□ -0.81
FAM49B-227ENST00000523514 ANKRD36CQ5JPF3 1778 aa9.98□□□□□ -0.81
FAM49B-227ENST00000523514 SERPINB2P05120 415 aa9.98□□□□□ -0.81
FAM49B-227ENST00000523514 PDE4AP27815 886 aa9.98□□□□□ -0.81
FAM49B-227ENST00000523514 PDIA6Q15084 440 aa9.98□□□□□ -0.81
FAM49B-227ENST00000523514 TMEM132AQ24JP5 1023 aa9.98□□□□□ -0.81
FAM49B-227ENST00000523514 TBC1D9BQ66K14 1250 aa9.98□□□□□ -0.81
FAM49B-227ENST00000523514 MICALL2Q8IY33 904 aa9.98□□□□□ -0.81
FAM49B-227ENST00000523514 NLGN2Q8NFZ4 835 aa9.98□□□□□ -0.81
FAM49B-227ENST00000523514 TSR2Q969E8 191 aaKnown RBP9.98□□□□□ -0.81
FAM49B-227ENST00000523514 OCEL1Q9H607 264 aa9.98□□□□□ -0.81
FAM49B-227ENST00000523514 HYPKQ9NX55 129 aa9.98□□□□□ -0.81
FAM49B-227ENST00000523514 FANCIQ9NVI1 1328 aa9.98□□□□□ -0.81
FAM49B-227ENST00000523514 PXDNLA1KZ92 1463 aa9.98□□□□□ -0.81
FAM49B-227ENST00000523514 CACNA1FO60840 1977 aa9.97□□□□□ -0.81
FAM49B-227ENST00000523514 DLEC1Q9Y238 1755 aa9.97□□□□□ -0.81
FAM49B-227ENST00000523514 SENP3-EIF4A1A0A087X0R7 540 aa9.97□□□□□ -0.81
FAM49B-227ENST00000523514 NPHP1O15259 732 aa9.97□□□□□ -0.81
FAM49B-227ENST00000523514 HSP90AB3PQ58FF7 597 aa9.97□□□□□ -0.81
FAM49B-227ENST00000523514 CCDC30Q5VVM6 783 aa9.97□□□□□ -0.81
FAM49B-227ENST00000523514 BICDL1Q6ZP65 573 aa9.97□□□□□ -0.81
FAM49B-227ENST00000523514 LRP10Q7Z4F1 713 aa9.97□□□□□ -0.81
FAM49B-227ENST00000523514 OTUD5Q96G74 571 aa9.97□□□□□ -0.81
FAM49B-227ENST00000523514 CHPF2Q9P2E5 772 aa9.97□□□□□ -0.81
FAM49B-227ENST00000523514 PDZRN3Q9UPQ7 1066 aa9.97□□□□□ -0.81
FAM49B-227ENST00000523514 ZNF521Q96K83 1311 aa9.97□□□□□ -0.81
FAM49B-227ENST00000523514 BRCA1P38398 1863 aaKnown RBP9.97□□□□□ -0.81
FAM49B-227ENST00000523514 IBTKQ9P2D0 1353 aaPredicted RBP9.97□□□□□ -0.81
FAM49B-227ENST00000523514 N4BP2Q86UW6 1770 aaPredicted RBP9.96□□□□□ -0.81
FAM49B-227ENST00000523514 SEC24BO95487 1268 aa9.96□□□□□ -0.82
FAM49B-227ENST00000523514 ST5P78524 1137 aa9.96□□□□□ -0.82
FAM49B-227ENST00000523514 E2F4Q16254 413 aa9.96□□□□□ -0.82
FAM49B-227ENST00000523514 PROSER3Q2NL68 480 aa9.96□□□□□ -0.82
FAM49B-227ENST00000523514 TWISTNBQ3B726 338 aaPredicted RBP9.96□□□□□ -0.82
FAM49B-227ENST00000523514 GIGYF2Q6Y7W6 1299 aaKnown RBP9.96□□□□□ -0.82
FAM49B-227ENST00000523514 TTLL7Q6ZT98 887 aa9.96□□□□□ -0.82
FAM49B-227ENST00000523514 NBPF5PQ86XG9 351 aaPredicted RBP9.96□□□□□ -0.82
FAM49B-227ENST00000523514 CNBD1Q8NA66 436 aa9.96□□□□□ -0.82
FAM49B-227ENST00000523514 C8orf58Q8NAV2 365 aa9.96□□□□□ -0.82
FAM49B-227ENST00000523514 NECTIN2Q92692 538 aa9.96□□□□□ -0.82
FAM49B-227ENST00000523514 STK31Q9BXU1 1019 aa9.96□□□□□ -0.82
FAM49B-227ENST00000523514 ZBTB3Q9H5J0 574 aa9.96□□□□□ -0.82
FAM49B-227ENST00000523514 NIP7Q9Y221 180 aaKnown RBP eCLIP9.96□□□□□ -0.82
FAM49B-227ENST00000523514 E9PSI1 815 aa9.95□□□□□ -0.82
FAM49B-227ENST00000523514 ELL2O00472 640 aaPredicted RBP9.95□□□□□ -0.82
FAM49B-227ENST00000523514 GRIN3BO60391 1043 aa9.95□□□□□ -0.82
FAM49B-227ENST00000523514 ANXA1P04083 346 aa9.95□□□□□ -0.82
FAM49B-227ENST00000523514 GPR162Q16538 588 aa9.95□□□□□ -0.82
FAM49B-227ENST00000523514 PARP10Q53GL7 1025 aa9.95□□□□□ -0.82
FAM49B-227ENST00000523514 PRR5LQ6MZQ0 368 aa9.95□□□□□ -0.82
FAM49B-227ENST00000523514 TPTE2Q6XPS3 522 aa9.95□□□□□ -0.82
FAM49B-227ENST00000523514 COPS6Q7L5N1 327 aa9.95□□□□□ -0.82
FAM49B-227ENST00000523514 XAGE3Q8WTP9 111 aa9.95□□□□□ -0.82
FAM49B-227ENST00000523514 TMEM121BQ9BXQ6 578 aaPredicted RBP9.95□□□□□ -0.82
FAM49B-227ENST00000523514 NYXQ9GZU5 481 aa9.95□□□□□ -0.82
FAM49B-227ENST00000523514 RNF123Q5XPI4 1314 aa9.95□□□□□ -0.82
FAM49B-227ENST00000523514 ARFGEF2Q9Y6D5 1785 aa9.95□□□□□ -0.82
FAM49B-227ENST00000523514 ANKRD31Q8N7Z5 1873 aa9.95□□□□□ -0.82
FAM49B-227ENST00000523514 CHD4Q14839 1912 aa9.94□□□□□ -0.82
FAM49B-227ENST00000523514 ARFGEF1Q9Y6D6 1849 aa9.94□□□□□ -0.82
FAM49B-227ENST00000523514 RIC1Q4ADV7 1423 aa9.94□□□□□ -0.82
FAM49B-227ENST00000523514 DDX58O95786 925 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms