RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ATP7BP35670 1465 aa9.49□□□□□ -0.89
VPS13B-211ENST00000522802 ZBTB7AO95365 584 aa9.49□□□□□ -0.89
VPS13B-211ENST00000522802 TRIM67Q6ZTA4 783 aa9.49□□□□□ -0.89
VPS13B-211ENST00000522802 PPARGC1BQ86YN6 1023 aaKnown RBP9.49□□□□□ -0.89
VPS13B-211ENST00000522802 PNMA1Q8ND90 353 aa9.49□□□□□ -0.89
VPS13B-211ENST00000522802 GPKOWQ92917 476 aaPredicted RBP eCLIP9.49□□□□□ -0.89
VPS13B-211ENST00000522802 SIRT1Q96EB6 747 aa9.49□□□□□ -0.89
VPS13B-211ENST00000522802 HIRIP3Q9BW71 556 aaPredicted RBP9.49□□□□□ -0.89
VPS13B-211ENST00000522802 GDPD2Q9HCC8 539 aa9.49□□□□□ -0.89
VPS13B-211ENST00000522802 AKAP12Q02952 1782 aa9.49□□□□□ -0.89
VPS13B-211ENST00000522802 OVOS2A0A0G2JMS6 1433 aa9.48□□□□□ -0.89
VPS13B-211ENST00000522802 OVOS2A0A0J9YW53 1432 aa9.48□□□□□ -0.89
VPS13B-211ENST00000522802 OVOS2Q6IE36 1432 aa9.48□□□□□ -0.89
VPS13B-211ENST00000522802 PDE3BQ13370 1112 aa9.48□□□□□ -0.89
VPS13B-211ENST00000522802 SPRYD7Q5W111 196 aa9.48□□□□□ -0.89
VPS13B-211ENST00000522802 LARP1Q6PKG0 1096 aaKnown RBP9.48□□□□□ -0.89
VPS13B-211ENST00000522802 PTF1AQ7RTS3 328 aa9.48□□□□□ -0.89
VPS13B-211ENST00000522802 CLUAP1Q96AJ1 413 aa9.48□□□□□ -0.89
VPS13B-211ENST00000522802 FHDC1Q9C0D6 1143 aaPredicted RBP9.48□□□□□ -0.89
VPS13B-211ENST00000522802 ARHGEF28Q8N1W1 1705 aaKnown RBP9.48□□□□□ -0.89
VPS13B-211ENST00000522802 COL5A2P05997 1499 aaPredicted RBP9.47□□□□□ -0.89
VPS13B-211ENST00000522802 RAD21O60216 631 aa9.47□□□□□ -0.89
VPS13B-211ENST00000522802 ZC3H6P61129 1189 aaKnown RBP9.47□□□□□ -0.89
VPS13B-211ENST00000522802 SH3BP2P78314 561 aa9.47□□□□□ -0.89
VPS13B-211ENST00000522802 CFAP70Q5T0N1 1121 aa9.47□□□□□ -0.89
VPS13B-211ENST00000522802 PDXDC2PQ6P474 469 aa9.47□□□□□ -0.89
VPS13B-211ENST00000522802 ZNF511Q8NB15 262 aa9.47□□□□□ -0.89
VPS13B-211ENST00000522802 DHX57Q6P158 1386 aaKnown RBP9.47□□□□□ -0.89
VPS13B-211ENST00000522802 PAPPAQ13219 1627 aa9.46□□□□□ -0.89
VPS13B-211ENST00000522802 A6NJR5 290 aa9.46□□□□□ -0.9
VPS13B-211ENST00000522802 WNT7BP56706 349 aa9.46□□□□□ -0.9
VPS13B-211ENST00000522802 SKOR1P84550 965 aa9.46□□□□□ -0.9
VPS13B-211ENST00000522802 IRF5Q13568 498 aa9.46□□□□□ -0.9
VPS13B-211ENST00000522802 NUTM2GQ5VZR2 741 aa9.46□□□□□ -0.9
VPS13B-211ENST00000522802 C14orf93Q9H972 538 aaKnown RBP9.46□□□□□ -0.9
VPS13B-211ENST00000522802 EIF3AQ14152 1382 aaKnown RBP9.46□□□□□ -0.9
VPS13B-211ENST00000522802 LINC01559Q495D7 138 aa9.45□□□□□ -0.9
VPS13B-211ENST00000522802 ERICH6Q7L0X2 663 aa9.45□□□□□ -0.9
VPS13B-211ENST00000522802 ZNF598Q86UK7 904 aaKnown RBP9.45□□□□□ -0.9
VPS13B-211ENST00000522802 TCP11L2Q8N4U5 519 aa9.45□□□□□ -0.9
VPS13B-211ENST00000522802 SYT17Q9BSW7 474 aa9.45□□□□□ -0.9
VPS13B-211ENST00000522802 ZMYND15Q9H091 742 aa9.45□□□□□ -0.9
VPS13B-211ENST00000522802 GPSM3Q9Y4H4 160 aa9.45□□□□□ -0.9
VPS13B-211ENST00000522802 ABL2P42684 1182 aa9.44□□□□□ -0.9
VPS13B-211ENST00000522802 SH3BP5LQ7L8J4 393 aa9.44□□□□□ -0.9
VPS13B-211ENST00000522802 SH3RF1Q7Z6J0 888 aa9.44□□□□□ -0.9
VPS13B-211ENST00000522802 NGDNQ8NEJ9 315 aaKnown RBP9.44□□□□□ -0.9
VPS13B-211ENST00000522802 OCSTAMPQ9BR26 566 aa9.44□□□□□ -0.9
VPS13B-211ENST00000522802 POGKQ9P215 609 aa9.44□□□□□ -0.9
VPS13B-211ENST00000522802 CPDO75976 1380 aa9.44□□□□□ -0.9
VPS13B-211ENST00000522802 GIGYF1O75420 1035 aaPredicted RBP9.43□□□□□ -0.9
VPS13B-211ENST00000522802 EVA1CP58658 441 aa9.43□□□□□ -0.9
VPS13B-211ENST00000522802 FOXJ1Q92949 421 aa9.43□□□□□ -0.9
VPS13B-211ENST00000522802 NHSQ6T4R5 1651 aa9.42□□□□□ -0.9
VPS13B-211ENST00000522802 CRB1P82279 1406 aa9.42□□□□□ -0.9
VPS13B-211ENST00000522802 USP19O94966 1318 aa9.42□□□□□ -0.9
VPS13B-211ENST00000522802 PLSCR1O15162 318 aa9.42□□□□□ -0.9
VPS13B-211ENST00000522802 PTK2Q05397 1052 aa9.42□□□□□ -0.9
VPS13B-211ENST00000522802 C4orf48Q5BLP8 95 aa9.42□□□□□ -0.9
VPS13B-211ENST00000522802 MAP3K5Q99683 1374 aa9.41□□□□□ -0.9
VPS13B-211ENST00000522802 ZBBXA8MT70 800 aa9.41□□□□□ -0.9
VPS13B-211ENST00000522802 WASLO00401 505 aaPredicted RBP9.41□□□□□ -0.9
VPS13B-211ENST00000522802 BPHLQ86WA6 291 aaPredicted RBP9.41□□□□□ -0.9
VPS13B-211ENST00000522802 TIMELESSQ9UNS1 1208 aa9.41□□□□□ -0.9
VPS13B-211ENST00000522802 TRAK1Q9UPV9 953 aa9.41□□□□□ -0.9
VPS13B-211ENST00000522802 COL18A1P39060 1754 aa9.41□□□□□ -0.9
VPS13B-211ENST00000522802 TUBGCP6Q96RT7 1819 aa9.4□□□□□ -0.9
VPS13B-211ENST00000522802 POLR3AO14802 1390 aaPredicted RBP9.4□□□□□ -0.9
VPS13B-211ENST00000522802 COL24A1Q17RW2 1714 aa9.4□□□□□ -0.9
VPS13B-211ENST00000522802 PKDCCQ504Y2 493 aa9.4□□□□□ -0.9
VPS13B-211ENST00000522802 RC3H1Q5TC82 1133 aaKnown RBP9.4□□□□□ -0.9
VPS13B-211ENST00000522802 ZNF697Q5TEC3 545 aa9.4□□□□□ -0.9
VPS13B-211ENST00000522802 ARHGAP9Q9BRR9 750 aa9.4□□□□□ -0.9
VPS13B-211ENST00000522802 THRAP3Q9Y2W1 955 aaKnown RBP9.4□□□□□ -0.9
VPS13B-211ENST00000522802 RGPD5Q99666 1765 aa9.4□□□□□ -0.91
VPS13B-211ENST00000522802 POTECB2RU33 542 aa9.39□□□□□ -0.91
VPS13B-211ENST00000522802 WNT7AO00755 349 aa9.39□□□□□ -0.91
VPS13B-211ENST00000522802 FBXO45P0C2W1 286 aa9.39□□□□□ -0.91
VPS13B-211ENST00000522802 NR1H3Q13133 447 aa9.39□□□□□ -0.91
VPS13B-211ENST00000522802 WASHC4Q2M389 1173 aa9.39□□□□□ -0.91
VPS13B-211ENST00000522802 MTFR1LQ9H019 292 aa9.39□□□□□ -0.91
VPS13B-211ENST00000522802 STK32BQ9NY57 414 aa9.39□□□□□ -0.91
VPS13B-211ENST00000522802 SLIT3O75094 1523 aa9.39□□□□□ -0.91
VPS13B-211ENST00000522802 BCL9O00512 1426 aa9.39□□□□□ -0.91
VPS13B-211ENST00000522802 PIK3C2AO00443 1686 aa9.39□□□□□ -0.91
VPS13B-211ENST00000522802 AATKQ6ZMQ8 1374 aa9.38□□□□□ -0.91
VPS13B-211ENST00000522802 BTAF1O14981 1849 aa9.38□□□□□ -0.91
VPS13B-211ENST00000522802 VARSP26640 1264 aaKnown RBP9.38□□□□□ -0.91
VPS13B-211ENST00000522802 SLC15A2Q16348 729 aa9.38□□□□□ -0.91
VPS13B-211ENST00000522802 TXNRD1Q16881 649 aa9.38□□□□□ -0.91
VPS13B-211ENST00000522802 MARCH10Q8NA82 808 aaPredicted RBP9.38□□□□□ -0.91
VPS13B-211ENST00000522802 C1QTNF2Q9BXJ5 285 aa9.38□□□□□ -0.91
VPS13B-211ENST00000522802 PKD2L1Q9P0L9 805 aa9.38□□□□□ -0.91
VPS13B-211ENST00000522802 QSER1Q2KHR3 1735 aa9.38□□□□□ -0.91
VPS13B-211ENST00000522802 C11orf95C9JLR9 678 aaPredicted RBP9.37□□□□□ -0.91
VPS13B-211ENST00000522802 TRAK2O60296 914 aa9.37□□□□□ -0.91
VPS13B-211ENST00000522802 DGAT1O75907 488 aa9.37□□□□□ -0.91
VPS13B-211ENST00000522802 PRR20EP86478 221 aa9.37□□□□□ -0.91
VPS13B-211ENST00000522802 PRR20CP86479 221 aa9.37□□□□□ -0.91
VPS13B-211ENST00000522802 PRR20DP86480 221 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms