RNA–Protein interactions for RNA: ENST00000522743.1

AP003351.1-201, humanhuman

TSL 3 BASIC

Gene AP003351.1, Length 668 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003351.1-201ENST00000522743 NUTM1Q86Y26 1132 aa17.06■□□□□ 0.32
AP003351.1-201ENST00000522743 ZBTB3Q9H5J0 574 aa17.06■□□□□ 0.32
AP003351.1-201ENST00000522743 KDM3BQ7LBC6 1761 aa17.05■□□□□ 0.32
AP003351.1-201ENST00000522743 GPTP24298 496 aa17.05■□□□□ 0.32
AP003351.1-201ENST00000522743 GPC2Q8N158 579 aa17.05■□□□□ 0.32
AP003351.1-201ENST00000522743 EPHX2P34913 555 aa17.04■□□□□ 0.32
AP003351.1-201ENST00000522743 RIPK4P57078 832 aa17.04■□□□□ 0.32
AP003351.1-201ENST00000522743 HSP90AB3PQ58FF7 597 aa17.04■□□□□ 0.32
AP003351.1-201ENST00000522743 GIGYF2Q6Y7W6 1299 aaKnown RBP17.04■□□□□ 0.32
AP003351.1-201ENST00000522743 AIDAQ96BJ3 306 aa17.04■□□□□ 0.32
AP003351.1-201ENST00000522743 NLRP3Q96P20 1036 aa17.04■□□□□ 0.32
AP003351.1-201ENST00000522743 THUMPD2Q9BTF0 503 aaKnown RBP17.04■□□□□ 0.32
AP003351.1-201ENST00000522743 ADAMTS8Q9UP79 889 aa17.04■□□□□ 0.32
AP003351.1-201ENST00000522743 ABCC12Q96J65 1359 aa17.03■□□□□ 0.32
AP003351.1-201ENST00000522743 RNF123Q5XPI4 1314 aa17.03■□□□□ 0.32
AP003351.1-201ENST00000522743 ZNF541Q9H0D2 1346 aa17.03■□□□□ 0.32
AP003351.1-201ENST00000522743 FZD9O00144 591 aa17.03■□□□□ 0.32
AP003351.1-201ENST00000522743 PPEF1O14829 653 aaPredicted RBP17.03■□□□□ 0.32
AP003351.1-201ENST00000522743 EIF2S2P20042 333 aaKnown RBP17.03■□□□□ 0.32
AP003351.1-201ENST00000522743 COL13A1Q5TAT6 717 aaPredicted RBP17.03■□□□□ 0.32
AP003351.1-201ENST00000522743 TTLL7Q6ZT98 887 aa17.03■□□□□ 0.32
AP003351.1-201ENST00000522743 LARGE2Q8N3Y3 721 aa17.03■□□□□ 0.32
AP003351.1-201ENST00000522743 RUNDC1Q96C34 613 aa17.03■□□□□ 0.32
AP003351.1-201ENST00000522743 CRAMP1Q96RY5 1269 aa17.03■□□□□ 0.32
AP003351.1-201ENST00000522743 DLG5Q8TDM6 1919 aa17.03■□□□□ 0.32
AP003351.1-201ENST00000522743 TMEM88BA6NKF7 163 aa17.02■□□□□ 0.32
AP003351.1-201ENST00000522743 HOXA10P31260 410 aaPredicted RBP17.02■□□□□ 0.32
AP003351.1-201ENST00000522743 NIM1KQ8IY84 436 aa17.02■□□□□ 0.32
AP003351.1-201ENST00000522743 UTP14AQ9BVJ6 771 aaKnown RBP17.02■□□□□ 0.32
AP003351.1-201ENST00000522743 MKRN1Q9UHC7 482 aaKnown RBP17.02■□□□□ 0.32
AP003351.1-201ENST00000522743 SUSD4Q5VX71 490 aa17.01■□□□□ 0.31
AP003351.1-201ENST00000522743 ZNF34Q8IZ26 560 aa17.01■□□□□ 0.31
AP003351.1-201ENST00000522743 SUPT20HQ8NEM7 779 aa17.01■□□□□ 0.31
AP003351.1-201ENST00000522743 UBN2Q6ZU65 1347 aa17■□□□□ 0.31
AP003351.1-201ENST00000522743 POTEIP0CG38 1075 aa17■□□□□ 0.31
AP003351.1-201ENST00000522743 POTEJP0CG39 1038 aa17■□□□□ 0.31
AP003351.1-201ENST00000522743 OLFM4Q6UX06 510 aa17■□□□□ 0.31
AP003351.1-201ENST00000522743 VPS33BQ9H267 617 aa17■□□□□ 0.31
AP003351.1-201ENST00000522743 GJA3Q9Y6H8 435 aa17■□□□□ 0.31
AP003351.1-201ENST00000522743 NUP98P52948 1817 aa17■□□□□ 0.31
AP003351.1-201ENST00000522743 CNTNAP1P78357 1384 aa17■□□□□ 0.31
AP003351.1-201ENST00000522743 PASKQ96RG2 1323 aa16.99■□□□□ 0.31
AP003351.1-201ENST00000522743 NTSR2O95665 410 aa16.99■□□□□ 0.31
AP003351.1-201ENST00000522743 TMPOP42166 694 aaKnown RBP16.99■□□□□ 0.31
AP003351.1-201ENST00000522743 MRS2Q9HD23 443 aa16.99■□□□□ 0.31
AP003351.1-201ENST00000522743 PPIP5K2O43314 1243 aa16.98■□□□□ 0.31
AP003351.1-201ENST00000522743 CCDC184Q52MB2 194 aa16.98■□□□□ 0.31
AP003351.1-201ENST00000522743 CNTROBQ8N137 903 aa16.97■□□□□ 0.31
AP003351.1-201ENST00000522743 TCERG1O14776 1098 aaKnown RBP16.96■□□□□ 0.31
AP003351.1-201ENST00000522743 CAPN15O75808 1086 aa16.96■□□□□ 0.31
AP003351.1-201ENST00000522743 DDX46Q7L014 1031 aaKnown RBP16.96■□□□□ 0.31
AP003351.1-201ENST00000522743 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.31
AP003351.1-201ENST00000522743 ABT1Q9ULW3 272 aaKnown RBP16.96■□□□□ 0.31
AP003351.1-201ENST00000522743 ATP6V0A2Q9Y487 856 aa16.96■□□□□ 0.31
AP003351.1-201ENST00000522743 BBOX1O75936 387 aa16.95■□□□□ 0.3
AP003351.1-201ENST00000522743 AIMP1Q12904 312 aaKnown RBP16.95■□□□□ 0.3
AP003351.1-201ENST00000522743 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
AP003351.1-201ENST00000522743 MAP1SQ66K74 1059 aaPredicted RBP16.95■□□□□ 0.3
AP003351.1-201ENST00000522743 USP50Q70EL3 339 aaPredicted RBP16.95■□□□□ 0.3
AP003351.1-201ENST00000522743 TMC4Q7Z404 712 aa16.95■□□□□ 0.3
AP003351.1-201ENST00000522743 LAS1LQ9Y4W2 734 aaKnown RBP16.95■□□□□ 0.3
AP003351.1-201ENST00000522743 SH3TC1Q8TE82 1336 aa16.95■□□□□ 0.3
AP003351.1-201ENST00000522743 ITGBL1O95965 494 aaPredicted RBP16.94■□□□□ 0.3
AP003351.1-201ENST00000522743 HOXB7P09629 217 aa16.94■□□□□ 0.3
AP003351.1-201ENST00000522743 CTCFP49711 727 aaPredicted RBP16.94■□□□□ 0.3
AP003351.1-201ENST00000522743 SLC10A5Q5PT55 438 aa16.94■□□□□ 0.3
AP003351.1-201ENST00000522743 DPP8Q6V1X1 898 aaPredicted RBP16.94■□□□□ 0.3
AP003351.1-201ENST00000522743 COPS6Q7L5N1 327 aa16.94■□□□□ 0.3
AP003351.1-201ENST00000522743 XAGE3Q8WTP9 111 aa16.94■□□□□ 0.3
AP003351.1-201ENST00000522743 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
AP003351.1-201ENST00000522743 TRMT112Q9UI30 125 aaKnown RBP16.94■□□□□ 0.3
AP003351.1-201ENST00000522743 DEFB115Q30KQ5 88 aa16.93■□□□□ 0.3
AP003351.1-201ENST00000522743 NECTIN2Q92692 538 aa16.93■□□□□ 0.3
AP003351.1-201ENST00000522743 SNED1Q8TER0 1413 aa16.93■□□□□ 0.3
AP003351.1-201ENST00000522743 ABCC4O15439 1325 aa16.93■□□□□ 0.3
AP003351.1-201ENST00000522743 HSP90B1P14625 803 aaKnown RBP16.92■□□□□ 0.3
AP003351.1-201ENST00000522743 ECE1P42892 770 aa16.92■□□□□ 0.3
AP003351.1-201ENST00000522743 MAP2K1Q02750 393 aaPredicted RBP16.92■□□□□ 0.3
AP003351.1-201ENST00000522743 TCIRG1Q13488 830 aa16.92■□□□□ 0.3
AP003351.1-201ENST00000522743 PDIA6Q15084 440 aa16.92■□□□□ 0.3
AP003351.1-201ENST00000522743 HDGFL1Q5TGJ6 251 aa16.92■□□□□ 0.3
AP003351.1-201ENST00000522743 PAXIP1Q6ZW49 1069 aaPredicted RBP16.92■□□□□ 0.3
AP003351.1-201ENST00000522743 MPNDQ8N594 471 aa16.92■□□□□ 0.3
AP003351.1-201ENST00000522743 BEGAINQ9BUH8 593 aa16.92■□□□□ 0.3
AP003351.1-201ENST00000522743 ZNRF3Q9ULT6 936 aa16.92■□□□□ 0.3
AP003351.1-201ENST00000522743 RASSF10A6NK89 507 aa16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 ANXA1P04083 346 aa16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 VEGFBP49765 207 aa16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 CALD1Q05682 793 aaKnown RBP16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 TNIP1Q15025 636 aa16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 AOC3Q16853 763 aa16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 PROSER3Q2NL68 480 aa16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 NLRP10Q86W26 655 aa16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 SP8Q8IXZ3 490 aa16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 BCL2L13Q9BXK5 485 aa16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 CHMP4AQ9BY43 222 aa16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 PRDM10Q9NQV6 1147 aa16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 ADARB2Q9NS39 739 aaKnown RBP16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 DBF4Q9UBU7 674 aaPredicted RBP16.91■□□□□ 0.3
AP003351.1-201ENST00000522743 CDHR2Q9BYE9 1310 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms