RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-229	ENST00000521683	PARP10	Q53GL7	1025 aa		11.7	□□□□□ -0.54
CTNNA1-229	ENST00000521683	OLFM4	Q6UX06	510 aa		11.7	□□□□□ -0.54
CTNNA1-229	ENST00000521683	LRP10	Q7Z4F1	713 aa		11.7	□□□□□ -0.54
CTNNA1-229	ENST00000521683	SYNE4	Q8N205	404 aa		11.7	□□□□□ -0.54
CTNNA1-229	ENST00000521683	ADAMTSL1	Q8N6G6	1762 aa		11.69	□□□□□ -0.54
CTNNA1-229	ENST00000521683	RNF123	Q5XPI4	1314 aa		11.69	□□□□□ -0.54
CTNNA1-229	ENST00000521683	PASK	Q96RG2	1323 aa		11.69	□□□□□ -0.54
CTNNA1-229	ENST00000521683	GPT	P24298	496 aa		11.69	□□□□□ -0.54
CTNNA1-229	ENST00000521683	RIPK4	P57078	832 aa		11.69	□□□□□ -0.54
CTNNA1-229	ENST00000521683	PDIA6	Q15084	440 aa		11.69	□□□□□ -0.54
CTNNA1-229	ENST00000521683	SUSD4	Q5VX71	490 aa		11.69	□□□□□ -0.54
CTNNA1-229	ENST00000521683	PPP1R42	Q7Z4L9	355 aa		11.69	□□□□□ -0.54
CTNNA1-229	ENST00000521683	RPGR	Q92834	1020 aa	Known RBP	11.69	□□□□□ -0.54
CTNNA1-229	ENST00000521683	CRAMP1	Q96RY5	1269 aa		11.69	□□□□□ -0.54
CTNNA1-229	ENST00000521683	HACL1	Q9UJ83	578 aa		11.69	□□□□□ -0.54
CTNNA1-229	ENST00000521683	TMPO	P42166	694 aa	Known RBP	11.68	□□□□□ -0.54
CTNNA1-229	ENST00000521683	GPC2	Q8N158	579 aa		11.68	□□□□□ -0.54
CTNNA1-229	ENST00000521683	JDP2	Q8WYK2	163 aa		11.68	□□□□□ -0.54
CTNNA1-229	ENST00000521683	RBM17	Q96I25	401 aa	Known RBP	11.68	□□□□□ -0.54
CTNNA1-229	ENST00000521683	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.67	□□□□□ -0.54
CTNNA1-229	ENST00000521683	HSPA1A	P0DMV8	641 aa	Known RBP	11.67	□□□□□ -0.54
CTNNA1-229	ENST00000521683	HSPA1B	P0DMV9	641 aa	Known RBP	11.67	□□□□□ -0.54
CTNNA1-229	ENST00000521683	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.67	□□□□□ -0.54
CTNNA1-229	ENST00000521683	PNMA8A	Q86V59	439 aa	Predicted RBP	11.67	□□□□□ -0.54
CTNNA1-229	ENST00000521683	ANKRD36C	Q5JPF3	1778 aa		11.67	□□□□□ -0.54
CTNNA1-229	ENST00000521683	CNTNAP1	P78357	1384 aa		11.67	□□□□□ -0.54
CTNNA1-229	ENST00000521683	COL4A5	P29400	1685 aa		11.66	□□□□□ -0.54
CTNNA1-229	ENST00000521683	PPEF1	O14829	653 aa	Predicted RBP	11.66	□□□□□ -0.54
CTNNA1-229	ENST00000521683	EIF2S2	P20042	333 aa	Known RBP	11.66	□□□□□ -0.54
CTNNA1-229	ENST00000521683	EPHX2	P34913	555 aa		11.66	□□□□□ -0.54
CTNNA1-229	ENST00000521683	HSP90AB3P	Q58FF7	597 aa		11.66	□□□□□ -0.54
CTNNA1-229	ENST00000521683	SLC10A5	Q5PT55	438 aa		11.66	□□□□□ -0.54
CTNNA1-229	ENST00000521683	NLRP3	Q96P20	1036 aa		11.66	□□□□□ -0.54
CTNNA1-229	ENST00000521683	UTP14A	Q9BVJ6	771 aa	Known RBP	11.66	□□□□□ -0.54
CTNNA1-229	ENST00000521683	ITGBL1	O95965	494 aa	Predicted RBP	11.65	□□□□□ -0.54
CTNNA1-229	ENST00000521683	EIF6	P56537	245 aa	Known RBP	11.65	□□□□□ -0.54
CTNNA1-229	ENST00000521683	PROSER3	Q2NL68	480 aa		11.65	□□□□□ -0.54
CTNNA1-229	ENST00000521683	EAPP	Q56P03	285 aa	Predicted RBP	11.65	□□□□□ -0.54
CTNNA1-229	ENST00000521683	C3orf67	Q6ZVT6	689 aa		11.65	□□□□□ -0.54
CTNNA1-229	ENST00000521683	VPS33B	Q9H267	617 aa		11.65	□□□□□ -0.54
CTNNA1-229	ENST00000521683	TMEM88B	A6NKF7	163 aa		11.64	□□□□□ -0.55
CTNNA1-229	ENST00000521683	CHL1	O00533	1208 aa		11.64	□□□□□ -0.55
CTNNA1-229	ENST00000521683	HOXB7	P09629	217 aa		11.64	□□□□□ -0.55
CTNNA1-229	ENST00000521683	LARGE2	Q8N3Y3	721 aa		11.64	□□□□□ -0.55
CTNNA1-229	ENST00000521683	RUNDC1	Q96C34	613 aa		11.64	□□□□□ -0.55
CTNNA1-229	ENST00000521683	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
CTNNA1-229	ENST00000521683	MKRN1	Q9UHC7	482 aa	Known RBP	11.64	□□□□□ -0.55
CTNNA1-229	ENST00000521683	ABCC4	O15439	1325 aa		11.63	□□□□□ -0.55
CTNNA1-229	ENST00000521683	ANXA1	P04083	346 aa		11.63	□□□□□ -0.55
CTNNA1-229	ENST00000521683	LMOD1	P29536	600 aa	Predicted RBP	11.63	□□□□□ -0.55
CTNNA1-229	ENST00000521683	COPS6	Q7L5N1	327 aa		11.63	□□□□□ -0.55
CTNNA1-229	ENST00000521683	NLRP10	Q86W26	655 aa		11.63	□□□□□ -0.55
CTNNA1-229	ENST00000521683	TNS4	Q8IZW8	715 aa		11.63	□□□□□ -0.55
CTNNA1-229	ENST00000521683	XAGE3	Q8WTP9	111 aa		11.63	□□□□□ -0.55
CTNNA1-229	ENST00000521683	TMX4	Q9H1E5	349 aa	Predicted RBP	11.63	□□□□□ -0.55
CTNNA1-229	ENST00000521683	CLEC11A	Q9Y240	323 aa		11.63	□□□□□ -0.55
CTNNA1-229	ENST00000521683	ATP6V0A2	Q9Y487	856 aa		11.63	□□□□□ -0.55
CTNNA1-229	ENST00000521683	LTBP1	Q14766	1721 aa		11.63	□□□□□ -0.55
CTNNA1-229	ENST00000521683	LAMB2	P55268	1798 aa		11.62	□□□□□ -0.55
CTNNA1-229	ENST00000521683	BBOX1	O75936	387 aa		11.62	□□□□□ -0.55
CTNNA1-229	ENST00000521683	SCNN1D	P51172	638 aa		11.62	□□□□□ -0.55
CTNNA1-229	ENST00000521683	TCIRG1	Q13488	830 aa		11.62	□□□□□ -0.55
CTNNA1-229	ENST00000521683	WDR43	Q15061	677 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
CTNNA1-229	ENST00000521683	NIM1K	Q8IY84	436 aa		11.62	□□□□□ -0.55
CTNNA1-229	ENST00000521683	CNTROB	Q8N137	903 aa		11.62	□□□□□ -0.55
CTNNA1-229	ENST00000521683	SUPT20H	Q8NEM7	779 aa		11.62	□□□□□ -0.55
CTNNA1-229	ENST00000521683	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.62	□□□□□ -0.55
CTNNA1-229	ENST00000521683	TRIM35	Q9UPQ4	493 aa		11.62	□□□□□ -0.55
CTNNA1-229	ENST00000521683	GJA3	Q9Y6H8	435 aa		11.62	□□□□□ -0.55
CTNNA1-229	ENST00000521683	SH3TC1	Q8TE82	1336 aa		11.61	□□□□□ -0.55
CTNNA1-229	ENST00000521683	PPIP5K2	O43314	1243 aa		11.61	□□□□□ -0.55
CTNNA1-229	ENST00000521683	AIMP1	Q12904	312 aa	Known RBP	11.61	□□□□□ -0.55
CTNNA1-229	ENST00000521683	DDX10	Q13206	875 aa	Known RBP	11.61	□□□□□ -0.55
CTNNA1-229	ENST00000521683	MAP1S	Q66K74	1059 aa	Predicted RBP	11.61	□□□□□ -0.55
CTNNA1-229	ENST00000521683	SLC51A	Q86UW1	340 aa		11.61	□□□□□ -0.55
CTNNA1-229	ENST00000521683	CCDC146	Q8IYE0	955 aa		11.61	□□□□□ -0.55
CTNNA1-229	ENST00000521683	TRMT112	Q9UI30	125 aa	Known RBP	11.61	□□□□□ -0.55
CTNNA1-229	ENST00000521683	RASSF10	A6NK89	507 aa		11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	TCERG1	O14776	1098 aa	Known RBP	11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	GRAP	Q13588	217 aa		11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	NEUROD2	Q15784	382 aa		11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	AOC3	Q16853	763 aa		11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	KRT24	Q2M2I5	525 aa		11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	HDGFL1	Q5TGJ6	251 aa		11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	USP50	Q70EL3	339 aa	Predicted RBP	11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	TMC4	Q7Z404	712 aa		11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	SP8	Q8IXZ3	490 aa		11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	GRAPL	Q8TC17	118 aa	Predicted RBP	11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	NECTIN2	Q92692	538 aa		11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	CHPF2	Q9P2E5	772 aa		11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	CDHR2	Q9BYE9	1310 aa		11.6	□□□□□ -0.55
CTNNA1-229	ENST00000521683	HCLS1	P14317	486 aa	Predicted RBP	11.59	□□□□□ -0.55
CTNNA1-229	ENST00000521683	EPS15	P42566	896 aa		11.59	□□□□□ -0.55
CTNNA1-229	ENST00000521683	VEGFB	P49765	207 aa		11.59	□□□□□ -0.55
CTNNA1-229	ENST00000521683	KIAA2012	Q0VF49	1180 aa		11.59	□□□□□ -0.55
CTNNA1-229	ENST00000521683	DPP8	Q6V1X1	898 aa	Predicted RBP	11.59	□□□□□ -0.55
CTNNA1-229	ENST00000521683	DDX46	Q7L014	1031 aa	Known RBP	11.59	□□□□□ -0.55
CTNNA1-229	ENST00000521683	PLBD2	Q8NHP8	589 aa		11.59	□□□□□ -0.55
CTNNA1-229	ENST00000521683	CFAP44	Q96MT7	982 aa		11.59	□□□□□ -0.55
CTNNA1-229	ENST00000521683	DBF4	Q9UBU7	674 aa	Predicted RBP	11.59	□□□□□ -0.55

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