RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 CCDC146Q8IYE0 955 aa26.66■■□□□ 1.86
PABPC1-217ENST00000521067 PSMD1Q99460 953 aa26.66■■□□□ 1.86
PABPC1-217ENST00000521067 BABAM1Q9NWV8 329 aa26.66■■□□□ 1.86
PABPC1-217ENST00000521067 IBTKQ9P2D0 1353 aaPredicted RBP26.66■■□□□ 1.86
PABPC1-217ENST00000521067 IQCA1LA6NCM1 817 aa26.65■■□□□ 1.86
PABPC1-217ENST00000521067 RPGRQ92834 1020 aaKnown RBP26.65■■□□□ 1.86
PABPC1-217ENST00000521067 NEUROD2Q15784 382 aa26.64■■□□□ 1.86
PABPC1-217ENST00000521067 KRT24Q2M2I5 525 aa26.64■■□□□ 1.86
PABPC1-217ENST00000521067 NECTIN2Q92692 538 aa26.64■■□□□ 1.86
PABPC1-217ENST00000521067 RIC1Q4ADV7 1423 aa26.64■■□□□ 1.85
PABPC1-217ENST00000521067 LDHDQ86WU2 507 aa26.63■■□□□ 1.85
PABPC1-217ENST00000521067 CRAMP1Q96RY5 1269 aa26.63■■□□□ 1.85
PABPC1-217ENST00000521067 TCERG1O14776 1098 aaKnown RBP26.62■■□□□ 1.85
PABPC1-217ENST00000521067 PARP10Q53GL7 1025 aa26.62■■□□□ 1.85
PABPC1-217ENST00000521067 CC2D2BQ6DHV5 1058 aa26.62■■□□□ 1.85
PABPC1-217ENST00000521067 PPP1R42Q7Z4L9 355 aa26.62■■□□□ 1.85
PABPC1-217ENST00000521067 CREBZFQ9NS37 354 aa26.62■■□□□ 1.85
PABPC1-217ENST00000521067 TRIM35Q9UPQ4 493 aa26.62■■□□□ 1.85
PABPC1-217ENST00000521067 PASKQ96RG2 1323 aa26.62■■□□□ 1.85
PABPC1-217ENST00000521067 MYBBP1AQ9BQG0 1328 aaKnown RBP26.62■■□□□ 1.85
PABPC1-217ENST00000521067 COL4A5P29400 1685 aa26.61■■□□□ 1.85
PABPC1-217ENST00000521067 CHL1O00533 1208 aa26.61■■□□□ 1.85
PABPC1-217ENST00000521067 LMOD3Q0VAK6 560 aa26.61■■□□□ 1.85
PABPC1-217ENST00000521067 SLC10A5Q5PT55 438 aa26.61■■□□□ 1.85
PABPC1-217ENST00000521067 COPS6Q7L5N1 327 aa26.61■■□□□ 1.85
PABPC1-217ENST00000521067 RBM17Q96I25 401 aaKnown RBP26.61■■□□□ 1.85
PABPC1-217ENST00000521067 HACL1Q9UJ83 578 aa26.61■■□□□ 1.85
PABPC1-217ENST00000521067 ITGBL1O95965 494 aaPredicted RBP26.6■■□□□ 1.85
PABPC1-217ENST00000521067 EAPPQ56P03 285 aaPredicted RBP26.6■■□□□ 1.85
PABPC1-217ENST00000521067 UTP14AQ9BVJ6 771 aaKnown RBP26.6■■□□□ 1.85
PABPC1-217ENST00000521067 RNF123Q5XPI4 1314 aa26.6■■□□□ 1.85
PABPC1-217ENST00000521067 EPHX2P34913 555 aa26.59■■□□□ 1.85
PABPC1-217ENST00000521067 AIMP1Q12904 312 aaKnown RBP26.59■■□□□ 1.85
PABPC1-217ENST00000521067 XAGE3Q8WTP9 111 aa26.59■■□□□ 1.85
PABPC1-217ENST00000521067 MKRN1Q9UHC7 482 aaKnown RBP26.59■■□□□ 1.85
PABPC1-217ENST00000521067 PPEF1O14829 653 aaPredicted RBP26.58■■□□□ 1.85
PABPC1-217ENST00000521067 HSPA1AP0DMV8 641 aaKnown RBP26.58■■□□□ 1.85
PABPC1-217ENST00000521067 HSPA1BP0DMV9 641 aaKnown RBP26.58■■□□□ 1.85
PABPC1-217ENST00000521067 GPC2Q8N158 579 aa26.58■■□□□ 1.85
PABPC1-217ENST00000521067 JDP2Q8WYK2 163 aa26.58■■□□□ 1.85
PABPC1-217ENST00000521067 NLRP3Q96P20 1036 aa26.58■■□□□ 1.85
PABPC1-217ENST00000521067 ADAMTS8Q9UP79 889 aa26.58■■□□□ 1.85
PABPC1-217ENST00000521067 RUNDC1Q96C34 613 aa26.57■■□□□ 1.84
PABPC1-217ENST00000521067 SCN4AP35499 1836 aa26.57■■□□□ 1.84
PABPC1-217ENST00000521067 NLRP10Q86W26 655 aa26.56■■□□□ 1.84
PABPC1-217ENST00000521067 LAS1LQ9Y4W2 734 aaKnown RBP26.56■■□□□ 1.84
PABPC1-217ENST00000521067 DDX21Q9NR30 783 aaKnown RBP eCLIP26.55■■□□□ 1.84
PABPC1-217ENST00000521067 CLEC11AQ9Y240 323 aa26.55■■□□□ 1.84
PABPC1-217ENST00000521067 HCLS1P14317 486 aaPredicted RBP26.54■■□□□ 1.84
PABPC1-217ENST00000521067 TCIRG1Q13488 830 aa26.54■■□□□ 1.84
PABPC1-217ENST00000521067 GRIPAP1Q4V328 841 aa26.54■■□□□ 1.84
PABPC1-217ENST00000521067 LARGE2Q8N3Y3 721 aa26.54■■□□□ 1.84
PABPC1-217ENST00000521067 ZNF428Q96B54 188 aa26.54■■□□□ 1.84
PABPC1-217ENST00000521067 GJA3Q9Y6H8 435 aa26.54■■□□□ 1.84
PABPC1-217ENST00000521067 EIF6P56537 245 aaKnown RBP26.53■■□□□ 1.84
PABPC1-217ENST00000521067 MAP1SQ66K74 1059 aaPredicted RBP26.53■■□□□ 1.84
PABPC1-217ENST00000521067 ATP6V0A2Q9Y487 856 aa26.53■■□□□ 1.84
PABPC1-217ENST00000521067 ABCC4O15439 1325 aa26.53■■□□□ 1.84
PABPC1-217ENST00000521067 PNMA8AQ86V59 439 aaPredicted RBP26.52■■□□□ 1.84
PABPC1-217ENST00000521067 CHPF2Q9P2E5 772 aa26.52■■□□□ 1.84
PABPC1-217ENST00000521067 SCNN1DP51172 638 aa26.51■■□□□ 1.83
PABPC1-217ENST00000521067 WDR43Q15061 677 aaKnown RBP eCLIP26.51■■□□□ 1.83
PABPC1-217ENST00000521067 HSP90AB3PQ58FF7 597 aa26.51■■□□□ 1.83
PABPC1-217ENST00000521067 CNTROBQ8N137 903 aa26.51■■□□□ 1.83
PABPC1-217ENST00000521067 CNTNAP1P78357 1384 aa26.5■■□□□ 1.83
PABPC1-217ENST00000521067 TMEM88BA6NKF7 163 aa26.5■■□□□ 1.83
PABPC1-217ENST00000521067 EPS15P42566 896 aa26.5■■□□□ 1.83
PABPC1-217ENST00000521067 ADAMTSL1Q8N6G6 1762 aa26.5■■□□□ 1.83
PABPC1-217ENST00000521067 AOC3Q16853 763 aa26.49■■□□□ 1.83
PABPC1-217ENST00000521067 TRMT112Q9UI30 125 aaKnown RBP26.49■■□□□ 1.83
PABPC1-217ENST00000521067 PPIP5K2O43314 1243 aa26.48■■□□□ 1.83
PABPC1-217ENST00000521067 BBOX1O75936 387 aa26.47■■□□□ 1.83
PABPC1-217ENST00000521067 HDGFL1Q5TGJ6 251 aa26.47■■□□□ 1.83
PABPC1-217ENST00000521067 NIM1KQ8IY84 436 aa26.47■■□□□ 1.83
PABPC1-217ENST00000521067 RTFDC1Q9BY42 306 aaPredicted RBP26.47■■□□□ 1.83
PABPC1-217ENST00000521067 PRKRIP1Q9H875 184 aaPredicted RBP26.47■■□□□ 1.83
PABPC1-217ENST00000521067 LTBP1Q14766 1721 aa26.47■■□□□ 1.83
PABPC1-217ENST00000521067 SH3TC1Q8TE82 1336 aa26.46■■□□□ 1.83
PABPC1-217ENST00000521067 VEGFBP49765 207 aa26.46■■□□□ 1.83
PABPC1-217ENST00000521067 SP8Q8IXZ3 490 aa26.46■■□□□ 1.83
PABPC1-217ENST00000521067 TNS4Q8IZW8 715 aa26.46■■□□□ 1.83
PABPC1-217ENST00000521067 CFAP44Q96MT7 982 aa26.46■■□□□ 1.83
PABPC1-217ENST00000521067 FMR1Q06787 632 aaKnown RBP eCLIP26.45■■□□□ 1.82
PABPC1-217ENST00000521067 ANKRD13DQ6ZTN6 518 aa26.45■■□□□ 1.82
PABPC1-217ENST00000521067 PLBD2Q8NHP8 589 aa26.45■■□□□ 1.82
PABPC1-217ENST00000521067 HOXB7P09629 217 aa26.44■■□□□ 1.82
PABPC1-217ENST00000521067 CXCL9Q07325 125 aa26.44■■□□□ 1.82
PABPC1-217ENST00000521067 DUSP27Q5VZP5 1158 aa26.44■■□□□ 1.82
PABPC1-217ENST00000521067 ISCA1Q9BUE6 129 aa26.44■■□□□ 1.82
PABPC1-217ENST00000521067 TMX4Q9H1E5 349 aaPredicted RBP26.44■■□□□ 1.82
PABPC1-217ENST00000521067 VPS33BQ9H267 617 aa26.44■■□□□ 1.82
PABPC1-217ENST00000521067 MBIPQ9NS73 344 aa26.44■■□□□ 1.82
PABPC1-217ENST00000521067 ZNF853P0CG23 659 aa26.43■■□□□ 1.82
PABPC1-217ENST00000521067 LMOD1P29536 600 aaPredicted RBP26.43■■□□□ 1.82
PABPC1-217ENST00000521067 GRAPQ13588 217 aa26.43■■□□□ 1.82
PABPC1-217ENST00000521067 DDX46Q7L014 1031 aaKnown RBP26.43■■□□□ 1.82
PABPC1-217ENST00000521067 GRAPLQ8TC17 118 aaPredicted RBP26.43■■□□□ 1.82
PABPC1-217ENST00000521067 DBF4Q9UBU7 674 aaPredicted RBP26.43■■□□□ 1.82
PABPC1-217ENST00000521067 ATP5J2-PTCD1G3V325 749 aa26.42■■□□□ 1.82
PABPC1-217ENST00000521067 DPP8Q6V1X1 898 aaPredicted RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms