RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 NUP98P52948 1817 aa14.22□□□□□ -0.13
PVT1-208ENST00000519481 UBN2Q6ZU65 1347 aa14.21□□□□□ -0.13
PVT1-208ENST00000519481 HOXA10P31260 410 aaPredicted RBP14.21□□□□□ -0.13
PVT1-208ENST00000519481 HSP90AB3PQ58FF7 597 aa14.21□□□□□ -0.13
PVT1-208ENST00000519481 OLFM4Q6UX06 510 aa14.21□□□□□ -0.13
PVT1-208ENST00000519481 CCDC146Q8IYE0 955 aa14.21□□□□□ -0.13
PVT1-208ENST00000519481 RUNDC1Q96C34 613 aa14.21□□□□□ -0.13
PVT1-208ENST00000519481 L3MBTL3Q96JM7 780 aaPredicted RBP14.21□□□□□ -0.13
PVT1-208ENST00000519481 NLRP3Q96P20 1036 aa14.21□□□□□ -0.13
PVT1-208ENST00000519481 PSMD1Q99460 953 aa14.21□□□□□ -0.13
PVT1-208ENST00000519481 RIC1Q4ADV7 1423 aa14.21□□□□□ -0.13
PVT1-208ENST00000519481 NTSR2O95665 410 aa14.2□□□□□ -0.14
PVT1-208ENST00000519481 LDHDQ86WU2 507 aa14.2□□□□□ -0.14
PVT1-208ENST00000519481 CRAMP1Q96RY5 1269 aa14.2□□□□□ -0.14
PVT1-208ENST00000519481 UTP14AQ9BVJ6 771 aaKnown RBP14.2□□□□□ -0.14
PVT1-208ENST00000519481 LAS1LQ9Y4W2 734 aaKnown RBP14.2□□□□□ -0.14
PVT1-208ENST00000519481 EIF6P56537 245 aaKnown RBP14.19□□□□□ -0.14
PVT1-208ENST00000519481 AIMP1Q12904 312 aaKnown RBP14.19□□□□□ -0.14
PVT1-208ENST00000519481 NECTIN2Q92692 538 aa14.19□□□□□ -0.14
PVT1-208ENST00000519481 TAF1DQ9H5J8 278 aaPredicted RBP14.19□□□□□ -0.14
PVT1-208ENST00000519481 HACL1Q9UJ83 578 aa14.19□□□□□ -0.14
PVT1-208ENST00000519481 RNF123Q5XPI4 1314 aa14.18□□□□□ -0.14
PVT1-208ENST00000519481 FZD9O00144 591 aa14.18□□□□□ -0.14
PVT1-208ENST00000519481 PPEF1O14829 653 aaPredicted RBP14.18□□□□□ -0.14
PVT1-208ENST00000519481 ANXA1P04083 346 aa14.18□□□□□ -0.14
PVT1-208ENST00000519481 PDIA6Q15084 440 aa14.18□□□□□ -0.14
PVT1-208ENST00000519481 EAPPQ56P03 285 aaPredicted RBP14.18□□□□□ -0.14
PVT1-208ENST00000519481 COPS6Q7L5N1 327 aa14.18□□□□□ -0.14
PVT1-208ENST00000519481 DDX21Q9NR30 783 aaKnown RBP eCLIP14.18□□□□□ -0.14
PVT1-208ENST00000519481 CLEC11AQ9Y240 323 aa14.18□□□□□ -0.14
PVT1-208ENST00000519481 ZNF541Q9H0D2 1346 aa14.17□□□□□ -0.14
PVT1-208ENST00000519481 CHL1O00533 1208 aa14.17□□□□□ -0.14
PVT1-208ENST00000519481 TCERG1O14776 1098 aaKnown RBP14.17□□□□□ -0.14
PVT1-208ENST00000519481 PROSER3Q2NL68 480 aa14.17□□□□□ -0.14
PVT1-208ENST00000519481 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
PVT1-208ENST00000519481 LRP10Q7Z4F1 713 aa14.17□□□□□ -0.14
PVT1-208ENST00000519481 PNMA8AQ86V59 439 aaPredicted RBP14.17□□□□□ -0.14
PVT1-208ENST00000519481 GPC2Q8N158 579 aa14.17□□□□□ -0.14
PVT1-208ENST00000519481 LARGE2Q8N3Y3 721 aa14.17□□□□□ -0.14
PVT1-208ENST00000519481 XAGE3Q8WTP9 111 aa14.17□□□□□ -0.14
PVT1-208ENST00000519481 CREBZFQ9NS37 354 aa14.17□□□□□ -0.14
PVT1-208ENST00000519481 SCN4AP35499 1836 aa14.16□□□□□ -0.14
PVT1-208ENST00000519481 POTEIP0CG38 1075 aa14.16□□□□□ -0.14
PVT1-208ENST00000519481 POTEJP0CG39 1038 aa14.16□□□□□ -0.14
PVT1-208ENST00000519481 LMOD1P29536 600 aaPredicted RBP14.16□□□□□ -0.14
PVT1-208ENST00000519481 EPHX2P34913 555 aa14.16□□□□□ -0.14
PVT1-208ENST00000519481 SLC10A5Q5PT55 438 aa14.16□□□□□ -0.14
PVT1-208ENST00000519481 ADAMTS8Q9UP79 889 aa14.16□□□□□ -0.14
PVT1-208ENST00000519481 GJA3Q9Y6H8 435 aa14.16□□□□□ -0.14
PVT1-208ENST00000519481 HOXB7P09629 217 aa14.15□□□□□ -0.14
PVT1-208ENST00000519481 TCIRG1Q13488 830 aa14.15□□□□□ -0.14
PVT1-208ENST00000519481 HDGFL1Q5TGJ6 251 aa14.15□□□□□ -0.14
PVT1-208ENST00000519481 NIM1KQ8IY84 436 aa14.15□□□□□ -0.14
PVT1-208ENST00000519481 SUPT20HQ8NEM7 779 aa14.15□□□□□ -0.14
PVT1-208ENST00000519481 TRMT112Q9UI30 125 aaKnown RBP14.15□□□□□ -0.14
PVT1-208ENST00000519481 TRIM35Q9UPQ4 493 aa14.15□□□□□ -0.14
PVT1-208ENST00000519481 BBOX1O75936 387 aa14.14□□□□□ -0.15
PVT1-208ENST00000519481 DDX46Q7L014 1031 aaKnown RBP14.14□□□□□ -0.15
PVT1-208ENST00000519481 NLRP10Q86W26 655 aa14.14□□□□□ -0.15
PVT1-208ENST00000519481 VPS33BQ9H267 617 aa14.14□□□□□ -0.15
PVT1-208ENST00000519481 CHPF2Q9P2E5 772 aa14.14□□□□□ -0.15
PVT1-208ENST00000519481 DBF4Q9UBU7 674 aaPredicted RBP14.14□□□□□ -0.15
PVT1-208ENST00000519481 ATP6V0A2Q9Y487 856 aa14.14□□□□□ -0.15
PVT1-208ENST00000519481 SH3TC1Q8TE82 1336 aa14.14□□□□□ -0.15
PVT1-208ENST00000519481 PPIP5K2O43314 1243 aa14.13□□□□□ -0.15
PVT1-208ENST00000519481 HSPA1AP0DMV8 641 aaKnown RBP14.13□□□□□ -0.15
PVT1-208ENST00000519481 HSPA1BP0DMV9 641 aaKnown RBP14.13□□□□□ -0.15
PVT1-208ENST00000519481 CALD1Q05682 793 aaKnown RBP14.13□□□□□ -0.15
PVT1-208ENST00000519481 KRT24Q2M2I5 525 aa14.13□□□□□ -0.15
PVT1-208ENST00000519481 C3orf67Q6ZVT6 689 aa14.13□□□□□ -0.15
PVT1-208ENST00000519481 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
PVT1-208ENST00000519481 PRKRIP1Q9H875 184 aaPredicted RBP14.13□□□□□ -0.15
PVT1-208ENST00000519481 MKRN1Q9UHC7 482 aaKnown RBP14.13□□□□□ -0.15
PVT1-208ENST00000519481 SNED1Q8TER0 1413 aa14.13□□□□□ -0.15
PVT1-208ENST00000519481 TMEM88BA6NKF7 163 aa14.12□□□□□ -0.15
PVT1-208ENST00000519481 HCLS1P14317 486 aaPredicted RBP14.12□□□□□ -0.15
PVT1-208ENST00000519481 ANKRD13DQ6ZTN6 518 aa14.12□□□□□ -0.15
PVT1-208ENST00000519481 PLBD2Q8NHP8 589 aa14.12□□□□□ -0.15
PVT1-208ENST00000519481 HYPKQ9NX55 129 aa14.12□□□□□ -0.15
PVT1-208ENST00000519481 ABCC4O15439 1325 aa14.12□□□□□ -0.15
PVT1-208ENST00000519481 KCNA4P22459 653 aa14.11□□□□□ -0.15
PVT1-208ENST00000519481 DUSP27Q5VZP5 1158 aa14.11□□□□□ -0.15
PVT1-208ENST00000519481 DPP8Q6V1X1 898 aaPredicted RBP14.11□□□□□ -0.15
PVT1-208ENST00000519481 TMC4Q7Z404 712 aa14.11□□□□□ -0.15
PVT1-208ENST00000519481 SP8Q8IXZ3 490 aa14.11□□□□□ -0.15
PVT1-208ENST00000519481 CNTROBQ8N137 903 aa14.11□□□□□ -0.15
PVT1-208ENST00000519481 MPNDQ8N594 471 aa14.11□□□□□ -0.15
PVT1-208ENST00000519481 PASKQ96RG2 1323 aa14.11□□□□□ -0.15
PVT1-208ENST00000519481 ITGBL1O95965 494 aaPredicted RBP14.1□□□□□ -0.15
PVT1-208ENST00000519481 GRAPQ13588 217 aa14.1□□□□□ -0.15
PVT1-208ENST00000519481 AOC3Q16853 763 aa14.1□□□□□ -0.15
PVT1-208ENST00000519481 GRAPLQ8TC17 118 aaPredicted RBP14.1□□□□□ -0.15
PVT1-208ENST00000519481 CHMP4AQ9BY43 222 aa14.1□□□□□ -0.15
PVT1-208ENST00000519481 APAF1O14727 1248 aa14.09□□□□□ -0.15
PVT1-208ENST00000519481 GNAI1P63096 354 aa14.09□□□□□ -0.15
PVT1-208ENST00000519481 COL13A1Q5TAT6 717 aaPredicted RBP14.09□□□□□ -0.15
PVT1-208ENST00000519481 MAP1SQ66K74 1059 aaPredicted RBP14.09□□□□□ -0.15
PVT1-208ENST00000519481 MBIPQ9NS73 344 aa14.09□□□□□ -0.15
PVT1-208ENST00000519481 ANKRD36CQ5JPF3 1778 aa14.09□□□□□ -0.15
PVT1-208ENST00000519481 CNTNAP1P78357 1384 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 238.9 ms