RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 NUTM1Q86Y26 1132 aa18.07■□□□□ 0.48
VDAC3-204ENST00000519072 SYNE4Q8N205 404 aa18.07■□□□□ 0.48
VDAC3-204ENST00000519072 PSMD1Q99460 953 aa18.07■□□□□ 0.48
VDAC3-204ENST00000519072 ERBB4Q15303 1308 aa18.06■□□□□ 0.48
VDAC3-204ENST00000519072 FZD9O00144 591 aa18.06■□□□□ 0.48
VDAC3-204ENST00000519072 CC2D2BQ6DHV5 1058 aa18.06■□□□□ 0.48
VDAC3-204ENST00000519072 THUMPD2Q9BTF0 503 aaKnown RBP18.06■□□□□ 0.48
VDAC3-204ENST00000519072 PNNQ9H307 717 aaKnown RBP18.06■□□□□ 0.48
VDAC3-204ENST00000519072 MKRN1Q9UHC7 482 aaKnown RBP18.06■□□□□ 0.48
VDAC3-204ENST00000519072 HACL1Q9UJ83 578 aa18.06■□□□□ 0.48
VDAC3-204ENST00000519072 UBN2Q6ZU65 1347 aa18.05■□□□□ 0.48
VDAC3-204ENST00000519072 MAPK8IP3Q9UPT6 1336 aa18.05■□□□□ 0.48
VDAC3-204ENST00000519072 MYL6BP14649 208 aa18.05■□□□□ 0.48
VDAC3-204ENST00000519072 HOXA10P31260 410 aaPredicted RBP18.05■□□□□ 0.48
VDAC3-204ENST00000519072 CNTNAP1P78357 1384 aa18.04■□□□□ 0.48
VDAC3-204ENST00000519072 ITGBL1O95965 494 aaPredicted RBP18.04■□□□□ 0.48
VDAC3-204ENST00000519072 GPTP24298 496 aa18.04■□□□□ 0.48
VDAC3-204ENST00000519072 EPHX2P34913 555 aa18.04■□□□□ 0.48
VDAC3-204ENST00000519072 EAPPQ56P03 285 aaPredicted RBP18.04■□□□□ 0.48
VDAC3-204ENST00000519072 ZNF34Q8IZ26 560 aa18.04■□□□□ 0.48
VDAC3-204ENST00000519072 ZBTB3Q9H5J0 574 aa18.04■□□□□ 0.48
VDAC3-204ENST00000519072 GRIPAP1Q4V328 841 aa18.03■□□□□ 0.48
VDAC3-204ENST00000519072 SUSD4Q5VX71 490 aa18.03■□□□□ 0.48
VDAC3-204ENST00000519072 GIGYF2Q6Y7W6 1299 aaKnown RBP18.03■□□□□ 0.48
VDAC3-204ENST00000519072 PNMA8AQ86V59 439 aaPredicted RBP18.03■□□□□ 0.48
VDAC3-204ENST00000519072 GPC2Q8N158 579 aa18.03■□□□□ 0.48
VDAC3-204ENST00000519072 JDP2Q8WYK2 163 aa18.03■□□□□ 0.48
VDAC3-204ENST00000519072 RPGRQ92834 1020 aaKnown RBP18.03■□□□□ 0.48
VDAC3-204ENST00000519072 COL4A5P29400 1685 aa18.03■□□□□ 0.48
VDAC3-204ENST00000519072 RNF123Q5XPI4 1314 aa18.02■□□□□ 0.48
VDAC3-204ENST00000519072 NTSR2O95665 410 aa18.02■□□□□ 0.48
VDAC3-204ENST00000519072 CRAMP1Q96RY5 1269 aa18.02■□□□□ 0.48
VDAC3-204ENST00000519072 TMEM88BA6NKF7 163 aa18.01■□□□□ 0.47
VDAC3-204ENST00000519072 RBM17Q96I25 401 aaKnown RBP18.01■□□□□ 0.47
VDAC3-204ENST00000519072 TSPYL4Q9UJ04 414 aa18.01■□□□□ 0.47
VDAC3-204ENST00000519072 CLEC11AQ9Y240 323 aa18.01■□□□□ 0.47
VDAC3-204ENST00000519072 ANKRD36CQ5JPF3 1778 aa18.01■□□□□ 0.47
VDAC3-204ENST00000519072 PARP10Q53GL7 1025 aa18■□□□□ 0.47
VDAC3-204ENST00000519072 LRP10Q7Z4F1 713 aa18■□□□□ 0.47
VDAC3-204ENST00000519072 PPP1R42Q7Z4L9 355 aa18■□□□□ 0.47
VDAC3-204ENST00000519072 LTBP1Q14766 1721 aa18■□□□□ 0.47
VDAC3-204ENST00000519072 EIF6P56537 245 aaKnown RBP17.99■□□□□ 0.47
VDAC3-204ENST00000519072 BABAM1Q9NWV8 329 aa17.99■□□□□ 0.47
VDAC3-204ENST00000519072 LAMB2P55268 1798 aa17.99■□□□□ 0.47
VDAC3-204ENST00000519072 PPEF1O14829 653 aaPredicted RBP17.98■□□□□ 0.47
VDAC3-204ENST00000519072 DSG3P32926 999 aa17.98■□□□□ 0.47
VDAC3-204ENST00000519072 PDIA6Q15084 440 aa17.98■□□□□ 0.47
VDAC3-204ENST00000519072 C3orf67Q6ZVT6 689 aa17.98■□□□□ 0.47
VDAC3-204ENST00000519072 CNTROBQ8N137 903 aa17.98■□□□□ 0.47
VDAC3-204ENST00000519072 VEGFBP49765 207 aa17.97■□□□□ 0.47
VDAC3-204ENST00000519072 RIPK4P57078 832 aa17.97■□□□□ 0.47
VDAC3-204ENST00000519072 SLC10A5Q5PT55 438 aa17.97■□□□□ 0.47
VDAC3-204ENST00000519072 MAP1SQ66K74 1059 aaPredicted RBP17.97■□□□□ 0.47
VDAC3-204ENST00000519072 LARGE2Q8N3Y3 721 aa17.97■□□□□ 0.47
VDAC3-204ENST00000519072 NLRP3Q96P20 1036 aa17.97■□□□□ 0.47
VDAC3-204ENST00000519072 GJA3Q9Y6H8 435 aa17.97■□□□□ 0.47
VDAC3-204ENST00000519072 FOXN1O15353 648 aa17.96■□□□□ 0.47
VDAC3-204ENST00000519072 EIF2S2P20042 333 aaKnown RBP17.96■□□□□ 0.47
VDAC3-204ENST00000519072 LMOD1P29536 600 aaPredicted RBP17.96■□□□□ 0.47
VDAC3-204ENST00000519072 SLC51AQ86UW1 340 aa17.96■□□□□ 0.47
VDAC3-204ENST00000519072 UTP14AQ9BVJ6 771 aaKnown RBP17.96■□□□□ 0.47
VDAC3-204ENST00000519072 RASSF10A6NK89 507 aa17.95■□□□□ 0.46
VDAC3-204ENST00000519072 SCNN1DP51172 638 aa17.95■□□□□ 0.46
VDAC3-204ENST00000519072 LMOD3Q0VAK6 560 aa17.95■□□□□ 0.46
VDAC3-204ENST00000519072 PROSER3Q2NL68 480 aa17.95■□□□□ 0.46
VDAC3-204ENST00000519072 TRPM7Q96QT4 1865 aa17.95■□□□□ 0.46
VDAC3-204ENST00000519072 TCERG1O14776 1098 aaKnown RBP17.94■□□□□ 0.46
VDAC3-204ENST00000519072 ANXA1P04083 346 aa17.94■□□□□ 0.46
VDAC3-204ENST00000519072 TMPOP42166 694 aaKnown RBP17.94■□□□□ 0.46
VDAC3-204ENST00000519072 RALBP1Q15311 655 aa17.94■□□□□ 0.46
VDAC3-204ENST00000519072 TMX4Q9H1E5 349 aaPredicted RBP17.94■□□□□ 0.46
VDAC3-204ENST00000519072 VPS33BQ9H267 617 aa17.94■□□□□ 0.46
VDAC3-204ENST00000519072 ATP6V0A2Q9Y487 856 aa17.94■□□□□ 0.46
VDAC3-204ENST00000519072 PPIP5K2O43314 1243 aa17.93■□□□□ 0.46
VDAC3-204ENST00000519072 EPS15P42566 896 aa17.93■□□□□ 0.46
VDAC3-204ENST00000519072 DEFB115Q30KQ5 88 aa17.93■□□□□ 0.46
VDAC3-204ENST00000519072 HSP90AB3PQ58FF7 597 aa17.93■□□□□ 0.46
VDAC3-204ENST00000519072 NIM1KQ8IY84 436 aa17.93■□□□□ 0.46
VDAC3-204ENST00000519072 AIDAQ96BJ3 306 aa17.93■□□□□ 0.46
VDAC3-204ENST00000519072 PRDM10Q9NQV6 1147 aa17.93■□□□□ 0.46
VDAC3-204ENST00000519072 ABCC4O15439 1325 aa17.93■□□□□ 0.46
VDAC3-204ENST00000519072 CTCFP49711 727 aaPredicted RBP17.92■□□□□ 0.46
VDAC3-204ENST00000519072 DDX21Q9NR30 783 aaKnown RBP eCLIP17.92■□□□□ 0.46
VDAC3-204ENST00000519072 WBP1LQ9NX94 342 aa17.92■□□□□ 0.46
VDAC3-204ENST00000519072 AOC3Q16853 763 aa17.91■□□□□ 0.46
VDAC3-204ENST00000519072 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
VDAC3-204ENST00000519072 USP50Q70EL3 339 aaPredicted RBP17.91■□□□□ 0.46
VDAC3-204ENST00000519072 COPS6Q7L5N1 327 aa17.91■□□□□ 0.46
VDAC3-204ENST00000519072 NLRP10Q86W26 655 aa17.91■□□□□ 0.46
VDAC3-204ENST00000519072 SUPT20HQ8NEM7 779 aa17.91■□□□□ 0.46
VDAC3-204ENST00000519072 RTFDC1Q9BY42 306 aaPredicted RBP17.91■□□□□ 0.46
VDAC3-204ENST00000519072 TAF1P21675 1872 aa17.9■□□□□ 0.46
VDAC3-204ENST00000519072 BBOX1O75936 387 aa17.9■□□□□ 0.46
VDAC3-204ENST00000519072 XAGE3Q8WTP9 111 aa17.9■□□□□ 0.46
VDAC3-204ENST00000519072 THSD7BQ9C0I4 1608 aa17.9■□□□□ 0.46
VDAC3-204ENST00000519072 AIMP1Q12904 312 aaKnown RBP17.89■□□□□ 0.45
VDAC3-204ENST00000519072 TCIRG1Q13488 830 aa17.89■□□□□ 0.45
VDAC3-204ENST00000519072 SP8Q8IXZ3 490 aa17.89■□□□□ 0.45
VDAC3-204ENST00000519072 NECTIN2Q92692 538 aa17.89■□□□□ 0.45
VDAC3-204ENST00000519072 GPRC5DQ9NZD1 345 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms