RNA–Protein interactions for RNA: ENST00000513997.1

DDX60-205, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-205ENST00000513997 G3BP2Q9UN86 482 aaKnown RBP11.53□□□□□ -0.56
DDX60-205ENST00000513997 WASF2Q9Y6W5 498 aa11.53□□□□□ -0.56
DDX60-205ENST00000513997 PPP1R12AO14974 1030 aaPredicted RBP11.52□□□□□ -0.57
DDX60-205ENST00000513997 NNTQ13423 1086 aa11.52□□□□□ -0.57
DDX60-205ENST00000513997 PPP1R26Q5T8A7 1209 aaPredicted RBP11.52□□□□□ -0.57
DDX60-205ENST00000513997 SCG3Q8WXD2 468 aaKnown RBP11.52□□□□□ -0.57
DDX60-205ENST00000513997 TMPRSS4Q9NRS4 437 aa11.52□□□□□ -0.57
DDX60-205ENST00000513997 ZNF358Q9NW07 568 aa11.52□□□□□ -0.57
DDX60-205ENST00000513997 STIM2Q9P246 746 aa11.52□□□□□ -0.57
DDX60-205ENST00000513997 GGT7Q9UJ14 662 aa11.52□□□□□ -0.57
DDX60-205ENST00000513997 EIF3JO75822 258 aaKnown RBP11.51□□□□□ -0.57
DDX60-205ENST00000513997 SMPD1P17405 629 aa11.51□□□□□ -0.57
DDX60-205ENST00000513997 PAK2Q13177 524 aa11.51□□□□□ -0.57
DDX60-205ENST00000513997 PMM1Q92871 262 aa11.51□□□□□ -0.57
DDX60-205ENST00000513997 GPRASP2Q96D09 838 aa11.51□□□□□ -0.57
DDX60-205ENST00000513997 TNFRSF10BO14763 440 aa11.5□□□□□ -0.57
DDX60-205ENST00000513997 MZF1P28698 734 aaPredicted RBP11.5□□□□□ -0.57
DDX60-205ENST00000513997 TMX1Q9H3N1 280 aa11.5□□□□□ -0.57
DDX60-205ENST00000513997 PDZRN3Q9UPQ7 1066 aa11.5□□□□□ -0.57
DDX60-205ENST00000513997 SCTRP47872 440 aa11.49□□□□□ -0.57
DDX60-205ENST00000513997 CCAR1Q8IX12 1150 aaKnown RBP11.49□□□□□ -0.57
DDX60-205ENST00000513997 GJD3Q8N144 294 aa11.49□□□□□ -0.57
DDX60-205ENST00000513997 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.49□□□□□ -0.57
DDX60-205ENST00000513997 ERVK-9P63128 1117 aa11.48□□□□□ -0.57
DDX60-205ENST00000513997 AMPD3Q01432 767 aa11.48□□□□□ -0.57
DDX60-205ENST00000513997 CCDC146Q8IYE0 955 aa11.48□□□□□ -0.57
DDX60-205ENST00000513997 ZNF784Q8NCA9 323 aaPredicted RBP11.48□□□□□ -0.57
DDX60-205ENST00000513997 KLF16Q9BXK1 252 aaPredicted RBP11.48□□□□□ -0.57
DDX60-205ENST00000513997 SIRPGQ9P1W8 387 aa11.48□□□□□ -0.57
DDX60-205ENST00000513997 ATAD2Q6PL18 1390 aa11.48□□□□□ -0.57
DDX60-205ENST00000513997 LILRA1O75019 489 aa11.47□□□□□ -0.57
DDX60-205ENST00000513997 EIF4BP23588 611 aaKnown RBP11.47□□□□□ -0.57
DDX60-205ENST00000513997 SRPK1Q96SB4 655 aaKnown RBP11.47□□□□□ -0.57
DDX60-205ENST00000513997 NEUROD4Q9HD90 331 aa11.47□□□□□ -0.57
DDX60-205ENST00000513997 IRX6P78412 446 aaPredicted RBP11.46□□□□□ -0.57
DDX60-205ENST00000513997 RASGRP4Q8TDF6 673 aa11.46□□□□□ -0.57
DDX60-205ENST00000513997 CSRNP1Q96S65 589 aa11.46□□□□□ -0.57
DDX60-205ENST00000513997 SLKQ9H2G2 1235 aaPredicted RBP11.46□□□□□ -0.57
DDX60-205ENST00000513997 PGPEP1Q9NXJ5 209 aa11.46□□□□□ -0.57
DDX60-205ENST00000513997 SPG7Q9UQ90 795 aa11.46□□□□□ -0.57
DDX60-205ENST00000513997 USP31Q70CQ4 1352 aa11.45□□□□□ -0.58
DDX60-205ENST00000513997 COX20Q5RI15 118 aa11.45□□□□□ -0.58
DDX60-205ENST00000513997 FMNL3Q8IVF7 1028 aa11.45□□□□□ -0.58
DDX60-205ENST00000513997 ABTB2Q8N961 1025 aa11.45□□□□□ -0.58
DDX60-205ENST00000513997 HPS1Q92902 700 aa11.45□□□□□ -0.58
DDX60-205ENST00000513997 TRIM52Q96A61 297 aa11.45□□□□□ -0.58
DDX60-205ENST00000513997 TYW1Q9NV66 732 aaKnown RBP11.45□□□□□ -0.58
DDX60-205ENST00000513997 TMEM229AB2RXF0 380 aa11.44□□□□□ -0.58
DDX60-205ENST00000513997 MYCP01106 439 aaPredicted RBP11.44□□□□□ -0.58
DDX60-205ENST00000513997 PDGFRBP09619 1106 aa11.44□□□□□ -0.58
DDX60-205ENST00000513997 ADD1P35611 737 aaKnown RBP11.44□□□□□ -0.58
DDX60-205ENST00000513997 TBX4P57082 545 aa11.44□□□□□ -0.58
DDX60-205ENST00000513997 ITPKCQ96DU7 683 aa11.44□□□□□ -0.58
DDX60-205ENST00000513997 ZNF408Q9H9D4 720 aa11.44□□□□□ -0.58
DDX60-205ENST00000513997 PRR12Q9ULL5 1215 aa11.44□□□□□ -0.58
DDX60-205ENST00000513997 POLIQ9UNA4 740 aa11.44□□□□□ -0.58
DDX60-205ENST00000513997 SSBP05455 408 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDX60-205ENST00000513997 TNS4Q8IZW8 715 aa11.43□□□□□ -0.58
DDX60-205ENST00000513997 CHMP7Q8WUX9 453 aaPredicted RBP11.43□□□□□ -0.58
DDX60-205ENST00000513997 JDP2Q8WYK2 163 aa11.43□□□□□ -0.58
DDX60-205ENST00000513997 SEC16BQ96JE7 1060 aa11.43□□□□□ -0.58
DDX60-205ENST00000513997 SPOCK3Q9BQ16 436 aa11.43□□□□□ -0.58
DDX60-205ENST00000513997 OSBPL3Q9H4L5 887 aa11.43□□□□□ -0.58
DDX60-205ENST00000513997 ZBTB39O15060 712 aa11.42□□□□□ -0.58
DDX60-205ENST00000513997 TIMP2P16035 220 aa11.42□□□□□ -0.58
DDX60-205ENST00000513997 WDR4P57081 412 aaKnown RBP11.42□□□□□ -0.58
DDX60-205ENST00000513997 NFX1Q12986 1120 aaKnown RBP11.42□□□□□ -0.58
DDX60-205ENST00000513997 APBB1IPQ7Z5R6 666 aaPredicted RBP11.42□□□□□ -0.58
DDX60-205ENST00000513997 ATCAYQ86WG3 371 aa11.42□□□□□ -0.58
DDX60-205ENST00000513997 CREB3O43889 395 aa11.41□□□□□ -0.58
DDX60-205ENST00000513997 CDC45O75419 566 aa11.41□□□□□ -0.58
DDX60-205ENST00000513997 ZIC2O95409 532 aaPredicted RBP11.41□□□□□ -0.58
DDX60-205ENST00000513997 USP5P45974 858 aa11.41□□□□□ -0.58
DDX60-205ENST00000513997 TSPAN10Q9H1Z9 355 aaPredicted RBP11.41□□□□□ -0.58
DDX60-205ENST00000513997 ESF1Q9H501 851 aaKnown RBP11.41□□□□□ -0.58
DDX60-205ENST00000513997 ZFAND3Q9H8U3 227 aa11.41□□□□□ -0.58
DDX60-205ENST00000513997 SNTG2Q9NY99 539 aa11.41□□□□□ -0.58
DDX60-205ENST00000513997 A0A1W2PRU2 124 aa11.4□□□□□ -0.58
DDX60-205ENST00000513997 GFRA3O60609 400 aa11.4□□□□□ -0.58
DDX60-205ENST00000513997 EPHA4P54764 986 aa11.4□□□□□ -0.58
DDX60-205ENST00000513997 CCDC136Q96JN2 1154 aa11.4□□□□□ -0.58
DDX60-205ENST00000513997 BACH1O14867 736 aa11.39□□□□□ -0.59
DDX60-205ENST00000513997 CHMP4BP1P59074 171 aa11.39□□□□□ -0.59
DDX60-205ENST00000513997 CBLBQ13191 982 aa11.39□□□□□ -0.59
DDX60-205ENST00000513997 RASA3Q14644 834 aa11.39□□□□□ -0.59
DDX60-205ENST00000513997 Q6ZVU0 165 aa11.39□□□□□ -0.59
DDX60-205ENST00000513997 ANKS3Q6ZW76 656 aa11.39□□□□□ -0.59
DDX60-205ENST00000513997 ERMP1Q7Z2K6 904 aa11.39□□□□□ -0.59
DDX60-205ENST00000513997 DEPDC7Q96QD5 511 aa11.39□□□□□ -0.59
DDX60-205ENST00000513997 UBA5Q9GZZ9 404 aa11.39□□□□□ -0.59
DDX60-205ENST00000513997 FANCLQ9NW38 375 aa11.39□□□□□ -0.59
DDX60-205ENST00000513997 GEMIN8Q9NWZ8 242 aaKnown RBP11.39□□□□□ -0.59
DDX60-205ENST00000513997 EIF1AYO14602 144 aaKnown RBP11.38□□□□□ -0.59
DDX60-205ENST00000513997 OPLAHO14841 1288 aa11.38□□□□□ -0.59
DDX60-205ENST00000513997 RHBDL3P58872 404 aa11.38□□□□□ -0.59
DDX60-205ENST00000513997 ORC1Q13415 861 aa11.38□□□□□ -0.59
DDX60-205ENST00000513997 RALBP1Q15311 655 aa11.38□□□□□ -0.59
DDX60-205ENST00000513997 TAF1CQ15572 869 aaPredicted RBP11.38□□□□□ -0.59
DDX60-205ENST00000513997 HSP90AB4PQ58FF6 505 aa11.38□□□□□ -0.59
DDX60-205ENST00000513997 ARSHQ5FYA8 562 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms