RNA–Protein interactions for RNA: ENST00000513997.1

DDX60-205, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-205ENST00000513997 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
DDX60-205ENST00000513997 CHIC1Q5VXU3 224 aa29.35■■■□□ 2.29
DDX60-205ENST00000513997 PHF23Q9BUL5 403 aaPredicted RBP25.88■■□□□ 1.73
DDX60-205ENST00000513997 SENP3Q9H4L4 574 aaPredicted RBP25.17■■□□□ 1.62
DDX60-205ENST00000513997 PLPPR3Q6T4P5 718 aa23.94■■□□□ 1.42
DDX60-205ENST00000513997 FOXD1Q16676 465 aa23.35■■□□□ 1.33
DDX60-205ENST00000513997 PPP6R1Q9UPN7 881 aa22.74■■□□□ 1.23
DDX60-205ENST00000513997 ADRA2BP18089 450 aa22.71■■□□□ 1.23
DDX60-205ENST00000513997 PIAS4Q8N2W9 510 aaPredicted RBP22.07■■□□□ 1.12
DDX60-205ENST00000513997 MSH5O43196 834 aa21.38■■□□□ 1.01
DDX60-205ENST00000513997 PPP4R3CPQ6ZMV5 832 aa21.16■□□□□ 0.98
DDX60-205ENST00000513997 KCNA4P22459 653 aa21.02■□□□□ 0.96
DDX60-205ENST00000513997 SCAF1Q9H7N4 1312 aaKnown RBP20.74■□□□□ 0.91
DDX60-205ENST00000513997 NCBP3Q53F19 620 aaKnown RBP20.66■□□□□ 0.9
DDX60-205ENST00000513997 MAPK8IP2Q13387 824 aaPredicted RBP20.53■□□□□ 0.88
DDX60-205ENST00000513997 CNKSR2Q8WXI2 1034 aa20.48■□□□□ 0.87
DDX60-205ENST00000513997 EHMT2Q96KQ7 1210 aa20.41■□□□□ 0.86
DDX60-205ENST00000513997 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.85
DDX60-205ENST00000513997 DMRT2Q9Y5R5 561 aa20.16■□□□□ 0.82
DDX60-205ENST00000513997 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
DDX60-205ENST00000513997 RNF216Q9NWF9 866 aaPredicted RBP20.02■□□□□ 0.8
DDX60-205ENST00000513997 HOXD11P31277 338 aaPredicted RBP19.87■□□□□ 0.77
DDX60-205ENST00000513997 DNAJC5BQ9UF47 199 aa19.78■□□□□ 0.76
DDX60-205ENST00000513997 SLC24A1O60721 1099 aa19.68■□□□□ 0.74
DDX60-205ENST00000513997 CSRNP3Q8WYN3 585 aa19.5■□□□□ 0.71
DDX60-205ENST00000513997 ZBTB22O15209 634 aa19.37■□□□□ 0.69
DDX60-205ENST00000513997 FOXD4L1Q9NU39 408 aa19.23■□□□□ 0.67
DDX60-205ENST00000513997 DCAF8L1A6NGE4 600 aa19.22■□□□□ 0.67
DDX60-205ENST00000513997 SLC4A2P04920 1241 aa19.21■□□□□ 0.67
DDX60-205ENST00000513997 POTEDQ86YR6 584 aa18.96■□□□□ 0.63
DDX60-205ENST00000513997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.62
DDX60-205ENST00000513997 MYCNP04198 464 aaPredicted RBP18.81■□□□□ 0.6
DDX60-205ENST00000513997 RTN4Q9NQC3 1192 aaKnown RBP18.8■□□□□ 0.6
DDX60-205ENST00000513997 AMER1Q5JTC6 1135 aaPredicted RBP18.75■□□□□ 0.59
DDX60-205ENST00000513997 U3KPZ7 1027 aaPredicted RBP18.66■□□□□ 0.58
DDX60-205ENST00000513997 ATXN8OSP0DMR3 200 aa18.55■□□□□ 0.56
DDX60-205ENST00000513997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
DDX60-205ENST00000513997 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
DDX60-205ENST00000513997 SAMD1Q6SPF0 538 aaPredicted RBP18.44■□□□□ 0.54
DDX60-205ENST00000513997 RNF39Q9H2S5 420 aa18.38■□□□□ 0.53
DDX60-205ENST00000513997 ATF5Q9Y2D1 282 aaPredicted RBP18.33■□□□□ 0.52
DDX60-205ENST00000513997 APLP2Q06481 763 aa18.2■□□□□ 0.5
DDX60-205ENST00000513997 C1QBPQ07021 282 aaKnown RBP18.17■□□□□ 0.5
DDX60-205ENST00000513997 SPINK5Q9NQ38 1064 aaPredicted RBP18.05■□□□□ 0.48
DDX60-205ENST00000513997 ZNF219Q9P2Y4 722 aaPredicted RBP17.99■□□□□ 0.47
DDX60-205ENST00000513997 CAPN15O75808 1086 aa17.93■□□□□ 0.46
DDX60-205ENST00000513997 TRHP20396 242 aaPredicted RBP17.92■□□□□ 0.46
DDX60-205ENST00000513997 POLA2Q14181 598 aa17.73■□□□□ 0.43
DDX60-205ENST00000513997 CACNB1Q02641 598 aaPredicted RBP17.65■□□□□ 0.42
DDX60-205ENST00000513997 ABCB7O75027 752 aa17.63■□□□□ 0.41
DDX60-205ENST00000513997 DSG3P32926 999 aa17.6■□□□□ 0.41
DDX60-205ENST00000513997 FKBP8Q14318 412 aa17.57■□□□□ 0.4
DDX60-205ENST00000513997 MKRN4PQ13434 485 aaPredicted RBP17.55■□□□□ 0.4
DDX60-205ENST00000513997 FBLN2P98095 1184 aa17.48■□□□□ 0.39
DDX60-205ENST00000513997 ZBTB12Q9Y330 459 aaPredicted RBP17.42■□□□□ 0.38
DDX60-205ENST00000513997 SPDYE4A6NLX3 237 aa17.27■□□□□ 0.36
DDX60-205ENST00000513997 PRKCSHP14314 528 aaPredicted RBP17.22■□□□□ 0.35
DDX60-205ENST00000513997 PLCB2Q00722 1185 aa17.21■□□□□ 0.35
DDX60-205ENST00000513997 BCANQ96GW7 911 aa17.14■□□□□ 0.33
DDX60-205ENST00000513997 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
DDX60-205ENST00000513997 TAOK2Q9UL54 1235 aa17.07■□□□□ 0.32
DDX60-205ENST00000513997 PROM2Q8N271 834 aa17.06■□□□□ 0.32
DDX60-205ENST00000513997 SPDYE2BA6NHP3 402 aa16.99■□□□□ 0.31
DDX60-205ENST00000513997 SPDYE6P0CI01 402 aa16.99■□□□□ 0.31
DDX60-205ENST00000513997 SPDYE2Q495Y8 402 aa16.99■□□□□ 0.31
DDX60-205ENST00000513997 ZNF692Q9BU19 519 aaPredicted RBP16.98■□□□□ 0.31
DDX60-205ENST00000513997 HAP1P54257 671 aaPredicted RBP16.96■□□□□ 0.31
DDX60-205ENST00000513997 SSUH2Q9Y2M2 353 aa16.92■□□□□ 0.3
DDX60-205ENST00000513997 FBXO3Q9UK99 471 aa16.85■□□□□ 0.29
DDX60-205ENST00000513997 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
DDX60-205ENST00000513997 DAXXQ9UER7 740 aaPredicted RBP16.77■□□□□ 0.28
DDX60-205ENST00000513997 TPRNQ4KMQ1 711 aa16.76■□□□□ 0.27
DDX60-205ENST00000513997 VSIG10Q8N0Z9 540 aa16.75■□□□□ 0.27
DDX60-205ENST00000513997 RBM42Q9BTD8 480 aaKnown RBP16.71■□□□□ 0.27
DDX60-205ENST00000513997 VASPP50552 380 aaPredicted RBP16.63■□□□□ 0.25
DDX60-205ENST00000513997 AKT1S1Q96B36 256 aa16.6■□□□□ 0.25
DDX60-205ENST00000513997 STAG3Q9UJ98 1225 aa16.55■□□□□ 0.24
DDX60-205ENST00000513997 TIMELESSQ9UNS1 1208 aa16.52■□□□□ 0.24
DDX60-205ENST00000513997 ARXQ96QS3 562 aa16.51■□□□□ 0.23
DDX60-205ENST00000513997 IFNLR1Q8IU57 520 aaPredicted RBP16.46■□□□□ 0.23
DDX60-205ENST00000513997 DCAF8L2P0C7V8 631 aa16.45■□□□□ 0.22
DDX60-205ENST00000513997 REM2Q8IYK8 340 aaPredicted RBP16.45■□□□□ 0.22
DDX60-205ENST00000513997 SPDYE1Q8NFV5 336 aaPredicted RBP16.42■□□□□ 0.22
DDX60-205ENST00000513997 KDM2AQ9Y2K7 1162 aa16.4■□□□□ 0.22
DDX60-205ENST00000513997 TULP1O00294 542 aaPredicted RBP16.38■□□□□ 0.21
DDX60-205ENST00000513997 MIER1Q8N108 512 aa16.34■□□□□ 0.21
DDX60-205ENST00000513997 PLCD3Q8N3E9 789 aa16.33■□□□□ 0.2
DDX60-205ENST00000513997 CLEC11AQ9Y240 323 aa16.32■□□□□ 0.2
DDX60-205ENST00000513997 PITPNM1O00562 1244 aa16.25■□□□□ 0.19
DDX60-205ENST00000513997 KLHL34Q8N239 644 aa16.25■□□□□ 0.19
DDX60-205ENST00000513997 PRR29P0C7W0 189 aa16.23■□□□□ 0.19
DDX60-205ENST00000513997 GTF3C3Q9Y5Q9 886 aa16.2■□□□□ 0.18
DDX60-205ENST00000513997 PLEKHG5O94827 1062 aa16.19■□□□□ 0.18
DDX60-205ENST00000513997 ERICH6Q7L0X2 663 aa16.19■□□□□ 0.18
DDX60-205ENST00000513997 SPOCK2Q92563 424 aa16.18■□□□□ 0.18
DDX60-205ENST00000513997 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.17■□□□□ 0.18
DDX60-205ENST00000513997 PKD2Q13563 968 aa16.15■□□□□ 0.18
DDX60-205ENST00000513997 BBXQ8WY36 941 aaPredicted RBP16.13■□□□□ 0.17
DDX60-205ENST00000513997 CREBZFQ9NS37 354 aa16.12■□□□□ 0.17
DDX60-205ENST00000513997 ZBTB47Q9UFB7 747 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms