RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 BRCA2P51587 3418 aa10.83□□□□□ -0.68
CLDND1-229ENST00000513988 TJP1Q07157 1748 aa10.83□□□□□ -0.68
CLDND1-229ENST00000513988 HTTP42858 3142 aa10.82□□□□□ -0.68
CLDND1-229ENST00000513988 GALR2O43603 387 aaPredicted RBP10.82□□□□□ -0.68
CLDND1-229ENST00000513988 EN2P19622 333 aaPredicted RBP10.82□□□□□ -0.68
CLDND1-229ENST00000513988 CDC37L1Q7L3B6 337 aa10.82□□□□□ -0.68
CLDND1-229ENST00000513988 SLC12A5Q9H2X9 1139 aa10.82□□□□□ -0.68
CLDND1-229ENST00000513988 RBBP6Q7Z6E9 1792 aaKnown RBP10.82□□□□□ -0.68
CLDND1-229ENST00000513988 CABP4P57796 275 aa10.81□□□□□ -0.68
CLDND1-229ENST00000513988 MIER1Q8N108 512 aa10.81□□□□□ -0.68
CLDND1-229ENST00000513988 CENPFP49454 3210 aa10.8□□□□□ -0.68
CLDND1-229ENST00000513988 SLC10A3P09131 477 aa10.8□□□□□ -0.68
CLDND1-229ENST00000513988 COL9A1P20849 921 aa10.8□□□□□ -0.68
CLDND1-229ENST00000513988 OLFM4Q6UX06 510 aa10.8□□□□□ -0.68
CLDND1-229ENST00000513988 C2orf69Q8N8R5 385 aa10.8□□□□□ -0.68
CLDND1-229ENST00000513988 FLT4P35916 1363 aa10.79□□□□□ -0.68
CLDND1-229ENST00000513988 TBC1D8O95759 1140 aa10.79□□□□□ -0.68
CLDND1-229ENST00000513988 ST5P78524 1137 aa10.79□□□□□ -0.68
CLDND1-229ENST00000513988 CNBD1Q8NA66 436 aa10.79□□□□□ -0.68
CLDND1-229ENST00000513988 ZC3H15Q8WU90 426 aaKnown RBP10.79□□□□□ -0.68
CLDND1-229ENST00000513988 GBA2Q9HCG7 927 aaPredicted RBP10.79□□□□□ -0.68
CLDND1-229ENST00000513988 GPRC5DQ9NZD1 345 aa10.79□□□□□ -0.68
CLDND1-229ENST00000513988 PGAP2Q9UHJ9 254 aa10.79□□□□□ -0.68
CLDND1-229ENST00000513988 NCAPD2Q15021 1401 aa10.78□□□□□ -0.68
CLDND1-229ENST00000513988 GPR25O00155 361 aa10.78□□□□□ -0.68
CLDND1-229ENST00000513988 HSP90AB1P08238 724 aaKnown RBP10.78□□□□□ -0.68
CLDND1-229ENST00000513988 TBC1D9BQ66K14 1250 aa10.78□□□□□ -0.68
CLDND1-229ENST00000513988 DNAJC10Q8IXB1 793 aa10.78□□□□□ -0.68
CLDND1-229ENST00000513988 TSPYL2Q9H2G4 693 aaPredicted RBP10.78□□□□□ -0.68
CLDND1-229ENST00000513988 TONSLQ96HA7 1378 aa10.77□□□□□ -0.68
CLDND1-229ENST00000513988 USP48Q86UV5 1035 aa10.77□□□□□ -0.69
CLDND1-229ENST00000513988 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLDND1-229ENST00000513988 VCANP13611 3396 aa10.77□□□□□ -0.69
CLDND1-229ENST00000513988 FKTNO75072 461 aa10.76□□□□□ -0.69
CLDND1-229ENST00000513988 NPR1P16066 1061 aa10.76□□□□□ -0.69
CLDND1-229ENST00000513988 PLA2G5P39877 138 aa10.76□□□□□ -0.69
CLDND1-229ENST00000513988 NOM1Q5C9Z4 860 aaKnown RBP10.76□□□□□ -0.69
CLDND1-229ENST00000513988 ANKRD13DQ6ZTN6 518 aa10.76□□□□□ -0.69
CLDND1-229ENST00000513988 PSMD1Q99460 953 aa10.76□□□□□ -0.69
CLDND1-229ENST00000513988 ZBTB1Q9Y2K1 713 aa10.76□□□□□ -0.69
CLDND1-229ENST00000513988 STXBP5LQ9Y2K9 1186 aa10.76□□□□□ -0.69
CLDND1-229ENST00000513988 KIF24Q5T7B8 1368 aa10.76□□□□□ -0.69
CLDND1-229ENST00000513988 COL4A5P29400 1685 aa10.76□□□□□ -0.69
CLDND1-229ENST00000513988 CYP19A1P11511 503 aaPredicted RBP10.75□□□□□ -0.69
CLDND1-229ENST00000513988 LARGE2Q8N3Y3 721 aa10.75□□□□□ -0.69
CLDND1-229ENST00000513988 FAM122AQ96E09 287 aa10.75□□□□□ -0.69
CLDND1-229ENST00000513988 LRCH3Q96II8 777 aa10.75□□□□□ -0.69
CLDND1-229ENST00000513988 TMEM106CQ9BVX2 250 aa10.75□□□□□ -0.69
CLDND1-229ENST00000513988 WASHC2AQ641Q2 1341 aa10.75□□□□□ -0.69
CLDND1-229ENST00000513988 LAMA3Q16787 3333 aa10.74□□□□□ -0.69
CLDND1-229ENST00000513988 SOX1O00570 391 aaPredicted RBP10.74□□□□□ -0.69
CLDND1-229ENST00000513988 DLK2Q6UY11 383 aa10.74□□□□□ -0.69
CLDND1-229ENST00000513988 DCBLD2Q96PD2 775 aa10.74□□□□□ -0.69
CLDND1-229ENST00000513988 TRIM17Q9Y577 477 aa10.74□□□□□ -0.69
CLDND1-229ENST00000513988 GMPSP49915 693 aaPredicted RBP10.73□□□□□ -0.69
CLDND1-229ENST00000513988 HIRAP54198 1017 aaPredicted RBP10.73□□□□□ -0.69
CLDND1-229ENST00000513988 NIM1KQ8IY84 436 aa10.73□□□□□ -0.69
CLDND1-229ENST00000513988 SETDB2Q96T68 719 aa10.73□□□□□ -0.69
CLDND1-229ENST00000513988 TTC28Q96AY4 2481 aa10.73□□□□□ -0.69
CLDND1-229ENST00000513988 ANKRD26Q9UPS8 1709 aa10.72□□□□□ -0.69
CLDND1-229ENST00000513988 A0A087WZG4 1122 aa10.72□□□□□ -0.69
CLDND1-229ENST00000513988 CANXP27824 592 aaKnown RBP10.72□□□□□ -0.69
CLDND1-229ENST00000513988 KRT26Q7Z3Y9 468 aa10.72□□□□□ -0.69
CLDND1-229ENST00000513988 RASAL3Q86YV0 1011 aa10.72□□□□□ -0.69
CLDND1-229ENST00000513988 PLCD3Q8N3E9 789 aa10.72□□□□□ -0.69
CLDND1-229ENST00000513988 DEFB123Q8N688 67 aa10.72□□□□□ -0.69
CLDND1-229ENST00000513988 NFATC2IPQ8NCF5 419 aa10.72□□□□□ -0.69
CLDND1-229ENST00000513988 TRPM4Q8TD43 1214 aa10.72□□□□□ -0.69
CLDND1-229ENST00000513988 EYA1Q99502 592 aa10.72□□□□□ -0.69
CLDND1-229ENST00000513988 PRO3102Q9H379 93 aa10.72□□□□□ -0.69
CLDND1-229ENST00000513988 ERBB4Q15303 1308 aa10.72□□□□□ -0.69
CLDND1-229ENST00000513988 A0A1W2PPC1 479 aa10.71□□□□□ -0.69
CLDND1-229ENST00000513988 CLCN6P51797 869 aa10.71□□□□□ -0.69
CLDND1-229ENST00000513988 DPF3Q92784 378 aa10.71□□□□□ -0.69
CLDND1-229ENST00000513988 ARMC5Q96C12 935 aa10.71□□□□□ -0.69
CLDND1-229ENST00000513988 GGNBP2Q9H3C7 697 aa10.71□□□□□ -0.69
CLDND1-229ENST00000513988 RAPGEFL1Q9UHV5 662 aa10.71□□□□□ -0.69
CLDND1-229ENST00000513988 SPTBN5Q9NRC6 3674 aaKnown RBP10.71□□□□□ -0.7
CLDND1-229ENST00000513988 NPC1L1Q9UHC9 1359 aa10.7□□□□□ -0.7
CLDND1-229ENST00000513988 CDHR2Q9BYE9 1310 aa10.7□□□□□ -0.7
CLDND1-229ENST00000513988 ST20-MTHFSA0A0A6YYL1 179 aa10.7□□□□□ -0.7
CLDND1-229ENST00000513988 ALDH1B1P30837 517 aa10.7□□□□□ -0.7
CLDND1-229ENST00000513988 MTHFSP49914 203 aa10.7□□□□□ -0.7
CLDND1-229ENST00000513988 OTOP1Q7RTM1 612 aa10.7□□□□□ -0.7
CLDND1-229ENST00000513988 RASEFQ8IZ41 740 aa10.7□□□□□ -0.7
CLDND1-229ENST00000513988 BCL2L13Q9BXK5 485 aa10.7□□□□□ -0.7
CLDND1-229ENST00000513988 CACNA1AO00555 2505 aa10.7□□□□□ -0.7
CLDND1-229ENST00000513988 SCN7AQ01118 1682 aa10.69□□□□□ -0.7
CLDND1-229ENST00000513988 PPM1GO15355 546 aaPredicted RBP10.69□□□□□ -0.7
CLDND1-229ENST00000513988 LHX8Q68G74 356 aa10.69□□□□□ -0.7
CLDND1-229ENST00000513988 CC2D2BQ6DHV5 1058 aa10.69□□□□□ -0.7
CLDND1-229ENST00000513988 ZNF530Q6P9A1 599 aaPredicted RBP10.69□□□□□ -0.7
CLDND1-229ENST00000513988 MS4A3Q96HJ5 214 aa10.69□□□□□ -0.7
CLDND1-229ENST00000513988 SNED1Q8TER0 1413 aa10.68□□□□□ -0.7
CLDND1-229ENST00000513988 EIF5P55010 431 aaKnown RBP10.68□□□□□ -0.7
CLDND1-229ENST00000513988 CXCL9Q07325 125 aa10.68□□□□□ -0.7
CLDND1-229ENST00000513988 SLC4A8Q2Y0W8 1093 aa10.68□□□□□ -0.7
CLDND1-229ENST00000513988 GPR153Q6NV75 609 aa10.68□□□□□ -0.7
CLDND1-229ENST00000513988 PTPN22Q9Y2R2 807 aa10.68□□□□□ -0.7
CLDND1-229ENST00000513988 EMILIN1Q9Y6C2 1016 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 393.5 ms