RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 IARSP41252 1262 aaKnown RBP19.25■□□□□ 0.67
CCHCR1-229ENST00000512418 NEUROD2Q15784 382 aa19.25■□□□□ 0.67
CCHCR1-229ENST00000512418 PROSER3Q2NL68 480 aa19.25■□□□□ 0.67
CCHCR1-229ENST00000512418 PSMD1Q99460 953 aa19.25■□□□□ 0.67
CCHCR1-229ENST00000512418 ANXA1P04083 346 aa19.24■□□□□ 0.67
CCHCR1-229ENST00000512418 CHADLQ6NUI6 762 aa19.24■□□□□ 0.67
CCHCR1-229ENST00000512418 PCNTO95613 3336 aa19.24■□□□□ 0.67
CCHCR1-229ENST00000512418 ZNF541Q9H0D2 1346 aa19.24■□□□□ 0.67
CCHCR1-229ENST00000512418 CHL1O00533 1208 aa19.23■□□□□ 0.67
CCHCR1-229ENST00000512418 GRIPAP1Q4V328 841 aa19.23■□□□□ 0.67
CCHCR1-229ENST00000512418 SYNE4Q8N205 404 aa19.23■□□□□ 0.67
CCHCR1-229ENST00000512418 RBM17Q96I25 401 aaKnown RBP19.23■□□□□ 0.67
CCHCR1-229ENST00000512418 TRIM35Q9UPQ4 493 aa19.23■□□□□ 0.67
CCHCR1-229ENST00000512418 RNF123Q5XPI4 1314 aa19.23■□□□□ 0.67
CCHCR1-229ENST00000512418 ANKRD36CQ5JPF3 1778 aa19.22■□□□□ 0.67
CCHCR1-229ENST00000512418 FZD9O00144 591 aa19.22■□□□□ 0.67
CCHCR1-229ENST00000512418 POTEIP0CG38 1075 aa19.22■□□□□ 0.67
CCHCR1-229ENST00000512418 POTEJP0CG39 1038 aa19.22■□□□□ 0.67
CCHCR1-229ENST00000512418 CRAMP1Q96RY5 1269 aa19.22■□□□□ 0.67
CCHCR1-229ENST00000512418 UTP14AQ9BVJ6 771 aaKnown RBP19.22■□□□□ 0.67
CCHCR1-229ENST00000512418 TAF1DQ9H5J8 278 aaPredicted RBP19.22■□□□□ 0.67
CCHCR1-229ENST00000512418 HSP90AB3PQ58FF7 597 aa19.21■□□□□ 0.67
CCHCR1-229ENST00000512418 COPS6Q7L5N1 327 aa19.21■□□□□ 0.67
CCHCR1-229ENST00000512418 XAGE3Q8WTP9 111 aa19.21■□□□□ 0.67
CCHCR1-229ENST00000512418 NECTIN2Q92692 538 aa19.21■□□□□ 0.67
CCHCR1-229ENST00000512418 NLRP3Q96P20 1036 aa19.21■□□□□ 0.67
CCHCR1-229ENST00000512418 DDX21Q9NR30 783 aaKnown RBP eCLIP19.21■□□□□ 0.67
CCHCR1-229ENST00000512418 ADAMTS8Q9UP79 889 aa19.21■□□□□ 0.67
CCHCR1-229ENST00000512418 LAS1LQ9Y4W2 734 aaKnown RBP19.21■□□□□ 0.67
CCHCR1-229ENST00000512418 PPEF1O14829 653 aaPredicted RBP19.2■□□□□ 0.66
CCHCR1-229ENST00000512418 KRT24Q2M2I5 525 aa19.2■□□□□ 0.66
CCHCR1-229ENST00000512418 SLC10A5Q5PT55 438 aa19.2■□□□□ 0.66
CCHCR1-229ENST00000512418 C3orf67Q6ZVT6 689 aa19.2■□□□□ 0.66
CCHCR1-229ENST00000512418 LDHDQ86WU2 507 aa19.2■□□□□ 0.66
CCHCR1-229ENST00000512418 JDP2Q8WYK2 163 aa19.2■□□□□ 0.66
CCHCR1-229ENST00000512418 HOXB7P09629 217 aa19.19■□□□□ 0.66
CCHCR1-229ENST00000512418 AIMP1Q12904 312 aaKnown RBP19.19■□□□□ 0.66
CCHCR1-229ENST00000512418 PRKRIP1Q9H875 184 aaPredicted RBP19.19■□□□□ 0.66
CCHCR1-229ENST00000512418 HACL1Q9UJ83 578 aa19.19■□□□□ 0.66
CCHCR1-229ENST00000512418 HDGFL1Q5TGJ6 251 aa19.18■□□□□ 0.66
CCHCR1-229ENST00000512418 GPC2Q8N158 579 aa19.18■□□□□ 0.66
CCHCR1-229ENST00000512418 CREBZFQ9NS37 354 aa19.18■□□□□ 0.66
CCHCR1-229ENST00000512418 TCIRG1Q13488 830 aa19.17■□□□□ 0.66
CCHCR1-229ENST00000512418 NLRP10Q86W26 655 aa19.17■□□□□ 0.66
CCHCR1-229ENST00000512418 CHPF2Q9P2E5 772 aa19.17■□□□□ 0.66
CCHCR1-229ENST00000512418 COL4A5P29400 1685 aa19.17■□□□□ 0.66
CCHCR1-229ENST00000512418 EPHX2P34913 555 aa19.16■□□□□ 0.66
CCHCR1-229ENST00000512418 EIF6P56537 245 aaKnown RBP19.16■□□□□ 0.66
CCHCR1-229ENST00000512418 EAPPQ56P03 285 aaPredicted RBP19.16■□□□□ 0.66
CCHCR1-229ENST00000512418 CFAP44Q96MT7 982 aa19.16■□□□□ 0.66
CCHCR1-229ENST00000512418 TMX4Q9H1E5 349 aaPredicted RBP19.16■□□□□ 0.66
CCHCR1-229ENST00000512418 ABCC4O15439 1325 aa19.16■□□□□ 0.66
CCHCR1-229ENST00000512418 ADAMTSL1Q8N6G6 1762 aa19.16■□□□□ 0.66
CCHCR1-229ENST00000512418 LAMB2P55268 1798 aa19.15■□□□□ 0.66
CCHCR1-229ENST00000512418 TCERG1O14776 1098 aaKnown RBP19.15■□□□□ 0.66
CCHCR1-229ENST00000512418 PNMA8AQ86V59 439 aaPredicted RBP19.15■□□□□ 0.66
CCHCR1-229ENST00000512418 LARGE2Q8N3Y3 721 aa19.15■□□□□ 0.66
CCHCR1-229ENST00000512418 DBF4Q9UBU7 674 aaPredicted RBP19.15■□□□□ 0.66
CCHCR1-229ENST00000512418 TRMT112Q9UI30 125 aaKnown RBP19.15■□□□□ 0.66
CCHCR1-229ENST00000512418 ATP6V0A2Q9Y487 856 aa19.15■□□□□ 0.66
CCHCR1-229ENST00000512418 SH3TC1Q8TE82 1336 aa19.15■□□□□ 0.66
CCHCR1-229ENST00000512418 SLC51AQ86UW1 340 aa19.14■□□□□ 0.65
CCHCR1-229ENST00000512418 PASKQ96RG2 1323 aa19.14■□□□□ 0.65
CCHCR1-229ENST00000512418 HCLS1P14317 486 aaPredicted RBP19.13■□□□□ 0.65
CCHCR1-229ENST00000512418 PLBD2Q8NHP8 589 aa19.13■□□□□ 0.65
CCHCR1-229ENST00000512418 PPIP5K2O43314 1243 aa19.12■□□□□ 0.65
CCHCR1-229ENST00000512418 BBOX1O75936 387 aa19.12■□□□□ 0.65
CCHCR1-229ENST00000512418 DUSP27Q5VZP5 1158 aa19.12■□□□□ 0.65
CCHCR1-229ENST00000512418 NIM1KQ8IY84 436 aa19.12■□□□□ 0.65
CCHCR1-229ENST00000512418 VPS33BQ9H267 617 aa19.12■□□□□ 0.65
CCHCR1-229ENST00000512418 MBIPQ9NS73 344 aa19.12■□□□□ 0.65
CCHCR1-229ENST00000512418 GJA3Q9Y6H8 435 aa19.12■□□□□ 0.65
CCHCR1-229ENST00000512418 ITGBL1O95965 494 aaPredicted RBP19.11■□□□□ 0.65
CCHCR1-229ENST00000512418 LMOD1P29536 600 aaPredicted RBP19.11■□□□□ 0.65
CCHCR1-229ENST00000512418 CALD1Q05682 793 aaKnown RBP19.11■□□□□ 0.65
CCHCR1-229ENST00000512418 ANKRD13DQ6ZTN6 518 aa19.11■□□□□ 0.65
CCHCR1-229ENST00000512418 DDX46Q7L014 1031 aaKnown RBP19.11■□□□□ 0.65
CCHCR1-229ENST00000512418 SUPT20HQ8NEM7 779 aa19.11■□□□□ 0.65
CCHCR1-229ENST00000512418 HYPKQ9NX55 129 aa19.11■□□□□ 0.65
CCHCR1-229ENST00000512418 CLEC11AQ9Y240 323 aa19.11■□□□□ 0.65
CCHCR1-229ENST00000512418 APAF1O14727 1248 aa19.1■□□□□ 0.65
CCHCR1-229ENST00000512418 ZNF853P0CG23 659 aa19.1■□□□□ 0.65
CCHCR1-229ENST00000512418 HSPA1AP0DMV8 641 aaKnown RBP19.1■□□□□ 0.65
CCHCR1-229ENST00000512418 HSPA1BP0DMV9 641 aaKnown RBP19.1■□□□□ 0.65
CCHCR1-229ENST00000512418 AOC3Q16853 763 aa19.1■□□□□ 0.65
CCHCR1-229ENST00000512418 RTFDC1Q9BY42 306 aaPredicted RBP19.1■□□□□ 0.65
CCHCR1-229ENST00000512418 IFT57Q9NWB7 429 aa19.1■□□□□ 0.65
CCHCR1-229ENST00000512418 MKRN1Q9UHC7 482 aaKnown RBP19.1■□□□□ 0.65
CCHCR1-229ENST00000512418 LTBP1Q14766 1721 aa19.1■□□□□ 0.65
CCHCR1-229ENST00000512418 SCNN1DP51172 638 aa19.09■□□□□ 0.65
CCHCR1-229ENST00000512418 GRAPQ13588 217 aa19.09■□□□□ 0.65
CCHCR1-229ENST00000512418 DPP8Q6V1X1 898 aaPredicted RBP19.09■□□□□ 0.65
CCHCR1-229ENST00000512418 SP8Q8IXZ3 490 aa19.09■□□□□ 0.65
CCHCR1-229ENST00000512418 GRAPLQ8TC17 118 aaPredicted RBP19.09■□□□□ 0.65
CCHCR1-229ENST00000512418 ISCA1Q9BUE6 129 aa19.09■□□□□ 0.65
CCHCR1-229ENST00000512418 DDX60Q8IY21 1712 aaKnown RBP19.08■□□□□ 0.65
CCHCR1-229ENST00000512418 CNTNAP1P78357 1384 aa19.08■□□□□ 0.65
CCHCR1-229ENST00000512418 TMEM88BA6NKF7 163 aa19.08■□□□□ 0.64
CCHCR1-229ENST00000512418 GNAI1P63096 354 aa19.08■□□□□ 0.64
CCHCR1-229ENST00000512418 COL13A1Q5TAT6 717 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms