RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 RAPGEF3O95398 923 aa12.02□□□□□ -0.49
LINC01088-207ENST00000511241 ABL1P00519 1130 aa12.02□□□□□ -0.49
LINC01088-207ENST00000511241 SF3B2Q13435 895 aaKnown RBP12.02□□□□□ -0.49
LINC01088-207ENST00000511241 HELQQ8TDG4 1101 aa12.02□□□□□ -0.49
LINC01088-207ENST00000511241 NGLY1Q96IV0 654 aa12.02□□□□□ -0.49
LINC01088-207ENST00000511241 QTRT2Q9H974 415 aaKnown RBP12.02□□□□□ -0.49
LINC01088-207ENST00000511241 DYRK1BQ9Y463 629 aa12.02□□□□□ -0.49
LINC01088-207ENST00000511241 TXLNAP40222 546 aa12.01□□□□□ -0.49
LINC01088-207ENST00000511241 COX20Q5RI15 118 aa12.01□□□□□ -0.49
LINC01088-207ENST00000511241 FKBP4Q02790 459 aaKnown RBP eCLIP12□□□□□ -0.49
LINC01088-207ENST00000511241 HIF1AQ16665 826 aa12□□□□□ -0.49
LINC01088-207ENST00000511241 GMPR2Q9P2T1 348 aaKnown RBP12□□□□□ -0.49
LINC01088-207ENST00000511241 DNMT3AQ9Y6K1 912 aaPredicted RBP12□□□□□ -0.49
LINC01088-207ENST00000511241 ABCA9Q8IUA7 1624 aa12□□□□□ -0.49
LINC01088-207ENST00000511241 SOWAHDA6NJG2 315 aa11.99□□□□□ -0.49
LINC01088-207ENST00000511241 ICMTO60725 284 aa11.99□□□□□ -0.49
LINC01088-207ENST00000511241 SAP130Q9H0E3 1048 aa11.99□□□□□ -0.49
LINC01088-207ENST00000511241 CDK13Q14004 1512 aaKnown RBP11.98□□□□□ -0.49
LINC01088-207ENST00000511241 ARAP3Q8WWN8 1544 aa11.98□□□□□ -0.49
LINC01088-207ENST00000511241 MSX1P28360 303 aa11.98□□□□□ -0.49
LINC01088-207ENST00000511241 C11orf91Q3C1V1 193 aa11.98□□□□□ -0.49
LINC01088-207ENST00000511241 SND1Q7KZF4 910 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC01088-207ENST00000511241 RHPN1Q8TCX5 695 aa11.98□□□□□ -0.49
LINC01088-207ENST00000511241 C7orf43Q8WVR3 580 aa11.98□□□□□ -0.49
LINC01088-207ENST00000511241 F11P03951 625 aa11.97□□□□□ -0.49
LINC01088-207ENST00000511241 LRFN2Q9ULH4 789 aa11.97□□□□□ -0.49
LINC01088-207ENST00000511241 EFCAB5A4FU69 1503 aa11.96□□□□□ -0.49
LINC01088-207ENST00000511241 PLEKHD1A6NEE1 506 aa11.96□□□□□ -0.49
LINC01088-207ENST00000511241 NPR3P17342 541 aa11.96□□□□□ -0.49
LINC01088-207ENST00000511241 ATP4AP20648 1035 aa11.96□□□□□ -0.49
LINC01088-207ENST00000511241 BRD2P25440 801 aaKnown RBP11.96□□□□□ -0.49
LINC01088-207ENST00000511241 ZNF211Q13398 564 aaPredicted RBP11.96□□□□□ -0.49
LINC01088-207ENST00000511241 GLYCTKQ8IVS8 523 aa11.96□□□□□ -0.49
LINC01088-207ENST00000511241 STIM2Q9P246 746 aa11.96□□□□□ -0.49
LINC01088-207ENST00000511241 ANKIB1Q9P2G1 1089 aa11.96□□□□□ -0.49
LINC01088-207ENST00000511241 ARHGAP35Q9NRY4 1499 aa11.95□□□□□ -0.5
LINC01088-207ENST00000511241 SENP3-EIF4A1A0A087X0R7 540 aa11.95□□□□□ -0.5
LINC01088-207ENST00000511241 SOBPA7XYQ1 873 aa11.95□□□□□ -0.5
LINC01088-207ENST00000511241 FAM13AO94988 1023 aa11.95□□□□□ -0.5
LINC01088-207ENST00000511241 PTSQ03393 145 aa11.95□□□□□ -0.5
LINC01088-207ENST00000511241 BICDL1Q6ZP65 573 aa11.95□□□□□ -0.5
LINC01088-207ENST00000511241 FRMPD1Q5SYB0 1578 aa11.94□□□□□ -0.5
LINC01088-207ENST00000511241 SLC35F4A4IF30 521 aa11.94□□□□□ -0.5
LINC01088-207ENST00000511241 C11orf95C9JLR9 678 aaPredicted RBP11.94□□□□□ -0.5
LINC01088-207ENST00000511241 H3BRB1 525 aa11.94□□□□□ -0.5
LINC01088-207ENST00000511241 LCE2BO14633 110 aa11.94□□□□□ -0.5
LINC01088-207ENST00000511241 DGKZQ13574 1117 aa11.94□□□□□ -0.5
LINC01088-207ENST00000511241 ABTB2Q8N961 1025 aa11.94□□□□□ -0.5
LINC01088-207ENST00000511241 ZIC5Q96T25 663 aa11.94□□□□□ -0.5
LINC01088-207ENST00000511241 CRISPLD1Q9H336 500 aa11.94□□□□□ -0.5
LINC01088-207ENST00000511241 TUT1Q9H6E5 874 aaKnown RBP11.94□□□□□ -0.5
LINC01088-207ENST00000511241 ANO2Q9NQ90 1003 aa11.94□□□□□ -0.5
LINC01088-207ENST00000511241 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC01088-207ENST00000511241 TNFRSF10BO14763 440 aa11.93□□□□□ -0.5
LINC01088-207ENST00000511241 ARSJQ5FYB0 599 aaPredicted RBP11.93□□□□□ -0.5
LINC01088-207ENST00000511241 TMCO4Q5TGY1 634 aa11.93□□□□□ -0.5
LINC01088-207ENST00000511241 PGBD3Q8N328 593 aa11.93□□□□□ -0.5
LINC01088-207ENST00000511241 GAS2L1Q99501 681 aaPredicted RBP11.93□□□□□ -0.5
LINC01088-207ENST00000511241 NEUROD4Q9HD90 331 aa11.93□□□□□ -0.5
LINC01088-207ENST00000511241 NEO1Q92859 1461 aa11.93□□□□□ -0.5
LINC01088-207ENST00000511241 TTC37Q6PGP7 1564 aa11.92□□□□□ -0.5
LINC01088-207ENST00000511241 LBRQ14739 615 aaKnown RBP11.92□□□□□ -0.5
LINC01088-207ENST00000511241 ALKBH2Q6NS38 261 aa11.92□□□□□ -0.5
LINC01088-207ENST00000511241 IFT43Q96FT9 208 aa11.92□□□□□ -0.5
LINC01088-207ENST00000511241 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
LINC01088-207ENST00000511241 KLK14Q9P0G3 267 aa11.92□□□□□ -0.5
LINC01088-207ENST00000511241 SNRPBP14678 240 aaKnown RBP11.91□□□□□ -0.5
LINC01088-207ENST00000511241 MTMR3Q13615 1198 aa11.91□□□□□ -0.5
LINC01088-207ENST00000511241 IER5Q5VY09 327 aa11.91□□□□□ -0.5
LINC01088-207ENST00000511241 SUSD3Q96L08 255 aa11.91□□□□□ -0.5
LINC01088-207ENST00000511241 GPAMQ9HCL2 828 aa11.91□□□□□ -0.5
LINC01088-207ENST00000511241 AKNAQ7Z591 1439 aa11.91□□□□□ -0.5
LINC01088-207ENST00000511241 PHLDB1Q86UU1 1377 aa11.91□□□□□ -0.5
LINC01088-207ENST00000511241 A0A1W2PNR3 127 aa11.9□□□□□ -0.5
LINC01088-207ENST00000511241 NLRP8Q86W28 1048 aa11.9□□□□□ -0.5
LINC01088-207ENST00000511241 HECW2Q9P2P5 1572 aa11.9□□□□□ -0.5
LINC01088-207ENST00000511241 BIN2Q9UBW5 565 aaPredicted RBP11.9□□□□□ -0.5
LINC01088-207ENST00000511241 TGFBR3LH3BV60 316 aa11.89□□□□□ -0.51
LINC01088-207ENST00000511241 H7C1W4 665 aa11.89□□□□□ -0.51
LINC01088-207ENST00000511241 NOM1Q5C9Z4 860 aaKnown RBP11.89□□□□□ -0.51
LINC01088-207ENST00000511241 EFHC2Q5JST6 749 aa11.89□□□□□ -0.51
LINC01088-207ENST00000511241 CCDC155Q8N6L0 562 aa11.89□□□□□ -0.51
LINC01088-207ENST00000511241 GMCL1Q96IK5 515 aa11.89□□□□□ -0.51
LINC01088-207ENST00000511241 GJA3Q9Y6H8 435 aa11.89□□□□□ -0.51
LINC01088-207ENST00000511241 FANCAO15360 1455 aa11.89□□□□□ -0.51
LINC01088-207ENST00000511241 DENND4BO75064 1496 aaPredicted RBP11.89□□□□□ -0.51
LINC01088-207ENST00000511241 MPSTP25325 297 aa11.88□□□□□ -0.51
LINC01088-207ENST00000511241 ECM1Q16610 540 aa11.88□□□□□ -0.51
LINC01088-207ENST00000511241 RUBCNLQ9H714 662 aa11.88□□□□□ -0.51
LINC01088-207ENST00000511241 ARID4BQ4LE39 1312 aaPredicted RBP11.87□□□□□ -0.51
LINC01088-207ENST00000511241 RIPOR1Q6ZS17 1223 aa11.87□□□□□ -0.51
LINC01088-207ENST00000511241 BCS1LQ9Y276 419 aa11.87□□□□□ -0.51
LINC01088-207ENST00000511241 FMN1Q68DA7 1419 aa11.86□□□□□ -0.51
LINC01088-207ENST00000511241 YEATS2Q9ULM3 1422 aa11.86□□□□□ -0.51
LINC01088-207ENST00000511241 ARHGAP4P98171 946 aa11.86□□□□□ -0.51
LINC01088-207ENST00000511241 CCDC27Q2M243 656 aa11.86□□□□□ -0.51
LINC01088-207ENST00000511241 LRRC69Q6ZNQ3 347 aa11.86□□□□□ -0.51
LINC01088-207ENST00000511241 FAM13BQ9NYF5 915 aa11.86□□□□□ -0.51
LINC01088-207ENST00000511241 CCDC9Q9Y3X0 531 aaKnown RBP11.86□□□□□ -0.51
LINC01088-207ENST00000511241 MICAL2O94851 1124 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms