RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 UBN2Q6ZU65 1347 aa11.35□□□□□ -0.59
PDGFC-206ENST00000510982 MYBBP1AQ9BQG0 1328 aaKnown RBP11.35□□□□□ -0.59
PDGFC-206ENST00000510982 ABCC12Q96J65 1359 aa11.34□□□□□ -0.59
PDGFC-206ENST00000510982 WDR43Q15061 677 aaKnown RBP eCLIP11.34□□□□□ -0.59
PDGFC-206ENST00000510982 PROSER3Q2NL68 480 aa11.34□□□□□ -0.59
PDGFC-206ENST00000510982 COPS6Q7L5N1 327 aa11.34□□□□□ -0.59
PDGFC-206ENST00000510982 RUNDC1Q96C34 613 aa11.34□□□□□ -0.59
PDGFC-206ENST00000510982 L3MBTL3Q96JM7 780 aaPredicted RBP11.34□□□□□ -0.59
PDGFC-206ENST00000510982 CRAMP1Q96RY5 1269 aa11.34□□□□□ -0.59
PDGFC-206ENST00000510982 PSMD1Q99460 953 aa11.34□□□□□ -0.59
PDGFC-206ENST00000510982 UTP14AQ9BVJ6 771 aaKnown RBP11.34□□□□□ -0.59
PDGFC-206ENST00000510982 TAF1DQ9H5J8 278 aaPredicted RBP11.34□□□□□ -0.59
PDGFC-206ENST00000510982 NUP98P52948 1817 aa11.34□□□□□ -0.59
PDGFC-206ENST00000510982 KDM3BQ7LBC6 1761 aa11.33□□□□□ -0.59
PDGFC-206ENST00000510982 FZD9O00144 591 aa11.33□□□□□ -0.6
PDGFC-206ENST00000510982 CHL1O00533 1208 aa11.33□□□□□ -0.6
PDGFC-206ENST00000510982 NTSR2O95665 410 aa11.33□□□□□ -0.6
PDGFC-206ENST00000510982 GRIPAP1Q4V328 841 aa11.33□□□□□ -0.6
PDGFC-206ENST00000510982 EAPPQ56P03 285 aaPredicted RBP11.33□□□□□ -0.6
PDGFC-206ENST00000510982 SLC10A5Q5PT55 438 aa11.33□□□□□ -0.6
PDGFC-206ENST00000510982 LRP10Q7Z4F1 713 aa11.33□□□□□ -0.6
PDGFC-206ENST00000510982 LDHDQ86WU2 507 aa11.33□□□□□ -0.6
PDGFC-206ENST00000510982 XAGE3Q8WTP9 111 aa11.33□□□□□ -0.6
PDGFC-206ENST00000510982 TMX4Q9H1E5 349 aaPredicted RBP11.33□□□□□ -0.6
PDGFC-206ENST00000510982 HACL1Q9UJ83 578 aa11.33□□□□□ -0.6
PDGFC-206ENST00000510982 ADAMTS8Q9UP79 889 aa11.33□□□□□ -0.6
PDGFC-206ENST00000510982 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.6
PDGFC-206ENST00000510982 ZNF541Q9H0D2 1346 aa11.33□□□□□ -0.6
PDGFC-206ENST00000510982 LAMB4A4D0S4 1761 aa11.32□□□□□ -0.6
PDGFC-206ENST00000510982 EPHX2P34913 555 aa11.32□□□□□ -0.6
PDGFC-206ENST00000510982 EIF6P56537 245 aaKnown RBP11.32□□□□□ -0.6
PDGFC-206ENST00000510982 HSP90AB3PQ58FF7 597 aa11.32□□□□□ -0.6
PDGFC-206ENST00000510982 C3orf67Q6ZVT6 689 aa11.32□□□□□ -0.6
PDGFC-206ENST00000510982 TRIM35Q9UPQ4 493 aa11.32□□□□□ -0.6
PDGFC-206ENST00000510982 ARFGEF2Q9Y6D5 1785 aa11.31□□□□□ -0.6
PDGFC-206ENST00000510982 IBTKQ9P2D0 1353 aaPredicted RBP11.31□□□□□ -0.6
PDGFC-206ENST00000510982 PPEF1O14829 653 aaPredicted RBP11.31□□□□□ -0.6
PDGFC-206ENST00000510982 KRT24Q2M2I5 525 aa11.31□□□□□ -0.6
PDGFC-206ENST00000510982 PNMA8AQ86V59 439 aaPredicted RBP11.31□□□□□ -0.6
PDGFC-206ENST00000510982 GPC2Q8N158 579 aa11.31□□□□□ -0.6
PDGFC-206ENST00000510982 LARGE2Q8N3Y3 721 aa11.31□□□□□ -0.6
PDGFC-206ENST00000510982 DDX21Q9NR30 783 aaKnown RBP eCLIP11.31□□□□□ -0.6
PDGFC-206ENST00000510982 CREBZFQ9NS37 354 aa11.31□□□□□ -0.6
PDGFC-206ENST00000510982 GJA3Q9Y6H8 435 aa11.31□□□□□ -0.6
PDGFC-206ENST00000510982 HCLS1P14317 486 aaPredicted RBP11.3□□□□□ -0.6
PDGFC-206ENST00000510982 TCIRG1Q13488 830 aa11.3□□□□□ -0.6
PDGFC-206ENST00000510982 COL13A1Q5TAT6 717 aaPredicted RBP11.3□□□□□ -0.6
PDGFC-206ENST00000510982 NLRP10Q86W26 655 aa11.3□□□□□ -0.6
PDGFC-206ENST00000510982 MKRN1Q9UHC7 482 aaKnown RBP11.3□□□□□ -0.6
PDGFC-206ENST00000510982 TRMT112Q9UI30 125 aaKnown RBP11.3□□□□□ -0.6
PDGFC-206ENST00000510982 RNF123Q5XPI4 1314 aa11.3□□□□□ -0.6
PDGFC-206ENST00000510982 BBOX1O75936 387 aa11.29□□□□□ -0.6
PDGFC-206ENST00000510982 ITGBL1O95965 494 aaPredicted RBP11.29□□□□□ -0.6
PDGFC-206ENST00000510982 HDGFL1Q5TGJ6 251 aa11.29□□□□□ -0.6
PDGFC-206ENST00000510982 CNTROBQ8N137 903 aa11.29□□□□□ -0.6
PDGFC-206ENST00000510982 ZNF428Q96B54 188 aa11.29□□□□□ -0.6
PDGFC-206ENST00000510982 CHPF2Q9P2E5 772 aa11.29□□□□□ -0.6
PDGFC-206ENST00000510982 ATP6V0A2Q9Y487 856 aa11.29□□□□□ -0.6
PDGFC-206ENST00000510982 SCN4AP35499 1836 aa11.28□□□□□ -0.6
PDGFC-206ENST00000510982 RIC1Q4ADV7 1423 aa11.28□□□□□ -0.6
PDGFC-206ENST00000510982 TMEM88BA6NKF7 163 aa11.28□□□□□ -0.6
PDGFC-206ENST00000510982 PPIP5K2O43314 1243 aa11.28□□□□□ -0.6
PDGFC-206ENST00000510982 HSPA1AP0DMV8 641 aaKnown RBP11.28□□□□□ -0.6
PDGFC-206ENST00000510982 HSPA1BP0DMV9 641 aaKnown RBP11.28□□□□□ -0.6
PDGFC-206ENST00000510982 LMOD1P29536 600 aaPredicted RBP11.28□□□□□ -0.6
PDGFC-206ENST00000510982 MAP1SQ66K74 1059 aaPredicted RBP11.28□□□□□ -0.6
PDGFC-206ENST00000510982 ANKRD13DQ6ZTN6 518 aa11.28□□□□□ -0.6
PDGFC-206ENST00000510982 DDX46Q7L014 1031 aaKnown RBP11.28□□□□□ -0.6
PDGFC-206ENST00000510982 SLC51AQ86UW1 340 aa11.28□□□□□ -0.6
PDGFC-206ENST00000510982 SP8Q8IXZ3 490 aa11.28□□□□□ -0.6
PDGFC-206ENST00000510982 NIM1KQ8IY84 436 aa11.28□□□□□ -0.6
PDGFC-206ENST00000510982 CFAP44Q96MT7 982 aa11.28□□□□□ -0.6
PDGFC-206ENST00000510982 PRKRIP1Q9H875 184 aaPredicted RBP11.28□□□□□ -0.6
PDGFC-206ENST00000510982 DBF4Q9UBU7 674 aaPredicted RBP11.28□□□□□ -0.6
PDGFC-206ENST00000510982 PASKQ96RG2 1323 aa11.28□□□□□ -0.6
PDGFC-206ENST00000510982 HOXB7P09629 217 aa11.27□□□□□ -0.61
PDGFC-206ENST00000510982 EPS15P42566 896 aa11.27□□□□□ -0.61
PDGFC-206ENST00000510982 AOC3Q16853 763 aa11.27□□□□□ -0.61
PDGFC-206ENST00000510982 DUSP27Q5VZP5 1158 aa11.27□□□□□ -0.61
PDGFC-206ENST00000510982 MPNDQ8N594 471 aa11.27□□□□□ -0.61
PDGFC-206ENST00000510982 SUPT20HQ8NEM7 779 aa11.27□□□□□ -0.61
PDGFC-206ENST00000510982 PLBD2Q8NHP8 589 aa11.27□□□□□ -0.61
PDGFC-206ENST00000510982 VPS33BQ9H267 617 aa11.27□□□□□ -0.61
PDGFC-206ENST00000510982 ABCC4O15439 1325 aa11.27□□□□□ -0.61
PDGFC-206ENST00000510982 SH3TC1Q8TE82 1336 aa11.27□□□□□ -0.61
PDGFC-206ENST00000510982 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
PDGFC-206ENST00000510982 APAF1O14727 1248 aa11.26□□□□□ -0.61
PDGFC-206ENST00000510982 DPP8Q6V1X1 898 aaPredicted RBP11.26□□□□□ -0.61
PDGFC-206ENST00000510982 MBIPQ9NS73 344 aa11.26□□□□□ -0.61
PDGFC-206ENST00000510982 HYPKQ9NX55 129 aa11.26□□□□□ -0.61
PDGFC-206ENST00000510982 ZNRF3Q9ULT6 936 aa11.26□□□□□ -0.61
PDGFC-206ENST00000510982 ATP5J2-PTCD1G3V325 749 aa11.25□□□□□ -0.61
PDGFC-206ENST00000510982 ELL2O00472 640 aaPredicted RBP11.25□□□□□ -0.61
PDGFC-206ENST00000510982 GRAPQ13588 217 aa11.25□□□□□ -0.61
PDGFC-206ENST00000510982 TNS4Q8IZW8 715 aa11.25□□□□□ -0.61
PDGFC-206ENST00000510982 GRAPLQ8TC17 118 aaPredicted RBP11.25□□□□□ -0.61
PDGFC-206ENST00000510982 FAM89AQ96GI7 184 aa11.25□□□□□ -0.61
PDGFC-206ENST00000510982 RTFDC1Q9BY42 306 aaPredicted RBP11.25□□□□□ -0.61
PDGFC-206ENST00000510982 VEGFBP49765 207 aa11.24□□□□□ -0.61
PDGFC-206ENST00000510982 SCNN1DP51172 638 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms