RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 TSPYL4Q9UJ04 414 aa19.53■□□□□ 0.72
SMAD5-206ENST00000509962 EIF2S2P20042 333 aaKnown RBP19.52■□□□□ 0.72
SMAD5-206ENST00000509962 EPHX2P34913 555 aa19.52■□□□□ 0.72
SMAD5-206ENST00000509962 GIGYF2Q6Y7W6 1299 aaKnown RBP19.52■□□□□ 0.72
SMAD5-206ENST00000509962 PNMA8AQ86V59 439 aaPredicted RBP19.52■□□□□ 0.72
SMAD5-206ENST00000509962 GPC2Q8N158 579 aa19.52■□□□□ 0.72
SMAD5-206ENST00000509962 ERBB4Q15303 1308 aa19.51■□□□□ 0.71
SMAD5-206ENST00000509962 EIF6P56537 245 aaKnown RBP19.51■□□□□ 0.71
SMAD5-206ENST00000509962 CRAMP1Q96RY5 1269 aa19.51■□□□□ 0.71
SMAD5-206ENST00000509962 TMX4Q9H1E5 349 aaPredicted RBP19.51■□□□□ 0.71
SMAD5-206ENST00000509962 ABCC12Q96J65 1359 aa19.51■□□□□ 0.71
SMAD5-206ENST00000509962 UBN2Q6ZU65 1347 aa19.51■□□□□ 0.71
SMAD5-206ENST00000509962 PASKQ96RG2 1323 aa19.51■□□□□ 0.71
SMAD5-206ENST00000509962 TMEM88BA6NKF7 163 aa19.5■□□□□ 0.71
SMAD5-206ENST00000509962 TCERG1O14776 1098 aaKnown RBP19.5■□□□□ 0.71
SMAD5-206ENST00000509962 ITGBL1O95965 494 aaPredicted RBP19.5■□□□□ 0.71
SMAD5-206ENST00000509962 NLRP3Q96P20 1036 aa19.5■□□□□ 0.71
SMAD5-206ENST00000509962 RNF123Q5XPI4 1314 aa19.5■□□□□ 0.71
SMAD5-206ENST00000509962 IBTKQ9P2D0 1353 aaPredicted RBP19.49■□□□□ 0.71
SMAD5-206ENST00000509962 CAPN15O75808 1086 aa19.49■□□□□ 0.71
SMAD5-206ENST00000509962 RALBP1Q15311 655 aa19.49■□□□□ 0.71
SMAD5-206ENST00000509962 PARP10Q53GL7 1025 aa19.49■□□□□ 0.71
SMAD5-206ENST00000509962 BABAM1Q9NWV8 329 aa19.49■□□□□ 0.71
SMAD5-206ENST00000509962 GJA3Q9Y6H8 435 aa19.49■□□□□ 0.71
SMAD5-206ENST00000509962 NTSR2O95665 410 aa19.48■□□□□ 0.71
SMAD5-206ENST00000509962 LARGE2Q8N3Y3 721 aa19.48■□□□□ 0.71
SMAD5-206ENST00000509962 PPEF1O14829 653 aaPredicted RBP19.47■□□□□ 0.71
SMAD5-206ENST00000509962 LMOD3Q0VAK6 560 aa19.47■□□□□ 0.71
SMAD5-206ENST00000509962 CNTROBQ8N137 903 aa19.47■□□□□ 0.71
SMAD5-206ENST00000509962 UTP14AQ9BVJ6 771 aaKnown RBP19.47■□□□□ 0.71
SMAD5-206ENST00000509962 RIC1Q4ADV7 1423 aa19.46■□□□□ 0.71
SMAD5-206ENST00000509962 LMOD1P29536 600 aaPredicted RBP19.46■□□□□ 0.71
SMAD5-206ENST00000509962 TMPOP42166 694 aaKnown RBP19.46■□□□□ 0.71
SMAD5-206ENST00000509962 PDIA6Q15084 440 aa19.46■□□□□ 0.71
SMAD5-206ENST00000509962 SLC10A5Q5PT55 438 aa19.46■□□□□ 0.71
SMAD5-206ENST00000509962 CNTNAP1P78357 1384 aa19.45■□□□□ 0.7
SMAD5-206ENST00000509962 MAP1SQ66K74 1059 aaPredicted RBP19.45■□□□□ 0.7
SMAD5-206ENST00000509962 SNED1Q8TER0 1413 aa19.44■□□□□ 0.7
SMAD5-206ENST00000509962 PCNTO95613 3336 aa19.44■□□□□ 0.7
SMAD5-206ENST00000509962 ANXA1P04083 346 aa19.44■□□□□ 0.7
SMAD5-206ENST00000509962 AIMP1Q12904 312 aaKnown RBP19.44■□□□□ 0.7
SMAD5-206ENST00000509962 NEUROD2Q15784 382 aa19.44■□□□□ 0.7
SMAD5-206ENST00000509962 HSP90AB3PQ58FF7 597 aa19.44■□□□□ 0.7
SMAD5-206ENST00000509962 C3orf67Q6ZVT6 689 aa19.44■□□□□ 0.7
SMAD5-206ENST00000509962 COPS6Q7L5N1 327 aa19.44■□□□□ 0.7
SMAD5-206ENST00000509962 LRP10Q7Z4F1 713 aa19.44■□□□□ 0.7
SMAD5-206ENST00000509962 NECTIN2Q92692 538 aa19.44■□□□□ 0.7
SMAD5-206ENST00000509962 VEGFBP49765 207 aa19.43■□□□□ 0.7
SMAD5-206ENST00000509962 PROSER3Q2NL68 480 aa19.43■□□□□ 0.7
SMAD5-206ENST00000509962 DEFB115Q30KQ5 88 aa19.43■□□□□ 0.7
SMAD5-206ENST00000509962 NIM1KQ8IY84 436 aa19.43■□□□□ 0.7
SMAD5-206ENST00000509962 PPIP5K2O43314 1243 aa19.42■□□□□ 0.7
SMAD5-206ENST00000509962 AIDAQ96BJ3 306 aa19.42■□□□□ 0.7
SMAD5-206ENST00000509962 VPS33BQ9H267 617 aa19.42■□□□□ 0.7
SMAD5-206ENST00000509962 ATP6V0A2Q9Y487 856 aa19.42■□□□□ 0.7
SMAD5-206ENST00000509962 BBOX1O75936 387 aa19.41■□□□□ 0.7
SMAD5-206ENST00000509962 EPS15P42566 896 aa19.41■□□□□ 0.7
SMAD5-206ENST00000509962 SUPT20HQ8NEM7 779 aa19.41■□□□□ 0.7
SMAD5-206ENST00000509962 XAGE3Q8WTP9 111 aa19.41■□□□□ 0.7
SMAD5-206ENST00000509962 LAS1LQ9Y4W2 734 aaKnown RBP19.41■□□□□ 0.7
SMAD5-206ENST00000509962 FOXN1O15353 648 aa19.4■□□□□ 0.7
SMAD5-206ENST00000509962 TRMT112Q9UI30 125 aaKnown RBP19.4■□□□□ 0.7
SMAD5-206ENST00000509962 HCLS1P14317 486 aaPredicted RBP19.39■□□□□ 0.69
SMAD5-206ENST00000509962 SCNN1DP51172 638 aa19.39■□□□□ 0.69
SMAD5-206ENST00000509962 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.69
SMAD5-206ENST00000509962 TCIRG1Q13488 830 aa19.39■□□□□ 0.69
SMAD5-206ENST00000509962 AOC3Q16853 763 aa19.39■□□□□ 0.69
SMAD5-206ENST00000509962 USP50Q70EL3 339 aaPredicted RBP19.39■□□□□ 0.69
SMAD5-206ENST00000509962 DDX46Q7L014 1031 aaKnown RBP19.39■□□□□ 0.69
SMAD5-206ENST00000509962 NLRP10Q86W26 655 aa19.39■□□□□ 0.69
SMAD5-206ENST00000509962 SP8Q8IXZ3 490 aa19.39■□□□□ 0.69
SMAD5-206ENST00000509962 CCDC146Q8IYE0 955 aa19.39■□□□□ 0.69
SMAD5-206ENST00000509962 DDX21Q9NR30 783 aaKnown RBP eCLIP19.39■□□□□ 0.69
SMAD5-206ENST00000509962 ABT1Q9ULW3 272 aaKnown RBP19.39■□□□□ 0.69
SMAD5-206ENST00000509962 ABCC4O15439 1325 aa19.39■□□□□ 0.69
SMAD5-206ENST00000509962 ADAMTSL1Q8N6G6 1762 aa19.39■□□□□ 0.69
SMAD5-206ENST00000509962 RASSF10A6NK89 507 aa19.38■□□□□ 0.69
SMAD5-206ENST00000509962 CHL1O00533 1208 aa19.38■□□□□ 0.69
SMAD5-206ENST00000509962 COL4A5P29400 1685 aa19.38■□□□□ 0.69
SMAD5-206ENST00000509962 DPP8Q6V1X1 898 aaPredicted RBP19.38■□□□□ 0.69
SMAD5-206ENST00000509962 SLC51AQ86UW1 340 aa19.38■□□□□ 0.69
SMAD5-206ENST00000509962 MPNDQ8N594 471 aa19.38■□□□□ 0.69
SMAD5-206ENST00000509962 ZNRF3Q9ULT6 936 aa19.38■□□□□ 0.69
SMAD5-206ENST00000509962 MYBBP1AQ9BQG0 1328 aaKnown RBP19.37■□□□□ 0.69
SMAD5-206ENST00000509962 CTCFP49711 727 aaPredicted RBP19.37■□□□□ 0.69
SMAD5-206ENST00000509962 WDR43Q15061 677 aaKnown RBP eCLIP19.37■□□□□ 0.69
SMAD5-206ENST00000509962 RUNDC1Q96C34 613 aa19.37■□□□□ 0.69
SMAD5-206ENST00000509962 RTFDC1Q9BY42 306 aaPredicted RBP19.37■□□□□ 0.69
SMAD5-206ENST00000509962 PRDM10Q9NQV6 1147 aa19.37■□□□□ 0.69
SMAD5-206ENST00000509962 SH3TC1Q8TE82 1336 aa19.36■□□□□ 0.69
SMAD5-206ENST00000509962 WBP1LQ9NX94 342 aa19.36■□□□□ 0.69
SMAD5-206ENST00000509962 WDR33Q9C0J8 1336 aaKnown RBP19.35■□□□□ 0.69
SMAD5-206ENST00000509962 CXCL9Q07325 125 aa19.35■□□□□ 0.69
SMAD5-206ENST00000509962 KRT24Q2M2I5 525 aa19.35■□□□□ 0.69
SMAD5-206ENST00000509962 ANKRD13DQ6ZTN6 518 aa19.35■□□□□ 0.69
SMAD5-206ENST00000509962 ADARB2Q9NS39 739 aaKnown RBP19.35■□□□□ 0.69
SMAD5-206ENST00000509962 TRIM35Q9UPQ4 493 aa19.35■□□□□ 0.69
SMAD5-206ENST00000509962 GRAPQ13588 217 aa19.34■□□□□ 0.69
SMAD5-206ENST00000509962 GRAPLQ8TC17 118 aaPredicted RBP19.34■□□□□ 0.69
SMAD5-206ENST00000509962 GPRC5DQ9NZD1 345 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms