RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 L3MBTL3Q96JM7 780 aaPredicted RBP23.55■■□□□ 1.36
SKP2-204ENST00000508514 RIC1Q4ADV7 1423 aa23.54■■□□□ 1.36
SKP2-204ENST00000508514 CHL1O00533 1208 aa23.54■■□□□ 1.36
SKP2-204ENST00000508514 NEUROD2Q15784 382 aa23.54■■□□□ 1.36
SKP2-204ENST00000508514 NECTIN2Q92692 538 aa23.53■■□□□ 1.36
SKP2-204ENST00000508514 ADAMTS8Q9UP79 889 aa23.53■■□□□ 1.36
SKP2-204ENST00000508514 FZD9O00144 591 aa23.52■■□□□ 1.36
SKP2-204ENST00000508514 IARSP41252 1262 aaKnown RBP23.52■■□□□ 1.36
SKP2-204ENST00000508514 CHADLQ6NUI6 762 aa23.52■■□□□ 1.36
SKP2-204ENST00000508514 COL4A5P29400 1685 aa23.51■■□□□ 1.35
SKP2-204ENST00000508514 LMOD3Q0VAK6 560 aa23.51■■□□□ 1.35
SKP2-204ENST00000508514 PSMD1Q99460 953 aa23.51■■□□□ 1.35
SKP2-204ENST00000508514 TAF1DQ9H5J8 278 aaPredicted RBP23.51■■□□□ 1.35
SKP2-204ENST00000508514 SLC10A5Q5PT55 438 aa23.5■■□□□ 1.35
SKP2-204ENST00000508514 COPS6Q7L5N1 327 aa23.5■■□□□ 1.35
SKP2-204ENST00000508514 RUNDC1Q96C34 613 aa23.5■■□□□ 1.35
SKP2-204ENST00000508514 CRAMP1Q96RY5 1269 aa23.5■■□□□ 1.35
SKP2-204ENST00000508514 XAGE3Q8WTP9 111 aa23.49■■□□□ 1.35
SKP2-204ENST00000508514 RPGRQ92834 1020 aaKnown RBP23.49■■□□□ 1.35
SKP2-204ENST00000508514 PARP10Q53GL7 1025 aa23.48■■□□□ 1.35
SKP2-204ENST00000508514 PPP1R42Q7Z4L9 355 aa23.48■■□□□ 1.35
SKP2-204ENST00000508514 AIMP1Q12904 312 aaKnown RBP23.47■■□□□ 1.35
SKP2-204ENST00000508514 RBM17Q96I25 401 aaKnown RBP23.47■■□□□ 1.35
SKP2-204ENST00000508514 UTP14AQ9BVJ6 771 aaKnown RBP23.47■■□□□ 1.35
SKP2-204ENST00000508514 IQCA1LA6NCM1 817 aa23.46■■□□□ 1.35
SKP2-204ENST00000508514 TCERG1O14776 1098 aaKnown RBP23.46■■□□□ 1.35
SKP2-204ENST00000508514 CC2D2BQ6DHV5 1058 aa23.46■■□□□ 1.35
SKP2-204ENST00000508514 NLRP10Q86W26 655 aa23.46■■□□□ 1.35
SKP2-204ENST00000508514 DDX21Q9NR30 783 aaKnown RBP eCLIP23.46■■□□□ 1.35
SKP2-204ENST00000508514 LAS1LQ9Y4W2 734 aaKnown RBP23.46■■□□□ 1.35
SKP2-204ENST00000508514 PASKQ96RG2 1323 aa23.45■■□□□ 1.34
SKP2-204ENST00000508514 LDHDQ86WU2 507 aa23.45■■□□□ 1.34
SKP2-204ENST00000508514 PRKRIP1Q9H875 184 aaPredicted RBP23.45■■□□□ 1.34
SKP2-204ENST00000508514 SCN4AP35499 1836 aa23.45■■□□□ 1.34
SKP2-204ENST00000508514 PPEF1O14829 653 aaPredicted RBP23.44■■□□□ 1.34
SKP2-204ENST00000508514 ITGBL1O95965 494 aaPredicted RBP23.44■■□□□ 1.34
SKP2-204ENST00000508514 TCIRG1Q13488 830 aa23.44■■□□□ 1.34
SKP2-204ENST00000508514 WDR43Q15061 677 aaKnown RBP eCLIP23.44■■□□□ 1.34
SKP2-204ENST00000508514 COL13A1Q5TAT6 717 aaPredicted RBP23.44■■□□□ 1.34
SKP2-204ENST00000508514 NLRP3Q96P20 1036 aa23.44■■□□□ 1.34
SKP2-204ENST00000508514 CHPF2Q9P2E5 772 aa23.44■■□□□ 1.34
SKP2-204ENST00000508514 RNF123Q5XPI4 1314 aa23.43■■□□□ 1.34
SKP2-204ENST00000508514 HCLS1P14317 486 aaPredicted RBP23.43■■□□□ 1.34
SKP2-204ENST00000508514 GPC2Q8N158 579 aa23.43■■□□□ 1.34
SKP2-204ENST00000508514 ZNF428Q96B54 188 aa23.43■■□□□ 1.34
SKP2-204ENST00000508514 HACL1Q9UJ83 578 aa23.43■■□□□ 1.34
SKP2-204ENST00000508514 EPHX2P34913 555 aa23.42■■□□□ 1.34
SKP2-204ENST00000508514 CREBZFQ9NS37 354 aa23.42■■□□□ 1.34
SKP2-204ENST00000508514 ABCC4O15439 1325 aa23.41■■□□□ 1.34
SKP2-204ENST00000508514 JDP2Q8WYK2 163 aa23.41■■□□□ 1.34
SKP2-204ENST00000508514 ATP6V0A2Q9Y487 856 aa23.41■■□□□ 1.34
SKP2-204ENST00000508514 ADAMTSL1Q8N6G6 1762 aa23.41■■□□□ 1.34
SKP2-204ENST00000508514 GRIPAP1Q4V328 841 aa23.4■■□□□ 1.34
SKP2-204ENST00000508514 EAPPQ56P03 285 aaPredicted RBP23.4■■□□□ 1.34
SKP2-204ENST00000508514 CFAP44Q96MT7 982 aa23.4■■□□□ 1.34
SKP2-204ENST00000508514 ZNF853P0CG23 659 aa23.39■■□□□ 1.33
SKP2-204ENST00000508514 HSP90AB3PQ58FF7 597 aa23.39■■□□□ 1.33
SKP2-204ENST00000508514 HDGFL1Q5TGJ6 251 aa23.39■■□□□ 1.33
SKP2-204ENST00000508514 LARGE2Q8N3Y3 721 aa23.39■■□□□ 1.33
SKP2-204ENST00000508514 MBIPQ9NS73 344 aa23.39■■□□□ 1.33
SKP2-204ENST00000508514 LTBP1Q14766 1721 aa23.39■■□□□ 1.33
SKP2-204ENST00000508514 HOXB7P09629 217 aa23.38■■□□□ 1.33
SKP2-204ENST00000508514 MKRN1Q9UHC7 482 aaKnown RBP23.38■■□□□ 1.33
SKP2-204ENST00000508514 TRMT112Q9UI30 125 aaKnown RBP23.38■■□□□ 1.33
SKP2-204ENST00000508514 ANKRD36CQ5JPF3 1778 aa23.37■■□□□ 1.33
SKP2-204ENST00000508514 HSPA1AP0DMV8 641 aaKnown RBP23.37■■□□□ 1.33
SKP2-204ENST00000508514 HSPA1BP0DMV9 641 aaKnown RBP23.37■■□□□ 1.33
SKP2-204ENST00000508514 SCNN1DP51172 638 aa23.37■■□□□ 1.33
SKP2-204ENST00000508514 DUSP27Q5VZP5 1158 aa23.37■■□□□ 1.33
SKP2-204ENST00000508514 PLBD2Q8NHP8 589 aa23.37■■□□□ 1.33
SKP2-204ENST00000508514 RTFDC1Q9BY42 306 aaPredicted RBP23.37■■□□□ 1.33
SKP2-204ENST00000508514 GJA3Q9Y6H8 435 aa23.37■■□□□ 1.33
SKP2-204ENST00000508514 APAF1O14727 1248 aa23.36■■□□□ 1.33
SKP2-204ENST00000508514 EIF6P56537 245 aaKnown RBP23.36■■□□□ 1.33
SKP2-204ENST00000508514 AOC3Q16853 763 aa23.36■■□□□ 1.33
SKP2-204ENST00000508514 MAP1SQ66K74 1059 aaPredicted RBP23.36■■□□□ 1.33
SKP2-204ENST00000508514 ANKRD13DQ6ZTN6 518 aa23.36■■□□□ 1.33
SKP2-204ENST00000508514 ISCA1Q9BUE6 129 aa23.36■■□□□ 1.33
SKP2-204ENST00000508514 CLEC11AQ9Y240 323 aa23.36■■□□□ 1.33
SKP2-204ENST00000508514 LAMB2P55268 1798 aa23.36■■□□□ 1.33
SKP2-204ENST00000508514 SH3TC1Q8TE82 1336 aa23.35■■□□□ 1.33
SKP2-204ENST00000508514 BBOX1O75936 387 aa23.35■■□□□ 1.33
SKP2-204ENST00000508514 EPS15P42566 896 aa23.35■■□□□ 1.33
SKP2-204ENST00000508514 PNMA8AQ86V59 439 aaPredicted RBP23.35■■□□□ 1.33
SKP2-204ENST00000508514 SP8Q8IXZ3 490 aa23.35■■□□□ 1.33
SKP2-204ENST00000508514 CNTROBQ8N137 903 aa23.35■■□□□ 1.33
SKP2-204ENST00000508514 DBF4Q9UBU7 674 aaPredicted RBP23.35■■□□□ 1.33
SKP2-204ENST00000508514 ATP5J2-PTCD1G3V325 749 aa23.34■■□□□ 1.33
SKP2-204ENST00000508514 PPIP5K2O43314 1243 aa23.34■■□□□ 1.33
SKP2-204ENST00000508514 CNTNAP1P78357 1384 aa23.33■■□□□ 1.33
SKP2-204ENST00000508514 TMEM88BA6NKF7 163 aa23.32■■□□□ 1.32
SKP2-204ENST00000508514 GRAPQ13588 217 aa23.32■■□□□ 1.32
SKP2-204ENST00000508514 CCDC184Q52MB2 194 aa23.32■■□□□ 1.32
SKP2-204ENST00000508514 NIM1KQ8IY84 436 aa23.32■■□□□ 1.32
SKP2-204ENST00000508514 GRAPLQ8TC17 118 aaPredicted RBP23.32■■□□□ 1.32
SKP2-204ENST00000508514 FAM89AQ96GI7 184 aa23.32■■□□□ 1.32
SKP2-204ENST00000508514 TAF1P21675 1872 aa23.31■■□□□ 1.32
SKP2-204ENST00000508514 FMR1Q06787 632 aaKnown RBP eCLIP23.31■■□□□ 1.32
SKP2-204ENST00000508514 CXCL9Q07325 125 aa23.31■■□□□ 1.32
SKP2-204ENST00000508514 DDX46Q7L014 1031 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms