RNA–Protein interactions for RNA: ENST00000508438.1

SH3TC1-215, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 515 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-215ENST00000508438 SYNE4Q8N205 404 aa16.94■□□□□ 0.3
SH3TC1-215ENST00000508438 JMYQ8N9B5 988 aa16.94■□□□□ 0.3
SH3TC1-215ENST00000508438 L3MBTL3Q96JM7 780 aaPredicted RBP16.94■□□□□ 0.3
SH3TC1-215ENST00000508438 ZNF541Q9H0D2 1346 aa16.94■□□□□ 0.3
SH3TC1-215ENST00000508438 CHL1O00533 1208 aa16.93■□□□□ 0.3
SH3TC1-215ENST00000508438 IARSP41252 1262 aaKnown RBP16.93■□□□□ 0.3
SH3TC1-215ENST00000508438 WDR43Q15061 677 aaKnown RBP eCLIP16.93■□□□□ 0.3
SH3TC1-215ENST00000508438 KRT24Q2M2I5 525 aa16.93■□□□□ 0.3
SH3TC1-215ENST00000508438 PARP10Q53GL7 1025 aa16.93■□□□□ 0.3
SH3TC1-215ENST00000508438 PPP1R42Q7Z4L9 355 aa16.93■□□□□ 0.3
SH3TC1-215ENST00000508438 NECTIN2Q92692 538 aa16.93■□□□□ 0.3
SH3TC1-215ENST00000508438 RPGRQ92834 1020 aaKnown RBP16.93■□□□□ 0.3
SH3TC1-215ENST00000508438 ADAMTS8Q9UP79 889 aa16.93■□□□□ 0.3
SH3TC1-215ENST00000508438 LAMB2P55268 1798 aa16.92■□□□□ 0.3
SH3TC1-215ENST00000508438 SLC51AQ86UW1 340 aa16.92■□□□□ 0.3
SH3TC1-215ENST00000508438 PSMD1Q99460 953 aa16.92■□□□□ 0.3
SH3TC1-215ENST00000508438 COL4A5P29400 1685 aa16.91■□□□□ 0.3
SH3TC1-215ENST00000508438 CC2D2BQ6DHV5 1058 aa16.91■□□□□ 0.3
SH3TC1-215ENST00000508438 CHADLQ6NUI6 762 aa16.91■□□□□ 0.3
SH3TC1-215ENST00000508438 COPS6Q7L5N1 327 aa16.91■□□□□ 0.3
SH3TC1-215ENST00000508438 XAGE3Q8WTP9 111 aa16.91■□□□□ 0.3
SH3TC1-215ENST00000508438 CRAMP1Q96RY5 1269 aa16.91■□□□□ 0.3
SH3TC1-215ENST00000508438 PRKRIP1Q9H875 184 aaPredicted RBP16.91■□□□□ 0.3
SH3TC1-215ENST00000508438 IQCA1LA6NCM1 817 aa16.9■□□□□ 0.3
SH3TC1-215ENST00000508438 FZD9O00144 591 aa16.9■□□□□ 0.3
SH3TC1-215ENST00000508438 AIMP1Q12904 312 aaKnown RBP16.9■□□□□ 0.3
SH3TC1-215ENST00000508438 RBM17Q96I25 401 aaKnown RBP16.9■□□□□ 0.3
SH3TC1-215ENST00000508438 UTP14AQ9BVJ6 771 aaKnown RBP16.9■□□□□ 0.3
SH3TC1-215ENST00000508438 TAF1DQ9H5J8 278 aaPredicted RBP16.9■□□□□ 0.3
SH3TC1-215ENST00000508438 DDX21Q9NR30 783 aaKnown RBP eCLIP16.9■□□□□ 0.3
SH3TC1-215ENST00000508438 LAS1LQ9Y4W2 734 aaKnown RBP16.9■□□□□ 0.3
SH3TC1-215ENST00000508438 SLC10A5Q5PT55 438 aa16.89■□□□□ 0.29
SH3TC1-215ENST00000508438 NLRP3Q96P20 1036 aa16.89■□□□□ 0.29
SH3TC1-215ENST00000508438 ADAMTSL1Q8N6G6 1762 aa16.88■□□□□ 0.29
SH3TC1-215ENST00000508438 TCERG1O14776 1098 aaKnown RBP16.88■□□□□ 0.29
SH3TC1-215ENST00000508438 PPEF1O14829 653 aaPredicted RBP16.88■□□□□ 0.29
SH3TC1-215ENST00000508438 HSP90AB3PQ58FF7 597 aa16.88■□□□□ 0.29
SH3TC1-215ENST00000508438 NLRP10Q86W26 655 aa16.88■□□□□ 0.29
SH3TC1-215ENST00000508438 CHPF2Q9P2E5 772 aa16.88■□□□□ 0.29
SH3TC1-215ENST00000508438 RNF123Q5XPI4 1314 aa16.88■□□□□ 0.29
SH3TC1-215ENST00000508438 TCIRG1Q13488 830 aa16.87■□□□□ 0.29
SH3TC1-215ENST00000508438 LDHDQ86WU2 507 aa16.87■□□□□ 0.29
SH3TC1-215ENST00000508438 HACL1Q9UJ83 578 aa16.87■□□□□ 0.29
SH3TC1-215ENST00000508438 PCNTO95613 3336 aa16.87■□□□□ 0.29
SH3TC1-215ENST00000508438 HOXB7P09629 217 aa16.86■□□□□ 0.29
SH3TC1-215ENST00000508438 GRIPAP1Q4V328 841 aa16.86■□□□□ 0.29
SH3TC1-215ENST00000508438 HDGFL1Q5TGJ6 251 aa16.86■□□□□ 0.29
SH3TC1-215ENST00000508438 GPC2Q8N158 579 aa16.86■□□□□ 0.29
SH3TC1-215ENST00000508438 JDP2Q8WYK2 163 aa16.86■□□□□ 0.29
SH3TC1-215ENST00000508438 CFAP44Q96MT7 982 aa16.86■□□□□ 0.29
SH3TC1-215ENST00000508438 ABCC4O15439 1325 aa16.86■□□□□ 0.29
SH3TC1-215ENST00000508438 TAF1P21675 1872 aa16.86■□□□□ 0.29
SH3TC1-215ENST00000508438 EPHX2P34913 555 aa16.85■□□□□ 0.29
SH3TC1-215ENST00000508438 EAPPQ56P03 285 aaPredicted RBP16.85■□□□□ 0.29
SH3TC1-215ENST00000508438 PASKQ96RG2 1323 aa16.85■□□□□ 0.29
SH3TC1-215ENST00000508438 LTBP1Q14766 1721 aa16.84■□□□□ 0.29
SH3TC1-215ENST00000508438 DDX60Q8IY21 1712 aaKnown RBP16.84■□□□□ 0.29
SH3TC1-215ENST00000508438 HCLS1P14317 486 aaPredicted RBP16.84■□□□□ 0.29
SH3TC1-215ENST00000508438 LARGE2Q8N3Y3 721 aa16.84■□□□□ 0.29
SH3TC1-215ENST00000508438 CREBZFQ9NS37 354 aa16.84■□□□□ 0.29
SH3TC1-215ENST00000508438 MBIPQ9NS73 344 aa16.84■□□□□ 0.29
SH3TC1-215ENST00000508438 TRMT112Q9UI30 125 aaKnown RBP16.84■□□□□ 0.29
SH3TC1-215ENST00000508438 ATP6V0A2Q9Y487 856 aa16.84■□□□□ 0.29
SH3TC1-215ENST00000508438 ITGBL1O95965 494 aaPredicted RBP16.83■□□□□ 0.28
SH3TC1-215ENST00000508438 ZNF853P0CG23 659 aa16.83■□□□□ 0.28
SH3TC1-215ENST00000508438 EIF6P56537 245 aaKnown RBP16.83■□□□□ 0.28
SH3TC1-215ENST00000508438 DUSP27Q5VZP5 1158 aa16.83■□□□□ 0.28
SH3TC1-215ENST00000508438 PLBD2Q8NHP8 589 aa16.83■□□□□ 0.28
SH3TC1-215ENST00000508438 SH3TC1Q8TE82 1336 aa16.83■□□□□ 0.28
SH3TC1-215ENST00000508438 DBF4Q9UBU7 674 aaPredicted RBP16.83■□□□□ 0.28
SH3TC1-215ENST00000508438 APAF1O14727 1248 aa16.82■□□□□ 0.28
SH3TC1-215ENST00000508438 ANKRD13DQ6ZTN6 518 aa16.82■□□□□ 0.28
SH3TC1-215ENST00000508438 ZNF428Q96B54 188 aa16.82■□□□□ 0.28
SH3TC1-215ENST00000508438 CLEC11AQ9Y240 323 aa16.82■□□□□ 0.28
SH3TC1-215ENST00000508438 GJA3Q9Y6H8 435 aa16.82■□□□□ 0.28
SH3TC1-215ENST00000508438 PPIP5K2O43314 1243 aa16.81■□□□□ 0.28
SH3TC1-215ENST00000508438 BBOX1O75936 387 aa16.81■□□□□ 0.28
SH3TC1-215ENST00000508438 PNMA8AQ86V59 439 aaPredicted RBP16.81■□□□□ 0.28
SH3TC1-215ENST00000508438 SP8Q8IXZ3 490 aa16.81■□□□□ 0.28
SH3TC1-215ENST00000508438 ISCA1Q9BUE6 129 aa16.81■□□□□ 0.28
SH3TC1-215ENST00000508438 RTFDC1Q9BY42 306 aaPredicted RBP16.81■□□□□ 0.28
SH3TC1-215ENST00000508438 SCNN1DP51172 638 aa16.8■□□□□ 0.28
SH3TC1-215ENST00000508438 AOC3Q16853 763 aa16.8■□□□□ 0.28
SH3TC1-215ENST00000508438 COL13A1Q5TAT6 717 aaPredicted RBP16.8■□□□□ 0.28
SH3TC1-215ENST00000508438 DDX46Q7L014 1031 aaKnown RBP16.8■□□□□ 0.28
SH3TC1-215ENST00000508438 NIM1KQ8IY84 436 aa16.8■□□□□ 0.28
SH3TC1-215ENST00000508438 TMX4Q9H1E5 349 aaPredicted RBP16.8■□□□□ 0.28
SH3TC1-215ENST00000508438 IFT57Q9NWB7 429 aa16.8■□□□□ 0.28
SH3TC1-215ENST00000508438 HYPKQ9NX55 129 aa16.8■□□□□ 0.28
SH3TC1-215ENST00000508438 MKRN1Q9UHC7 482 aaKnown RBP16.8■□□□□ 0.28
SH3TC1-215ENST00000508438 LRRC37AA6NMS7 1700 aa16.79■□□□□ 0.28
SH3TC1-215ENST00000508438 ATP5J2-PTCD1G3V325 749 aa16.79■□□□□ 0.28
SH3TC1-215ENST00000508438 HSPA1AP0DMV8 641 aaKnown RBP16.79■□□□□ 0.28
SH3TC1-215ENST00000508438 HSPA1BP0DMV9 641 aaKnown RBP16.79■□□□□ 0.28
SH3TC1-215ENST00000508438 GRAPQ13588 217 aa16.79■□□□□ 0.28
SH3TC1-215ENST00000508438 MAP1SQ66K74 1059 aaPredicted RBP16.79■□□□□ 0.28
SH3TC1-215ENST00000508438 GRAPLQ8TC17 118 aaPredicted RBP16.79■□□□□ 0.28
SH3TC1-215ENST00000508438 VPS33BQ9H267 617 aa16.79■□□□□ 0.28
SH3TC1-215ENST00000508438 DUOX1Q9NRD9 1551 aa16.78■□□□□ 0.28
SH3TC1-215ENST00000508438 EPS15P42566 896 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms