RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 HSP90AB1P08238 724 aaKnown RBP9.15□□□□□ -0.94
PDGFRA-206ENST00000508170 GJA8P48165 433 aa9.15□□□□□ -0.94
PDGFRA-206ENST00000508170 FAM83BQ5T0W9 1011 aa9.15□□□□□ -0.94
PDGFRA-206ENST00000508170 DUSP27Q5VZP5 1158 aa9.15□□□□□ -0.94
PDGFRA-206ENST00000508170 NBPF10Q6P3W6 841 aaKnown RBP9.15□□□□□ -0.94
PDGFRA-206ENST00000508170 PLEKHM2Q8IWE5 1019 aa9.15□□□□□ -0.94
PDGFRA-206ENST00000508170 MYO1HQ8N1T3 1032 aa9.15□□□□□ -0.94
PDGFRA-206ENST00000508170 GOLGA1Q92805 767 aa9.15□□□□□ -0.94
PDGFRA-206ENST00000508170 ZNF830Q96NB3 372 aaPredicted RBP9.15□□□□□ -0.94
PDGFRA-206ENST00000508170 CHMP3Q9Y3E7 222 aa9.15□□□□□ -0.94
PDGFRA-206ENST00000508170 PTGER2P43116 358 aa9.15□□□□□ -0.95
PDGFRA-206ENST00000508170 MAPK8P45983 427 aa9.15□□□□□ -0.95
PDGFRA-206ENST00000508170 WASHC5Q12768 1159 aa9.15□□□□□ -0.95
PDGFRA-206ENST00000508170 NDUFAF2Q8N183 169 aa9.15□□□□□ -0.95
PDGFRA-206ENST00000508170 LSM14AQ8ND56 463 aaKnown RBP9.15□□□□□ -0.95
PDGFRA-206ENST00000508170 SRA1Q9HD15 236 aaKnown RBP9.15□□□□□ -0.95
PDGFRA-206ENST00000508170 FBXO2Q9UK22 296 aaPredicted RBP9.15□□□□□ -0.95
PDGFRA-206ENST00000508170 RSF1Q96T23 1441 aaPredicted RBP9.14□□□□□ -0.95
PDGFRA-206ENST00000508170 PRRT4C9JH25 899 aa9.14□□□□□ -0.95
PDGFRA-206ENST00000508170 SKIP12755 728 aa9.14□□□□□ -0.95
PDGFRA-206ENST00000508170 SLC4A3P48751 1232 aa9.14□□□□□ -0.95
PDGFRA-206ENST00000508170 NFX1Q12986 1120 aaKnown RBP9.14□□□□□ -0.95
PDGFRA-206ENST00000508170 OCLNQ16625 522 aa9.14□□□□□ -0.95
PDGFRA-206ENST00000508170 ANKRD13DQ6ZTN6 518 aa9.14□□□□□ -0.95
PDGFRA-206ENST00000508170 DEPDC7Q96QD5 511 aa9.14□□□□□ -0.95
PDGFRA-206ENST00000508170 LGR6Q9HBX8 967 aa9.14□□□□□ -0.95
PDGFRA-206ENST00000508170 MAP3K9P80192 1104 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 DPYDQ12882 1025 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 LMNTD2Q8IXW0 634 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 TTC8Q8TAM2 541 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 ZNF408Q9H9D4 720 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 NGRNQ9NPE2 291 aaKnown RBP9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 ODF2LQ9ULJ1 636 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 DAAM1Q9Y4D1 1078 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 LMNB1P20700 586 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 FKBP4Q02790 459 aaKnown RBP eCLIP9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 MORC3Q14149 939 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 HLTFQ14527 1009 aaKnown RBP eCLIP9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 SEPT2Q15019 361 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 TAF11Q15544 211 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 RNF135Q8IUD6 432 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 NFATC2IPQ8NCF5 419 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 HELQQ8TDG4 1101 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 LRRN4Q8WUT4 740 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 RBCK1Q9BYM8 510 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 CXXC1Q9P0U4 656 aaPredicted RBP9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 SEPT3Q9UH03 358 aa9.13□□□□□ -0.95
PDGFRA-206ENST00000508170 FIBPO43427 364 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 POU3F3P20264 500 aaPredicted RBP9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 ITGAEP38570 1179 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 EIF4G2P78344 907 aaKnown RBP eCLIP9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 MCL1Q07820 350 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 TKFCQ3LXA3 575 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 NYAP1Q6ZVC0 841 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 GPR101Q96P66 508 aaPredicted RBP9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 SETDB2Q96T68 719 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 KMT5AQ9NQR1 393 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 SIRPGQ9P1W8 387 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 SPG7Q9UQ90 795 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 UVSSAQ2YD98 709 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 CPXCR1Q8N123 301 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 FRS2Q8WU20 508 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 CDHR1Q96JP9 859 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 SERINC2Q96SA4 455 aa9.12□□□□□ -0.95
PDGFRA-206ENST00000508170 PABPN1LA6NDY0 278 aaKnown RBP9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 CCDC85CA6NKD9 419 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 RRP9O43818 475 aaKnown RBP9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 DALRD3Q5D0E6 543 aaKnown RBP9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 ANO1Q5XXA6 986 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 SMAP1Q8IYB5 467 aaPredicted RBP9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 PPHLN1Q8NEY8 458 aaKnown RBP9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 SKA1Q96BD8 255 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 CD248Q9HCU0 757 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 NEUROD4Q9HD90 331 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 GTF2A1LQ9UNN4 478 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 hCG_1984214I3L0E3 225 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 SSR1P43307 286 aaKnown RBP9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 HOMER1Q86YM7 354 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 LILRB2Q8N423 598 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 ANKRD42Q8N9B4 389 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 PRIMPOLQ96LW4 560 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 FEZ1Q99689 392 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 FAM13BQ9NYF5 915 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 IP6K2Q9UHH9 426 aa9.11□□□□□ -0.95
PDGFRA-206ENST00000508170 TCEA3O75764 348 aa9.1□□□□□ -0.95
PDGFRA-206ENST00000508170 HYIQ5T013 277 aa9.1□□□□□ -0.95
PDGFRA-206ENST00000508170 SLF2Q8IX21 1173 aa9.1□□□□□ -0.95
PDGFRA-206ENST00000508170 FAM174AQ8TBP5 190 aa9.1□□□□□ -0.95
PDGFRA-206ENST00000508170 ATRIPQ8WXE1 791 aa9.1□□□□□ -0.95
PDGFRA-206ENST00000508170 DIAPH1O60610 1272 aaKnown RBP9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 TSPAN7P41732 249 aa9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 RAB27AP51159 221 aa9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 ZC3H12AQ5D1E8 599 aaKnown RBP9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 KRT26Q7Z3Y9 468 aa9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 TTC30AQ86WT1 665 aa9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 SELENOOQ9BVL4 669 aa9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 PRKD2Q9BZL6 878 aa9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 ZIM2Q9NZV7 527 aa9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 ORC4O43929 436 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms