RNA–Protein interactions for RNA: ENST00000505672.5

CCND3-208, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 932 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-208ENST00000505672 NEUROD2Q15784 382 aa23.59■■□□□ 1.37
CCND3-208ENST00000505672 LDHDQ86WU2 507 aa23.59■■□□□ 1.37
CCND3-208ENST00000505672 ZNF34Q8IZ26 560 aa23.59■■□□□ 1.37
CCND3-208ENST00000505672 RUNDC1Q96C34 613 aa23.59■■□□□ 1.37
CCND3-208ENST00000505672 ZBTB3Q9H5J0 574 aa23.59■■□□□ 1.37
CCND3-208ENST00000505672 ADAMTS8Q9UP79 889 aa23.59■■□□□ 1.37
CCND3-208ENST00000505672 HOXA10P31260 410 aaPredicted RBP23.58■■□□□ 1.37
CCND3-208ENST00000505672 LRP10Q7Z4F1 713 aa23.58■■□□□ 1.37
CCND3-208ENST00000505672 MKRN1Q9UHC7 482 aaKnown RBP23.58■■□□□ 1.37
CCND3-208ENST00000505672 KIF6Q6ZMV9 814 aa23.57■■□□□ 1.36
CCND3-208ENST00000505672 PSMD1Q99460 953 aa23.57■■□□□ 1.36
CCND3-208ENST00000505672 PDIA6Q15084 440 aa23.56■■□□□ 1.36
CCND3-208ENST00000505672 C3orf67Q6ZVT6 689 aa23.56■■□□□ 1.36
CCND3-208ENST00000505672 HACL1Q9UJ83 578 aa23.56■■□□□ 1.36
CCND3-208ENST00000505672 COL4A5P29400 1685 aa23.56■■□□□ 1.36
CCND3-208ENST00000505672 NTSR2O95665 410 aa23.55■■□□□ 1.36
CCND3-208ENST00000505672 GIGYF2Q6Y7W6 1299 aaKnown RBP23.55■■□□□ 1.36
CCND3-208ENST00000505672 TNS4Q8IZW8 715 aa23.55■■□□□ 1.36
CCND3-208ENST00000505672 RIC1Q4ADV7 1423 aa23.55■■□□□ 1.36
CCND3-208ENST00000505672 RNF123Q5XPI4 1314 aa23.55■■□□□ 1.36
CCND3-208ENST00000505672 ADAMTSL1Q8N6G6 1762 aa23.55■■□□□ 1.36
CCND3-208ENST00000505672 IBTKQ9P2D0 1353 aaPredicted RBP23.54■■□□□ 1.36
CCND3-208ENST00000505672 EPHX2P34913 555 aa23.54■■□□□ 1.36
CCND3-208ENST00000505672 EAPPQ56P03 285 aaPredicted RBP23.54■■□□□ 1.36
CCND3-208ENST00000505672 BABAM1Q9NWV8 329 aa23.54■■□□□ 1.36
CCND3-208ENST00000505672 GPC2Q8N158 579 aa23.53■■□□□ 1.36
CCND3-208ENST00000505672 ERBB4Q15303 1308 aa23.53■■□□□ 1.36
CCND3-208ENST00000505672 PROSER3Q2NL68 480 aa23.52■■□□□ 1.36
CCND3-208ENST00000505672 CC2D2BQ6DHV5 1058 aa23.52■■□□□ 1.36
CCND3-208ENST00000505672 RPGRQ92834 1020 aaKnown RBP23.52■■□□□ 1.36
CCND3-208ENST00000505672 CRAMP1Q96RY5 1269 aa23.52■■□□□ 1.36
CCND3-208ENST00000505672 TRIM35Q9UPQ4 493 aa23.52■■□□□ 1.36
CCND3-208ENST00000505672 CNTNAP1P78357 1384 aa23.52■■□□□ 1.36
CCND3-208ENST00000505672 ANXA1P04083 346 aa23.51■■□□□ 1.35
CCND3-208ENST00000505672 CLEC11AQ9Y240 323 aa23.51■■□□□ 1.35
CCND3-208ENST00000505672 CAPN15O75808 1086 aa23.5■■□□□ 1.35
CCND3-208ENST00000505672 EIF2S2P20042 333 aaKnown RBP23.5■■□□□ 1.35
CCND3-208ENST00000505672 MAP1SQ66K74 1059 aaPredicted RBP23.5■■□□□ 1.35
CCND3-208ENST00000505672 JDP2Q8WYK2 163 aa23.5■■□□□ 1.35
CCND3-208ENST00000505672 RBM17Q96I25 401 aaKnown RBP23.5■■□□□ 1.35
CCND3-208ENST00000505672 TMEM88BA6NKF7 163 aa23.49■■□□□ 1.35
CCND3-208ENST00000505672 TCERG1O14776 1098 aaKnown RBP23.49■■□□□ 1.35
CCND3-208ENST00000505672 SLC10A5Q5PT55 438 aa23.49■■□□□ 1.35
CCND3-208ENST00000505672 PNMA8AQ86V59 439 aaPredicted RBP23.49■■□□□ 1.35
CCND3-208ENST00000505672 LAS1LQ9Y4W2 734 aaKnown RBP23.49■■□□□ 1.35
CCND3-208ENST00000505672 LTBP1Q14766 1721 aa23.48■■□□□ 1.35
CCND3-208ENST00000505672 VEGFBP49765 207 aa23.48■■□□□ 1.35
CCND3-208ENST00000505672 CNTROBQ8N137 903 aa23.48■■□□□ 1.35
CCND3-208ENST00000505672 CHL1O00533 1208 aa23.47■■□□□ 1.35
CCND3-208ENST00000505672 PPEF1O14829 653 aaPredicted RBP23.47■■□□□ 1.35
CCND3-208ENST00000505672 PARP10Q53GL7 1025 aa23.47■■□□□ 1.35
CCND3-208ENST00000505672 PPP1R42Q7Z4L9 355 aa23.47■■□□□ 1.35
CCND3-208ENST00000505672 GJA3Q9Y6H8 435 aa23.47■■□□□ 1.35
CCND3-208ENST00000505672 ANKRD36CQ5JPF3 1778 aa23.47■■□□□ 1.35
CCND3-208ENST00000505672 EIF6P56537 245 aaKnown RBP23.46■■□□□ 1.35
CCND3-208ENST00000505672 GRIPAP1Q4V328 841 aa23.46■■□□□ 1.35
CCND3-208ENST00000505672 NLRP3Q96P20 1036 aa23.46■■□□□ 1.35
CCND3-208ENST00000505672 ZNF316A6NFI3 1004 aaPredicted RBP23.45■■□□□ 1.34
CCND3-208ENST00000505672 FOXN1O15353 648 aa23.45■■□□□ 1.34
CCND3-208ENST00000505672 SCNN1DP51172 638 aa23.45■■□□□ 1.34
CCND3-208ENST00000505672 LARGE2Q8N3Y3 721 aa23.45■■□□□ 1.34
CCND3-208ENST00000505672 UTP14AQ9BVJ6 771 aaKnown RBP23.45■■□□□ 1.34
CCND3-208ENST00000505672 APAF1O14727 1248 aa23.44■■□□□ 1.34
CCND3-208ENST00000505672 EPS15P42566 896 aa23.44■■□□□ 1.34
CCND3-208ENST00000505672 KRT24Q2M2I5 525 aa23.44■■□□□ 1.34
CCND3-208ENST00000505672 COPS6Q7L5N1 327 aa23.44■■□□□ 1.34
CCND3-208ENST00000505672 NECTIN2Q92692 538 aa23.44■■□□□ 1.34
CCND3-208ENST00000505672 ATP6V0A2Q9Y487 856 aa23.43■■□□□ 1.34
CCND3-208ENST00000505672 ABCC4O15439 1325 aa23.42■■□□□ 1.34
CCND3-208ENST00000505672 FMR1Q06787 632 aaKnown RBP eCLIP23.42■■□□□ 1.341e-6■■■■□ 20.4
CCND3-208ENST00000505672 CCDC184Q52MB2 194 aa23.42■■□□□ 1.34
CCND3-208ENST00000505672 XAGE3Q8WTP9 111 aa23.42■■□□□ 1.34
CCND3-208ENST00000505672 RASSF10A6NK89 507 aa23.41■■□□□ 1.34
CCND3-208ENST00000505672 AIMP1Q12904 312 aaKnown RBP23.41■■□□□ 1.34
CCND3-208ENST00000505672 NLRP10Q86W26 655 aa23.41■■□□□ 1.34
CCND3-208ENST00000505672 HCLS1P14317 486 aaPredicted RBP23.4■■□□□ 1.34
CCND3-208ENST00000505672 AOC3Q16853 763 aa23.4■■□□□ 1.34
CCND3-208ENST00000505672 CFAP44Q96MT7 982 aa23.4■■□□□ 1.34
CCND3-208ENST00000505672 RTFDC1Q9BY42 306 aaPredicted RBP23.4■■□□□ 1.34
CCND3-208ENST00000505672 DDX21Q9NR30 783 aaKnown RBP eCLIP23.4■■□□□ 1.34
CCND3-208ENST00000505672 PPIP5K2O43314 1243 aa23.39■■□□□ 1.33
CCND3-208ENST00000505672 TCIRG1Q13488 830 aa23.39■■□□□ 1.33
CCND3-208ENST00000505672 DEFB115Q30KQ5 88 aa23.39■■□□□ 1.33
CCND3-208ENST00000505672 NIM1KQ8IY84 436 aa23.39■■□□□ 1.33
CCND3-208ENST00000505672 WBP1LQ9NX94 342 aa23.39■■□□□ 1.33
CCND3-208ENST00000505672 LAMB2P55268 1798 aa23.38■■□□□ 1.33
CCND3-208ENST00000505672 LMOD1P29536 600 aaPredicted RBP23.38■■□□□ 1.33
CCND3-208ENST00000505672 VPS33BQ9H267 617 aa23.38■■□□□ 1.33
CCND3-208ENST00000505672 BBOX1O75936 387 aa23.37■■□□□ 1.33
CCND3-208ENST00000505672 CXCL9Q07325 125 aa23.37■■□□□ 1.33
CCND3-208ENST00000505672 SP8Q8IXZ3 490 aa23.37■■□□□ 1.33
CCND3-208ENST00000505672 ZNF428Q96B54 188 aa23.37■■□□□ 1.33
CCND3-208ENST00000505672 MBIPQ9NS73 344 aa23.37■■□□□ 1.33
CCND3-208ENST00000505672 HSP90AB3PQ58FF7 597 aa23.36■■□□□ 1.33
CCND3-208ENST00000505672 HDGFL1Q5TGJ6 251 aa23.36■■□□□ 1.33
CCND3-208ENST00000505672 USP50Q70EL3 339 aaPredicted RBP23.36■■□□□ 1.33
CCND3-208ENST00000505672 PRDM10Q9NQV6 1147 aa23.36■■□□□ 1.33
CCND3-208ENST00000505672 CHPF2Q9P2E5 772 aa23.36■■□□□ 1.33
CCND3-208ENST00000505672 TRMT112Q9UI30 125 aaKnown RBP23.36■■□□□ 1.33
CCND3-208ENST00000505672 ANP32CO43423 234 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 195.4 ms