RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 LTBP1Q14766 1721 aa22.41■■□□□ 1.18
UBE2D3-213ENST00000502690 GIGYF2Q6Y7W6 1299 aaKnown RBP22.41■■□□□ 1.18
UBE2D3-213ENST00000502690 NECTIN2Q92692 538 aa22.4■■□□□ 1.18
UBE2D3-213ENST00000502690 L3MBTL3Q96JM7 780 aaPredicted RBP22.4■■□□□ 1.18
UBE2D3-213ENST00000502690 ALDH1B1P30837 517 aa22.39■■□□□ 1.17
UBE2D3-213ENST00000502690 NEUROD2Q15784 382 aa22.39■■□□□ 1.17
UBE2D3-213ENST00000502690 SYNE4Q8N205 404 aa22.39■■□□□ 1.17
UBE2D3-213ENST00000502690 HOXA10P31260 410 aaPredicted RBP22.38■■□□□ 1.17
UBE2D3-213ENST00000502690 IARSP41252 1262 aaKnown RBP22.38■■□□□ 1.17
UBE2D3-213ENST00000502690 CHADLQ6NUI6 762 aa22.38■■□□□ 1.17
UBE2D3-213ENST00000502690 RTKN2Q8IZC4 609 aa22.38■■□□□ 1.17
UBE2D3-213ENST00000502690 TRIM35Q9UPQ4 493 aa22.38■■□□□ 1.17
UBE2D3-213ENST00000502690 TAF1DQ9H5J8 278 aaPredicted RBP22.37■■□□□ 1.17
UBE2D3-213ENST00000502690 DDX60Q8IY21 1712 aaKnown RBP22.37■■□□□ 1.17
UBE2D3-213ENST00000502690 RPGRQ92834 1020 aaKnown RBP22.36■■□□□ 1.17
UBE2D3-213ENST00000502690 FZD9O00144 591 aa22.35■■□□□ 1.17
UBE2D3-213ENST00000502690 TCERG1O14776 1098 aaKnown RBP22.35■■□□□ 1.17
UBE2D3-213ENST00000502690 LMOD3Q0VAK6 560 aa22.35■■□□□ 1.17
UBE2D3-213ENST00000502690 PSMD1Q99460 953 aa22.35■■□□□ 1.17
UBE2D3-213ENST00000502690 BABAM1Q9NWV8 329 aa22.35■■□□□ 1.17
UBE2D3-213ENST00000502690 RNF123Q5XPI4 1314 aa22.34■■□□□ 1.17
UBE2D3-213ENST00000502690 XAGE3Q8WTP9 111 aa22.34■■□□□ 1.17
UBE2D3-213ENST00000502690 ZNF428Q96B54 188 aa22.34■■□□□ 1.17
UBE2D3-213ENST00000502690 IQCA1LA6NCM1 817 aa22.33■■□□□ 1.17
UBE2D3-213ENST00000502690 CHL1O00533 1208 aa22.33■■□□□ 1.17
UBE2D3-213ENST00000502690 COL13A1Q5TAT6 717 aaPredicted RBP22.33■■□□□ 1.17
UBE2D3-213ENST00000502690 COPS6Q7L5N1 327 aa22.33■■□□□ 1.17
UBE2D3-213ENST00000502690 RUNDC1Q96C34 613 aa22.33■■□□□ 1.17
UBE2D3-213ENST00000502690 ADAMTS8Q9UP79 889 aa22.33■■□□□ 1.17
UBE2D3-213ENST00000502690 COL4A1P02462 1669 aa22.33■■□□□ 1.16
UBE2D3-213ENST00000502690 PPEF1O14829 653 aaPredicted RBP22.32■■□□□ 1.16
UBE2D3-213ENST00000502690 AIMP1Q12904 312 aaKnown RBP22.32■■□□□ 1.16
UBE2D3-213ENST00000502690 CRAMP1Q96RY5 1269 aa22.32■■□□□ 1.16
UBE2D3-213ENST00000502690 LAS1LQ9Y4W2 734 aaKnown RBP22.32■■□□□ 1.16
UBE2D3-213ENST00000502690 PASKQ96RG2 1323 aa22.31■■□□□ 1.16
UBE2D3-213ENST00000502690 PARP10Q53GL7 1025 aa22.31■■□□□ 1.16
UBE2D3-213ENST00000502690 PPP1R42Q7Z4L9 355 aa22.31■■□□□ 1.16
UBE2D3-213ENST00000502690 LDHDQ86WU2 507 aa22.31■■□□□ 1.16
UBE2D3-213ENST00000502690 UTP14AQ9BVJ6 771 aaKnown RBP22.31■■□□□ 1.16
UBE2D3-213ENST00000502690 CHPF2Q9P2E5 772 aa22.31■■□□□ 1.16
UBE2D3-213ENST00000502690 ABCC4O15439 1325 aa22.31■■□□□ 1.16
UBE2D3-213ENST00000502690 EAPPQ56P03 285 aaPredicted RBP22.3■■□□□ 1.16
UBE2D3-213ENST00000502690 NLRP10Q86W26 655 aa22.3■■□□□ 1.16
UBE2D3-213ENST00000502690 RBM17Q96I25 401 aaKnown RBP22.3■■□□□ 1.16
UBE2D3-213ENST00000502690 HACL1Q9UJ83 578 aa22.3■■□□□ 1.16
UBE2D3-213ENST00000502690 EPHX2P34913 555 aa22.29■■□□□ 1.16
UBE2D3-213ENST00000502690 WDR43Q15061 677 aaKnown RBP eCLIP22.29■■□□□ 1.16
UBE2D3-213ENST00000502690 SLC10A5Q5PT55 438 aa22.29■■□□□ 1.16
UBE2D3-213ENST00000502690 CC2D2BQ6DHV5 1058 aa22.29■■□□□ 1.16
UBE2D3-213ENST00000502690 CREBZFQ9NS37 354 aa22.29■■□□□ 1.16
UBE2D3-213ENST00000502690 MKRN1Q9UHC7 482 aaKnown RBP22.29■■□□□ 1.16
UBE2D3-213ENST00000502690 LRRC37AA6NMS7 1700 aa22.28■■□□□ 1.16
UBE2D3-213ENST00000502690 ITGBL1O95965 494 aaPredicted RBP22.28■■□□□ 1.16
UBE2D3-213ENST00000502690 HSPA1AP0DMV8 641 aaKnown RBP22.28■■□□□ 1.16
UBE2D3-213ENST00000502690 HSPA1BP0DMV9 641 aaKnown RBP22.28■■□□□ 1.16
UBE2D3-213ENST00000502690 HCLS1P14317 486 aaPredicted RBP22.28■■□□□ 1.16
UBE2D3-213ENST00000502690 NLRP3Q96P20 1036 aa22.28■■□□□ 1.16
UBE2D3-213ENST00000502690 DDX21Q9NR30 783 aaKnown RBP eCLIP22.28■■□□□ 1.16
UBE2D3-213ENST00000502690 GPC2Q8N158 579 aa22.27■■□□□ 1.16
UBE2D3-213ENST00000502690 PRKRIP1Q9H875 184 aaPredicted RBP22.27■■□□□ 1.16
UBE2D3-213ENST00000502690 DUOX1Q9NRD9 1551 aa22.27■■□□□ 1.16
UBE2D3-213ENST00000502690 TCIRG1Q13488 830 aa22.26■■□□□ 1.15
UBE2D3-213ENST00000502690 MAP1SQ66K74 1059 aaPredicted RBP22.26■■□□□ 1.15
UBE2D3-213ENST00000502690 LARGE2Q8N3Y3 721 aa22.26■■□□□ 1.15
UBE2D3-213ENST00000502690 JDP2Q8WYK2 163 aa22.26■■□□□ 1.15
UBE2D3-213ENST00000502690 GJA3Q9Y6H8 435 aa22.26■■□□□ 1.15
UBE2D3-213ENST00000502690 SCNN1DP51172 638 aa22.25■■□□□ 1.15
UBE2D3-213ENST00000502690 HDGFL1Q5TGJ6 251 aa22.25■■□□□ 1.15
UBE2D3-213ENST00000502690 ATP6V0A2Q9Y487 856 aa22.25■■□□□ 1.15
UBE2D3-213ENST00000502690 AOC3Q16853 763 aa22.24■■□□□ 1.15
UBE2D3-213ENST00000502690 CLEC11AQ9Y240 323 aa22.24■■□□□ 1.15
UBE2D3-213ENST00000502690 CNTNAP1P78357 1384 aa22.24■■□□□ 1.15
UBE2D3-213ENST00000502690 HSP90AB3PQ58FF7 597 aa22.23■■□□□ 1.15
UBE2D3-213ENST00000502690 MBIPQ9NS73 344 aa22.23■■□□□ 1.15
UBE2D3-213ENST00000502690 TRMT112Q9UI30 125 aaKnown RBP22.23■■□□□ 1.15
UBE2D3-213ENST00000502690 PPIP5K2O43314 1243 aa22.22■■□□□ 1.15
UBE2D3-213ENST00000502690 EPS15P42566 896 aa22.22■■□□□ 1.15
UBE2D3-213ENST00000502690 EIF6P56537 245 aaKnown RBP22.22■■□□□ 1.15
UBE2D3-213ENST00000502690 SH3TC1Q8TE82 1336 aa22.22■■□□□ 1.15
UBE2D3-213ENST00000502690 TRPM7Q96QT4 1865 aa22.22■■□□□ 1.15
UBE2D3-213ENST00000502690 FMR1Q06787 632 aaKnown RBP eCLIP22.21■■□□□ 1.15
UBE2D3-213ENST00000502690 DUSP27Q5VZP5 1158 aa22.21■■□□□ 1.15
UBE2D3-213ENST00000502690 CFAP44Q96MT7 982 aa22.21■■□□□ 1.15
UBE2D3-213ENST00000502690 ATP5J2-PTCD1G3V325 749 aa22.2■■□□□ 1.14
UBE2D3-213ENST00000502690 HOXB7P09629 217 aa22.2■■□□□ 1.14
UBE2D3-213ENST00000502690 ZNF853P0CG23 659 aa22.2■■□□□ 1.14
UBE2D3-213ENST00000502690 GRIPAP1Q4V328 841 aa22.2■■□□□ 1.14
UBE2D3-213ENST00000502690 NIM1KQ8IY84 436 aa22.2■■□□□ 1.14
UBE2D3-213ENST00000502690 PLBD2Q8NHP8 589 aa22.2■■□□□ 1.14
UBE2D3-213ENST00000502690 ISCA1Q9BUE6 129 aa22.2■■□□□ 1.14
UBE2D3-213ENST00000502690 APAF1O14727 1248 aa22.19■■□□□ 1.14
UBE2D3-213ENST00000502690 PNMA8AQ86V59 439 aaPredicted RBP22.19■■□□□ 1.14
UBE2D3-213ENST00000502690 CNTROBQ8N137 903 aa22.19■■□□□ 1.14
UBE2D3-213ENST00000502690 RTFDC1Q9BY42 306 aaPredicted RBP22.19■■□□□ 1.14
UBE2D3-213ENST00000502690 TMEM88BA6NKF7 163 aa22.18■■□□□ 1.14
UBE2D3-213ENST00000502690 ANKRD13DQ6ZTN6 518 aa22.18■■□□□ 1.14
UBE2D3-213ENST00000502690 FAM89AQ96GI7 184 aa22.18■■□□□ 1.14
UBE2D3-213ENST00000502690 DBF4Q9UBU7 674 aaPredicted RBP22.18■■□□□ 1.14
UBE2D3-213ENST00000502690 VEGFBP49765 207 aa22.17■■□□□ 1.14
UBE2D3-213ENST00000502690 CXCL9Q07325 125 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms