RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 NBPF14Q5TI25 921 aa5□□□□□ -1.61
CLTC-209ENST00000498711 TRAF7Q6Q0C0 670 aa5□□□□□ -1.61
CLTC-209ENST00000498711 POTEEQ6S8J3 1075 aa5□□□□□ -1.61
CLTC-209ENST00000498711 SKAP1Q86WV1 359 aa5□□□□□ -1.61
CLTC-209ENST00000498711 DNAAF2Q9NVR5 837 aaKnown RBP5□□□□□ -1.61
CLTC-209ENST00000498711 EGFL7Q9UHF1 273 aa5□□□□□ -1.61
CLTC-209ENST00000498711 CCNYL3P0C7X3 344 aa4.99□□□□□ -1.61
CLTC-209ENST00000498711 LARGE2Q8N3Y3 721 aa4.99□□□□□ -1.61
CLTC-209ENST00000498711 FRAT1Q92837 279 aaPredicted RBP4.99□□□□□ -1.61
CLTC-209ENST00000498711 OCSTAMPQ9BR26 566 aa4.99□□□□□ -1.61
CLTC-209ENST00000498711 NOD1Q9Y239 953 aa4.99□□□□□ -1.61
CLTC-209ENST00000498711 SENP3-EIF4A1A0A087X0R7 540 aa4.99□□□□□ -1.61
CLTC-209ENST00000498711 ANKRD33BA6NCL7 494 aa4.99□□□□□ -1.61
CLTC-209ENST00000498711 BHMG1C9JSJ3 638 aaPredicted RBP4.99□□□□□ -1.61
CLTC-209ENST00000498711 ST18O60284 1047 aa4.99□□□□□ -1.61
CLTC-209ENST00000498711 CT47B1P0C2W7 299 aaPredicted RBP4.99□□□□□ -1.61
CLTC-209ENST00000498711 ANKLE2Q86XL3 938 aa4.99□□□□□ -1.61
CLTC-209ENST00000498711 NPAS4Q8IUM7 802 aa4.99□□□□□ -1.61
CLTC-209ENST00000498711 SIX5Q8N196 739 aa4.99□□□□□ -1.61
CLTC-209ENST00000498711 THAP11Q96EK4 314 aa4.99□□□□□ -1.61
CLTC-209ENST00000498711 AXIN2Q9Y2T1 843 aa4.99□□□□□ -1.61
CLTC-209ENST00000498711 PTCH1Q13635 1447 aa4.98□□□□□ -1.61
CLTC-209ENST00000498711 NSD2O96028 1365 aa4.98□□□□□ -1.61
CLTC-209ENST00000498711 NHSL1Q5SYE7 1610 aa4.98□□□□□ -1.61
CLTC-209ENST00000498711 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.98□□□□□ -1.61
CLTC-209ENST00000498711 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.98□□□□□ -1.61
CLTC-209ENST00000498711 COL3A1P02461 1466 aaPredicted RBP4.98□□□□□ -1.61
CLTC-209ENST00000498711 QRICH2Q9H0J4 1663 aa4.98□□□□□ -1.61
CLTC-209ENST00000498711 RPGRIP1LQ68CZ1 1315 aa4.98□□□□□ -1.61
CLTC-209ENST00000498711 APAF1O14727 1248 aa4.98□□□□□ -1.61
CLTC-209ENST00000498711 NR1I2O75469 434 aa4.98□□□□□ -1.61
CLTC-209ENST00000498711 BCAR3O75815 825 aa4.98□□□□□ -1.61
CLTC-209ENST00000498711 TCF3P15923 654 aa4.98□□□□□ -1.61
CLTC-209ENST00000498711 SCNN1AP37088 669 aa4.98□□□□□ -1.61
CLTC-209ENST00000498711 RARSP54136 660 aaKnown RBP4.98□□□□□ -1.61
CLTC-209ENST00000498711 VARS2Q5ST30 1063 aaKnown RBP4.98□□□□□ -1.61
CLTC-209ENST00000498711 FAM43AQ8N2R8 423 aa4.98□□□□□ -1.61
CLTC-209ENST00000498711 C14orf93Q9H972 538 aaKnown RBP4.98□□□□□ -1.61
CLTC-209ENST00000498711 PRMT3O60678 531 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 SCUBE3Q8IX30 993 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 MRPL50Q8N5N7 158 aaKnown RBP4.97□□□□□ -1.61
CLTC-209ENST00000498711 PMFBP1Q8TBY8 1022 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 RUNDC1Q96C34 613 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 EVA1BQ9NVM1 165 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 DOLKQ9UPQ8 538 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 FAM135BQ49AJ0 1406 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 CDC42BPGQ6DT37 1551 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 ERBB3P21860 1342 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 ADGRF5Q8IZF2 1346 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 H3BRB1 525 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 ABL1P00519 1130 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 CNGB1Q14028 1251 aaPredicted RBP4.97□□□□□ -1.61
CLTC-209ENST00000498711 MLECQ14165 292 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 ADAM32Q8TC27 787 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 TBC1D32Q96NH3 1257 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 NUDT12Q9BQG2 462 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 ARHGAP9Q9BRR9 750 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 TUT1Q9H6E5 874 aaKnown RBP4.97□□□□□ -1.61
CLTC-209ENST00000498711 CXXC1Q9P0U4 656 aaPredicted RBP4.97□□□□□ -1.61
CLTC-209ENST00000498711 ANKRD26Q9UPS8 1709 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 KIF1AQ12756 1690 aa4.97□□□□□ -1.61
CLTC-209ENST00000498711 FSD2A1L4K1 749 aa4.96□□□□□ -1.61
CLTC-209ENST00000498711 DKK1O94907 266 aa4.96□□□□□ -1.61
CLTC-209ENST00000498711 DDIT3P35638 169 aa4.96□□□□□ -1.61
CLTC-209ENST00000498711 OCLNQ16625 522 aa4.96□□□□□ -1.61
CLTC-209ENST00000498711 MSS51Q4VC12 460 aa4.96□□□□□ -1.61
CLTC-209ENST00000498711 COL22A1Q8NFW1 1626 aaPredicted RBP4.96□□□□□ -1.62
CLTC-209ENST00000498711 CENPJQ9HC77 1338 aaPredicted RBP4.96□□□□□ -1.62
CLTC-209ENST00000498711 ARHGEF28Q8N1W1 1705 aaKnown RBP4.96□□□□□ -1.62
CLTC-209ENST00000498711 MED1Q15648 1581 aaPredicted RBP4.96□□□□□ -1.62
CLTC-209ENST00000498711 TECPR2O15040 1411 aa4.96□□□□□ -1.62
CLTC-209ENST00000498711 RIMS2Q9UQ26 1411 aa4.96□□□□□ -1.62
CLTC-209ENST00000498711 FRAT2O75474 233 aaPredicted RBP4.96□□□□□ -1.62
CLTC-209ENST00000498711 VAMP1P23763 118 aa4.96□□□□□ -1.62
CLTC-209ENST00000498711 SEC13P55735 322 aa4.96□□□□□ -1.62
CLTC-209ENST00000498711 TAS1R3Q7RTX0 852 aa4.96□□□□□ -1.62
CLTC-209ENST00000498711 PCDHB3Q9Y5E6 796 aa4.96□□□□□ -1.62
CLTC-209ENST00000498711 DLC1Q96QB1 1528 aa4.96□□□□□ -1.62
CLTC-209ENST00000498711 IL16Q14005 1332 aa4.96□□□□□ -1.62
CLTC-209ENST00000498711 TULP4Q9NRJ4 1543 aa4.96□□□□□ -1.62
CLTC-209ENST00000498711 DXOO77932 396 aaKnown RBP4.96□□□□□ -1.62
CLTC-209ENST00000498711 HDAC1Q13547 482 aaPredicted RBP4.96□□□□□ -1.62
CLTC-209ENST00000498711 GGT6Q6P531 493 aa4.96□□□□□ -1.62
CLTC-209ENST00000498711 ZBTB33Q86T24 672 aa4.96□□□□□ -1.62
CLTC-209ENST00000498711 GLYCTKQ8IVS8 523 aa4.96□□□□□ -1.62
CLTC-209ENST00000498711 KIAA1024Q9UPX6 916 aa4.96□□□□□ -1.62
CLTC-209ENST00000498711 GTF2IP78347 998 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 ZNF211Q13398 564 aaPredicted RBP4.95□□□□□ -1.62
CLTC-209ENST00000498711 PLEKHF1Q96S99 279 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 ADAMTS13Q76LX8 1427 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 ICMTO60725 284 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 MAPK1P28482 360 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 CEBPAP49715 358 aaPredicted RBP4.95□□□□□ -1.62
CLTC-209ENST00000498711 APLP1P51693 650 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 PPP4CP60510 307 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 TSGA10IPQ3SY00 556 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 OXLD1Q5BKU9 147 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 DZIP3Q86Y13 1208 aaKnown RBP4.95□□□□□ -1.62
CLTC-209ENST00000498711 BRPF3Q9ULD4 1205 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 EID1Q9Y6B2 187 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms