RNA–Protein interactions for RNA: ENST00000498539.1

LRCH4-210, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 3

Gene LRCH4, Length 819 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-210ENST00000498539 RNF123Q5XPI4 1314 aa20.73■□□□□ 0.91
LRCH4-210ENST00000498539 IQCA1LA6NCM1 817 aa20.72■□□□□ 0.91
LRCH4-210ENST00000498539 EIF2S2P20042 333 aaKnown RBP20.72■□□□□ 0.91
LRCH4-210ENST00000498539 RIPK4P57078 832 aa20.72■□□□□ 0.91
LRCH4-210ENST00000498539 PDIA6Q15084 440 aa20.72■□□□□ 0.91
LRCH4-210ENST00000498539 EAPPQ56P03 285 aaPredicted RBP20.72■□□□□ 0.91
LRCH4-210ENST00000498539 RPGRQ92834 1020 aaKnown RBP20.72■□□□□ 0.91
LRCH4-210ENST00000498539 MKRN1Q9UHC7 482 aaKnown RBP20.72■□□□□ 0.91
LRCH4-210ENST00000498539 ERBB4Q15303 1308 aa20.72■□□□□ 0.91
LRCH4-210ENST00000498539 TCERG1O14776 1098 aaKnown RBP20.71■□□□□ 0.91
LRCH4-210ENST00000498539 GIGYF2Q6Y7W6 1299 aaKnown RBP20.71■□□□□ 0.91
LRCH4-210ENST00000498539 LDHDQ86WU2 507 aa20.71■□□□□ 0.91
LRCH4-210ENST00000498539 CCDC146Q8IYE0 955 aa20.71■□□□□ 0.91
LRCH4-210ENST00000498539 NECTIN2Q92692 538 aa20.71■□□□□ 0.91
LRCH4-210ENST00000498539 FZD9O00144 591 aa20.7■□□□□ 0.9
LRCH4-210ENST00000498539 HOXA10P31260 410 aaPredicted RBP20.7■□□□□ 0.9
LRCH4-210ENST00000498539 TMPOP42166 694 aaKnown RBP20.7■□□□□ 0.9
LRCH4-210ENST00000498539 PNNQ9H307 717 aaKnown RBP20.7■□□□□ 0.9
LRCH4-210ENST00000498539 CREBZFQ9NS37 354 aa20.7■□□□□ 0.9
LRCH4-210ENST00000498539 PASKQ96RG2 1323 aa20.7■□□□□ 0.9
LRCH4-210ENST00000498539 KRT24Q2M2I5 525 aa20.69■□□□□ 0.9
LRCH4-210ENST00000498539 PSMD1Q99460 953 aa20.69■□□□□ 0.9
LRCH4-210ENST00000498539 HACL1Q9UJ83 578 aa20.69■□□□□ 0.9
LRCH4-210ENST00000498539 TAF1P21675 1872 aa20.69■□□□□ 0.9
LRCH4-210ENST00000498539 PPEF1O14829 653 aaPredicted RBP20.68■□□□□ 0.9
LRCH4-210ENST00000498539 EPHX2P34913 555 aa20.68■□□□□ 0.9
LRCH4-210ENST00000498539 RALBP1Q15311 655 aa20.68■□□□□ 0.9
LRCH4-210ENST00000498539 ITGBL1O95965 494 aaPredicted RBP20.66■□□□□ 0.9
LRCH4-210ENST00000498539 NEUROD2Q15784 382 aa20.66■□□□□ 0.9
LRCH4-210ENST00000498539 ZNF428Q96B54 188 aa20.66■□□□□ 0.9
LRCH4-210ENST00000498539 CLEC11AQ9Y240 323 aa20.66■□□□□ 0.9
LRCH4-210ENST00000498539 GJA3Q9Y6H8 435 aa20.66■□□□□ 0.9
LRCH4-210ENST00000498539 CNTNAP1P78357 1384 aa20.66■□□□□ 0.9
LRCH4-210ENST00000498539 DDX60Q8IY21 1712 aaKnown RBP20.66■□□□□ 0.9
LRCH4-210ENST00000498539 ABCC4O15439 1325 aa20.65■□□□□ 0.9
LRCH4-210ENST00000498539 MYBBP1AQ9BQG0 1328 aaKnown RBP20.65■□□□□ 0.9
LRCH4-210ENST00000498539 CAPN15O75808 1086 aa20.65■□□□□ 0.9
LRCH4-210ENST00000498539 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
LRCH4-210ENST00000498539 MAP1SQ66K74 1059 aaPredicted RBP20.65■□□□□ 0.9
LRCH4-210ENST00000498539 GPC2Q8N158 579 aa20.65■□□□□ 0.9
LRCH4-210ENST00000498539 XAGE3Q8WTP9 111 aa20.65■□□□□ 0.9
LRCH4-210ENST00000498539 RBM17Q96I25 401 aaKnown RBP20.65■□□□□ 0.9
LRCH4-210ENST00000498539 CRAMP1Q96RY5 1269 aa20.65■□□□□ 0.9
LRCH4-210ENST00000498539 AIMP1Q12904 312 aaKnown RBP20.64■□□□□ 0.89
LRCH4-210ENST00000498539 PARP10Q53GL7 1025 aa20.64■□□□□ 0.89
LRCH4-210ENST00000498539 CC2D2BQ6DHV5 1058 aa20.64■□□□□ 0.89
LRCH4-210ENST00000498539 PPP1R42Q7Z4L9 355 aa20.64■□□□□ 0.89
LRCH4-210ENST00000498539 TNS4Q8IZW8 715 aa20.64■□□□□ 0.89
LRCH4-210ENST00000498539 JDP2Q8WYK2 163 aa20.64■□□□□ 0.89
LRCH4-210ENST00000498539 LMOD3Q0VAK6 560 aa20.63■□□□□ 0.89
LRCH4-210ENST00000498539 COPS6Q7L5N1 327 aa20.63■□□□□ 0.89
LRCH4-210ENST00000498539 LARGE2Q8N3Y3 721 aa20.63■□□□□ 0.89
LRCH4-210ENST00000498539 UTP14AQ9BVJ6 771 aaKnown RBP20.63■□□□□ 0.89
LRCH4-210ENST00000498539 COL4A1P02462 1669 aa20.63■□□□□ 0.89
LRCH4-210ENST00000498539 TRIM35Q9UPQ4 493 aa20.62■□□□□ 0.89
LRCH4-210ENST00000498539 DUOX1Q9NRD9 1551 aa20.62■□□□□ 0.89
LRCH4-210ENST00000498539 LRRC37AA6NMS7 1700 aa20.61■□□□□ 0.89
LRCH4-210ENST00000498539 HCLS1P14317 486 aaPredicted RBP20.61■□□□□ 0.89
LRCH4-210ENST00000498539 SCNN1DP51172 638 aa20.61■□□□□ 0.89
LRCH4-210ENST00000498539 EIF6P56537 245 aaKnown RBP20.61■□□□□ 0.89
LRCH4-210ENST00000498539 AOC3Q16853 763 aa20.61■□□□□ 0.89
LRCH4-210ENST00000498539 NLRP10Q86W26 655 aa20.61■□□□□ 0.89
LRCH4-210ENST00000498539 NLRP3Q96P20 1036 aa20.61■□□□□ 0.89
LRCH4-210ENST00000498539 BABAM1Q9NWV8 329 aa20.61■□□□□ 0.89
LRCH4-210ENST00000498539 LAS1LQ9Y4W2 734 aaKnown RBP20.61■□□□□ 0.89
LRCH4-210ENST00000498539 TMEM88BA6NKF7 163 aa20.6■□□□□ 0.89
LRCH4-210ENST00000498539 PPIP5K2O43314 1243 aa20.6■□□□□ 0.89
LRCH4-210ENST00000498539 CHPF2Q9P2E5 772 aa20.6■□□□□ 0.89
LRCH4-210ENST00000498539 EPS15P42566 896 aa20.59■□□□□ 0.89
LRCH4-210ENST00000498539 VEGFBP49765 207 aa20.59■□□□□ 0.89
LRCH4-210ENST00000498539 FMR1Q06787 632 aaKnown RBP eCLIP20.59■□□□□ 0.89
LRCH4-210ENST00000498539 SLC10A5Q5PT55 438 aa20.59■□□□□ 0.89
LRCH4-210ENST00000498539 NIM1KQ8IY84 436 aa20.59■□□□□ 0.89
LRCH4-210ENST00000498539 CNTROBQ8N137 903 aa20.59■□□□□ 0.89
LRCH4-210ENST00000498539 ATP6V0A2Q9Y487 856 aa20.59■□□□□ 0.89
LRCH4-210ENST00000498539 TRPM7Q96QT4 1865 aa20.58■□□□□ 0.89
LRCH4-210ENST00000498539 CHL1O00533 1208 aa20.58■□□□□ 0.89
LRCH4-210ENST00000498539 FOXN1O15353 648 aa20.58■□□□□ 0.89
LRCH4-210ENST00000498539 PNMA8AQ86V59 439 aaPredicted RBP20.58■□□□□ 0.89
LRCH4-210ENST00000498539 RUNDC1Q96C34 613 aa20.58■□□□□ 0.89
LRCH4-210ENST00000498539 DDX21Q9NR30 783 aaKnown RBP eCLIP20.58■□□□□ 0.89
LRCH4-210ENST00000498539 WDR43Q15061 677 aaKnown RBP eCLIP20.57■□□□□ 0.88
LRCH4-210ENST00000498539 THSD7BQ9C0I4 1608 aa20.56■□□□□ 0.88
LRCH4-210ENST00000498539 LMOD1P29536 600 aaPredicted RBP20.56■□□□□ 0.88
LRCH4-210ENST00000498539 TCIRG1Q13488 830 aa20.56■□□□□ 0.88
LRCH4-210ENST00000498539 HSP90AB3PQ58FF7 597 aa20.56■□□□□ 0.88
LRCH4-210ENST00000498539 HDGFL1Q5TGJ6 251 aa20.56■□□□□ 0.88
LRCH4-210ENST00000498539 TRMT112Q9UI30 125 aaKnown RBP20.56■□□□□ 0.88
LRCH4-210ENST00000498539 ADAMTS8Q9UP79 889 aa20.56■□□□□ 0.88
LRCH4-210ENST00000498539 GRIPAP1Q4V328 841 aa20.55■□□□□ 0.88
LRCH4-210ENST00000498539 SH3TC1Q8TE82 1336 aa20.54■□□□□ 0.88
LRCH4-210ENST00000498539 TRAF5O00463 557 aa20.53■□□□□ 0.88
LRCH4-210ENST00000498539 DPP8Q6V1X1 898 aaPredicted RBP20.53■□□□□ 0.88
LRCH4-210ENST00000498539 RTFDC1Q9BY42 306 aaPredicted RBP20.53■□□□□ 0.88
LRCH4-210ENST00000498539 RASSF10A6NK89 507 aa20.52■□□□□ 0.88
LRCH4-210ENST00000498539 ATP5J2-PTCD1G3V325 749 aa20.52■□□□□ 0.88
LRCH4-210ENST00000498539 CXCL9Q07325 125 aa20.52■□□□□ 0.88
LRCH4-210ENST00000498539 GRAPQ13588 217 aa20.52■□□□□ 0.88
LRCH4-210ENST00000498539 DDX46Q7L014 1031 aaKnown RBP20.52■□□□□ 0.88
LRCH4-210ENST00000498539 GRAPLQ8TC17 118 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms