RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 IARSP41252 1262 aaKnown RBP15.83■□□□□ 0.12
CNOT4-211ENST00000498534 CRY2Q49AN0 593 aa15.83■□□□□ 0.12
CNOT4-211ENST00000498534 GRIPAP1Q4V328 841 aa15.83■□□□□ 0.12
CNOT4-211ENST00000498534 OLFM4Q6UX06 510 aa15.83■□□□□ 0.12
CNOT4-211ENST00000498534 ZBTB3Q9H5J0 574 aa15.83■□□□□ 0.12
CNOT4-211ENST00000498534 TSPYL4Q9UJ04 414 aa15.83■□□□□ 0.12
CNOT4-211ENST00000498534 HACL1Q9UJ83 578 aa15.83■□□□□ 0.12
CNOT4-211ENST00000498534 CLEC11AQ9Y240 323 aa15.83■□□□□ 0.12
CNOT4-211ENST00000498534 EAPPQ56P03 285 aaPredicted RBP15.82■□□□□ 0.12
CNOT4-211ENST00000498534 PPP1R42Q7Z4L9 355 aa15.82■□□□□ 0.12
CNOT4-211ENST00000498534 RBM17Q96I25 401 aaKnown RBP15.82■□□□□ 0.12
CNOT4-211ENST00000498534 PSMD1Q99460 953 aa15.82■□□□□ 0.12
CNOT4-211ENST00000498534 TMX4Q9H1E5 349 aaPredicted RBP15.82■□□□□ 0.12
CNOT4-211ENST00000498534 ERBB4Q15303 1308 aa15.82■□□□□ 0.12
CNOT4-211ENST00000498534 DLG5Q8TDM6 1919 aa15.82■□□□□ 0.12
CNOT4-211ENST00000498534 HSPA1AP0DMV8 641 aaKnown RBP15.81■□□□□ 0.12
CNOT4-211ENST00000498534 HSPA1BP0DMV9 641 aaKnown RBP15.81■□□□□ 0.12
CNOT4-211ENST00000498534 HOXA10P31260 410 aaPredicted RBP15.81■□□□□ 0.12
CNOT4-211ENST00000498534 RIPK4P57078 832 aa15.81■□□□□ 0.12
CNOT4-211ENST00000498534 RALBP1Q15311 655 aa15.81■□□□□ 0.12
CNOT4-211ENST00000498534 SUSD4Q5VX71 490 aa15.81■□□□□ 0.12
CNOT4-211ENST00000498534 GIGYF2Q6Y7W6 1299 aaKnown RBP15.81■□□□□ 0.12
CNOT4-211ENST00000498534 PNMA8AQ86V59 439 aaPredicted RBP15.81■□□□□ 0.12
CNOT4-211ENST00000498534 TNS4Q8IZW8 715 aa15.81■□□□□ 0.12
CNOT4-211ENST00000498534 FZD9O00144 591 aa15.8■□□□□ 0.12
CNOT4-211ENST00000498534 EIF2S2P20042 333 aaKnown RBP15.8■□□□□ 0.12
CNOT4-211ENST00000498534 EPHX2P34913 555 aa15.8■□□□□ 0.12
CNOT4-211ENST00000498534 EIF6P56537 245 aaKnown RBP15.8■□□□□ 0.12
CNOT4-211ENST00000498534 PARP10Q53GL7 1025 aa15.8■□□□□ 0.12
CNOT4-211ENST00000498534 ZNF34Q8IZ26 560 aa15.8■□□□□ 0.12
CNOT4-211ENST00000498534 GPC2Q8N158 579 aa15.8■□□□□ 0.12
CNOT4-211ENST00000498534 CRAMP1Q96RY5 1269 aa15.8■□□□□ 0.12
CNOT4-211ENST00000498534 BABAM1Q9NWV8 329 aa15.8■□□□□ 0.12
CNOT4-211ENST00000498534 MKRN1Q9UHC7 482 aaKnown RBP15.8■□□□□ 0.12
CNOT4-211ENST00000498534 SCN4AP35499 1836 aa15.8■□□□□ 0.12
CNOT4-211ENST00000498534 NUP98P52948 1817 aa15.8■□□□□ 0.12
CNOT4-211ENST00000498534 LAMB4A4D0S4 1761 aa15.8■□□□□ 0.12
CNOT4-211ENST00000498534 ZNF541Q9H0D2 1346 aa15.79■□□□□ 0.12
CNOT4-211ENST00000498534 LMOD3Q0VAK6 560 aa15.79■□□□□ 0.12
CNOT4-211ENST00000498534 NLRP3Q96P20 1036 aa15.79■□□□□ 0.12
CNOT4-211ENST00000498534 KDM3BQ7LBC6 1761 aa15.79■□□□□ 0.12
CNOT4-211ENST00000498534 IBTKQ9P2D0 1353 aaPredicted RBP15.78■□□□□ 0.12
CNOT4-211ENST00000498534 UBN2Q6ZU65 1347 aa15.78■□□□□ 0.12
CNOT4-211ENST00000498534 ABCC12Q96J65 1359 aa15.77■□□□□ 0.12
CNOT4-211ENST00000498534 PASKQ96RG2 1323 aa15.77■□□□□ 0.12
CNOT4-211ENST00000498534 TMEM88BA6NKF7 163 aa15.77■□□□□ 0.12
CNOT4-211ENST00000498534 TCERG1O14776 1098 aaKnown RBP15.77■□□□□ 0.12
CNOT4-211ENST00000498534 ITGBL1O95965 494 aaPredicted RBP15.77■□□□□ 0.12
CNOT4-211ENST00000498534 LARGE2Q8N3Y3 721 aa15.77■□□□□ 0.12
CNOT4-211ENST00000498534 UTP14AQ9BVJ6 771 aaKnown RBP15.77■□□□□ 0.12
CNOT4-211ENST00000498534 GJA3Q9Y6H8 435 aa15.77■□□□□ 0.12
CNOT4-211ENST00000498534 RNF123Q5XPI4 1314 aa15.76■□□□□ 0.11
CNOT4-211ENST00000498534 PPEF1O14829 653 aaPredicted RBP15.76■□□□□ 0.11
CNOT4-211ENST00000498534 NTSR2O95665 410 aa15.76■□□□□ 0.11
CNOT4-211ENST00000498534 LMOD1P29536 600 aaPredicted RBP15.76■□□□□ 0.11
CNOT4-211ENST00000498534 TMPOP42166 694 aaKnown RBP15.76■□□□□ 0.11
CNOT4-211ENST00000498534 SLC10A5Q5PT55 438 aa15.76■□□□□ 0.11
CNOT4-211ENST00000498534 CNTROBQ8N137 903 aa15.76■□□□□ 0.11
CNOT4-211ENST00000498534 RIC1Q4ADV7 1423 aa15.76■□□□□ 0.11
CNOT4-211ENST00000498534 PDIA6Q15084 440 aa15.75■□□□□ 0.11
CNOT4-211ENST00000498534 HSP90AB3PQ58FF7 597 aa15.75■□□□□ 0.11
CNOT4-211ENST00000498534 AIMP1Q12904 312 aaKnown RBP15.74■□□□□ 0.11
CNOT4-211ENST00000498534 NEUROD2Q15784 382 aa15.74■□□□□ 0.11
CNOT4-211ENST00000498534 COPS6Q7L5N1 327 aa15.74■□□□□ 0.11
CNOT4-211ENST00000498534 VPS33BQ9H267 617 aa15.74■□□□□ 0.11
CNOT4-211ENST00000498534 CNTNAP1P78357 1384 aa15.74■□□□□ 0.11
CNOT4-211ENST00000498534 BBOX1O75936 387 aa15.73■□□□□ 0.11
CNOT4-211ENST00000498534 MAP1SQ66K74 1059 aaPredicted RBP15.73■□□□□ 0.11
CNOT4-211ENST00000498534 LRP10Q7Z4F1 713 aa15.73■□□□□ 0.11
CNOT4-211ENST00000498534 NIM1KQ8IY84 436 aa15.73■□□□□ 0.11
CNOT4-211ENST00000498534 NECTIN2Q92692 538 aa15.73■□□□□ 0.11
CNOT4-211ENST00000498534 ATP6V0A2Q9Y487 856 aa15.73■□□□□ 0.11
CNOT4-211ENST00000498534 PPIP5K2O43314 1243 aa15.72■□□□□ 0.11
CNOT4-211ENST00000498534 ANXA1P04083 346 aa15.72■□□□□ 0.11
CNOT4-211ENST00000498534 PROSER3Q2NL68 480 aa15.72■□□□□ 0.11
CNOT4-211ENST00000498534 C3orf67Q6ZVT6 689 aa15.72■□□□□ 0.11
CNOT4-211ENST00000498534 SUPT20HQ8NEM7 779 aa15.72■□□□□ 0.11
CNOT4-211ENST00000498534 AIDAQ96BJ3 306 aa15.72■□□□□ 0.11
CNOT4-211ENST00000498534 LAS1LQ9Y4W2 734 aaKnown RBP15.72■□□□□ 0.11
CNOT4-211ENST00000498534 SNED1Q8TER0 1413 aa15.71■□□□□ 0.11
CNOT4-211ENST00000498534 VEGFBP49765 207 aa15.71■□□□□ 0.11
CNOT4-211ENST00000498534 DDX10Q13206 875 aaKnown RBP15.71■□□□□ 0.11
CNOT4-211ENST00000498534 TCIRG1Q13488 830 aa15.71■□□□□ 0.11
CNOT4-211ENST00000498534 WDR43Q15061 677 aaKnown RBP eCLIP15.71■□□□□ 0.11
CNOT4-211ENST00000498534 DEFB115Q30KQ5 88 aa15.71■□□□□ 0.11
CNOT4-211ENST00000498534 DDX46Q7L014 1031 aaKnown RBP15.71■□□□□ 0.11
CNOT4-211ENST00000498534 XAGE3Q8WTP9 111 aa15.71■□□□□ 0.11
CNOT4-211ENST00000498534 DDX21Q9NR30 783 aaKnown RBP eCLIP15.71■□□□□ 0.11
CNOT4-211ENST00000498534 TRMT112Q9UI30 125 aaKnown RBP15.71■□□□□ 0.11
CNOT4-211ENST00000498534 CHL1O00533 1208 aa15.7■□□□□ 0.1
CNOT4-211ENST00000498534 EPS15P42566 896 aa15.7■□□□□ 0.1
CNOT4-211ENST00000498534 USP50Q70EL3 339 aaPredicted RBP15.7■□□□□ 0.1
CNOT4-211ENST00000498534 NLRP10Q86W26 655 aa15.7■□□□□ 0.1
CNOT4-211ENST00000498534 SP8Q8IXZ3 490 aa15.7■□□□□ 0.1
CNOT4-211ENST00000498534 CCDC146Q8IYE0 955 aa15.7■□□□□ 0.1
CNOT4-211ENST00000498534 RUNDC1Q96C34 613 aa15.7■□□□□ 0.1
CNOT4-211ENST00000498534 MYBBP1AQ9BQG0 1328 aaKnown RBP15.69■□□□□ 0.1
CNOT4-211ENST00000498534 HCLS1P14317 486 aaPredicted RBP15.69■□□□□ 0.1
CNOT4-211ENST00000498534 AOC3Q16853 763 aa15.69■□□□□ 0.1
CNOT4-211ENST00000498534 DPP8Q6V1X1 898 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms