RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 TREML1Q86YW5 311 aa9.11□□□□□ -0.95
PMPCB-208ENST00000498530 NIFKQ9BYG3 293 aaKnown RBP9.11□□□□□ -0.95
PMPCB-208ENST00000498530 DDX41Q9UJV9 622 aaKnown RBP9.11□□□□□ -0.95
PMPCB-208ENST00000498530 HCN4Q9Y3Q4 1203 aa9.11□□□□□ -0.95
PMPCB-208ENST00000498530 GIPC1O14908 333 aa9.1□□□□□ -0.95
PMPCB-208ENST00000498530 ATP2B1P20020 1258 aa9.1□□□□□ -0.95
PMPCB-208ENST00000498530 PTGIRP43119 386 aa9.1□□□□□ -0.95
PMPCB-208ENST00000498530 NOP9Q86U38 636 aaKnown RBP9.1□□□□□ -0.95
PMPCB-208ENST00000498530 RHBDD1Q8TEB9 315 aa9.1□□□□□ -0.95
PMPCB-208ENST00000498530 NUDT16Q96DE0 195 aaKnown RBP9.1□□□□□ -0.95
PMPCB-208ENST00000498530 CPNE3O75131 537 aaKnown RBP9.09□□□□□ -0.95
PMPCB-208ENST00000498530 EIF4BP23588 611 aaKnown RBP9.09□□□□□ -0.95
PMPCB-208ENST00000498530 IER5Q5VY09 327 aa9.09□□□□□ -0.95
PMPCB-208ENST00000498530 ZNF654Q8IZM8 581 aa9.09□□□□□ -0.95
PMPCB-208ENST00000498530 GPC6Q9Y625 555 aaPredicted RBP9.09□□□□□ -0.95
PMPCB-208ENST00000498530 GIMAP6Q6P9H5 292 aa9.08□□□□□ -0.96
PMPCB-208ENST00000498530 GPR152Q8TDT2 470 aa9.08□□□□□ -0.96
PMPCB-208ENST00000498530 MRGPRX2Q96LB1 330 aa9.08□□□□□ -0.96
PMPCB-208ENST00000498530 ZSCAN10Q96SZ4 725 aaPredicted RBP9.08□□□□□ -0.96
PMPCB-208ENST00000498530 LNPKQ9C0E8 428 aa9.08□□□□□ -0.96
PMPCB-208ENST00000498530 GGNBP2Q9H3C7 697 aa9.08□□□□□ -0.96
PMPCB-208ENST00000498530 BCS1LQ9Y276 419 aa9.08□□□□□ -0.96
PMPCB-208ENST00000498530 TGFBR3LH3BV60 316 aa9.07□□□□□ -0.96
PMPCB-208ENST00000498530 TERTO14746 1132 aaKnown RBP9.07□□□□□ -0.96
PMPCB-208ENST00000498530 OPLAHO14841 1288 aa9.07□□□□□ -0.96
PMPCB-208ENST00000498530 SNRPBP14678 240 aaKnown RBP9.07□□□□□ -0.96
PMPCB-208ENST00000498530 NLRP3Q96P20 1036 aa9.07□□□□□ -0.96
PMPCB-208ENST00000498530 DNAJC2Q99543 621 aaKnown RBP9.07□□□□□ -0.96
PMPCB-208ENST00000498530 C12orf49Q9H741 205 aa9.07□□□□□ -0.96
PMPCB-208ENST00000498530 USP31Q70CQ4 1352 aa9.07□□□□□ -0.96
PMPCB-208ENST00000498530 LOC100996750A0A140TA64 210 aa9.06□□□□□ -0.96
PMPCB-208ENST00000498530 GPC1P35052 558 aa9.06□□□□□ -0.96
PMPCB-208ENST00000498530 TNNI2P48788 182 aa9.06□□□□□ -0.96
PMPCB-208ENST00000498530 ST13P50502 369 aaKnown RBP9.06□□□□□ -0.96
PMPCB-208ENST00000498530 NNTQ13423 1086 aa9.06□□□□□ -0.96
PMPCB-208ENST00000498530 XKR5Q6UX68 686 aa9.06□□□□□ -0.96
PMPCB-208ENST00000498530 HS2ST1Q7LGA3 356 aa9.06□□□□□ -0.96
PMPCB-208ENST00000498530 KRTAP4-6Q9BYQ5 205 aa9.06□□□□□ -0.96
PMPCB-208ENST00000498530 ATP13A2Q9NQ11 1180 aa9.06□□□□□ -0.96
PMPCB-208ENST00000498530 ZDHHC3Q9NYG2 299 aa9.06□□□□□ -0.96
PMPCB-208ENST00000498530 PARP3Q9Y6F1 533 aa9.06□□□□□ -0.96
PMPCB-208ENST00000498530 MICAL2O94851 1124 aa9.05□□□□□ -0.96
PMPCB-208ENST00000498530 RACK1P63244 317 aaKnown RBP9.05□□□□□ -0.96
PMPCB-208ENST00000498530 ARID5AQ03989 594 aa9.05□□□□□ -0.96
PMPCB-208ENST00000498530 RBL2Q08999 1139 aa9.05□□□□□ -0.96
PMPCB-208ENST00000498530 CBLBQ13191 982 aa9.05□□□□□ -0.96
PMPCB-208ENST00000498530 USP48Q86UV5 1035 aa9.05□□□□□ -0.96
PMPCB-208ENST00000498530 TTC16Q8NEE8 873 aa9.05□□□□□ -0.96
PMPCB-208ENST00000498530 SNX29Q8TEQ0 813 aa9.05□□□□□ -0.96
PMPCB-208ENST00000498530 C7orf43Q8WVR3 580 aa9.05□□□□□ -0.96
PMPCB-208ENST00000498530 DHX38Q92620 1227 aaKnown RBP9.05□□□□□ -0.96
PMPCB-208ENST00000498530 SRCIN1Q9C0H9 1055 aa9.05□□□□□ -0.96
PMPCB-208ENST00000498530 SRA1Q9HD15 236 aaKnown RBP9.05□□□□□ -0.96
PMPCB-208ENST00000498530 INPP5FQ9Y2H2 1132 aa9.05□□□□□ -0.96
PMPCB-208ENST00000498530 MEN1O00255 615 aa9.04□□□□□ -0.96
PMPCB-208ENST00000498530 NCLP19338 710 aaKnown RBP9.04□□□□□ -0.96
PMPCB-208ENST00000498530 GTF2E1P29083 439 aaPredicted RBP9.04□□□□□ -0.96
PMPCB-208ENST00000498530 TXLNAP40222 546 aa9.04□□□□□ -0.96
PMPCB-208ENST00000498530 C8orf34Q49A92 452 aa9.04□□□□□ -0.96
PMPCB-208ENST00000498530 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.04□□□□□ -0.96
PMPCB-208ENST00000498530 ZNF394Q53GI3 561 aa9.04□□□□□ -0.96
PMPCB-208ENST00000498530 KLF16Q9BXK1 252 aaPredicted RBP9.04□□□□□ -0.96
PMPCB-208ENST00000498530 DMGDHQ9UI17 866 aaKnown RBP9.04□□□□□ -0.96
PMPCB-208ENST00000498530 TTC24A2A3L6 582 aaPredicted RBP9.03□□□□□ -0.96
PMPCB-208ENST00000498530 TNFRSF21O75509 655 aa9.03□□□□□ -0.96
PMPCB-208ENST00000498530 SMPD1P17405 629 aa9.03□□□□□ -0.96
PMPCB-208ENST00000498530 DNAJA1P31689 397 aaKnown RBP9.03□□□□□ -0.96
PMPCB-208ENST00000498530 GTF2F1P35269 517 aaKnown RBP eCLIP9.03□□□□□ -0.96
PMPCB-208ENST00000498530 GJA8P48165 433 aa9.03□□□□□ -0.96
PMPCB-208ENST00000498530 SOGA3Q5TF21 947 aa9.03□□□□□ -0.96
PMPCB-208ENST00000498530 PDE12Q6L8Q7 609 aaKnown RBP9.03□□□□□ -0.96
PMPCB-208ENST00000498530 TMEM214Q6NUQ4 689 aaKnown RBP9.03□□□□□ -0.96
PMPCB-208ENST00000498530 RHPN1Q8TCX5 695 aa9.03□□□□□ -0.96
PMPCB-208ENST00000498530 TRIM47Q96LD4 638 aa9.03□□□□□ -0.96
PMPCB-208ENST00000498530 FAM8A1Q9UBU6 413 aa9.03□□□□□ -0.96
PMPCB-208ENST00000498530 GNASQ5JWF2 1037 aa9.02□□□□□ -0.97
PMPCB-208ENST00000498530 NBPF10Q6P3W6 841 aaKnown RBP9.02□□□□□ -0.97
PMPCB-208ENST00000498530 CCDC74AQ96AQ1 378 aa9.02□□□□□ -0.97
PMPCB-208ENST00000498530 ITPKCQ96DU7 683 aa9.02□□□□□ -0.97
PMPCB-208ENST00000498530 GRIP2Q9C0E4 1043 aa9.02□□□□□ -0.97
PMPCB-208ENST00000498530 PCDHGB7Q9Y5F8 929 aa9.02□□□□□ -0.97
PMPCB-208ENST00000498530 A6NHS1 94 aa9.01□□□□□ -0.97
PMPCB-208ENST00000498530 FGRP09769 529 aa9.01□□□□□ -0.97
PMPCB-208ENST00000498530 TAF1CQ15572 869 aaPredicted RBP9.01□□□□□ -0.97
PMPCB-208ENST00000498530 NBPF1Q3BBV0 1214 aa9.01□□□□□ -0.97
PMPCB-208ENST00000498530 HIRIP3Q9BW71 556 aaPredicted RBP9.01□□□□□ -0.97
PMPCB-208ENST00000498530 OSBPL7Q9BZF2 842 aa9.01□□□□□ -0.97
PMPCB-208ENST00000498530 TMA7Q9Y2S6 64 aaKnown RBP9.01□□□□□ -0.97
PMPCB-208ENST00000498530 ALDH1A1P00352 501 aa9□□□□□ -0.97
PMPCB-208ENST00000498530 ERMP1Q7Z2K6 904 aa9□□□□□ -0.97
PMPCB-208ENST00000498530 SUSD3Q96L08 255 aa9□□□□□ -0.97
PMPCB-208ENST00000498530 SENP2Q9HC62 589 aa9□□□□□ -0.97
PMPCB-208ENST00000498530 FNDC3AQ9Y2H6 1198 aaKnown RBP9□□□□□ -0.97
PMPCB-208ENST00000498530 WASF2Q9Y6W5 498 aa9□□□□□ -0.97
PMPCB-208ENST00000498530 SPATA31C2B4DYI2 1134 aa8.99□□□□□ -0.97
PMPCB-208ENST00000498530 ZIC2O95409 532 aaPredicted RBP8.99□□□□□ -0.97
PMPCB-208ENST00000498530 PLA2G4AP47712 749 aa8.99□□□□□ -0.97
PMPCB-208ENST00000498530 IDH3AP50213 366 aa8.99□□□□□ -0.97
PMPCB-208ENST00000498530 RNF144AP50876 292 aaPredicted RBP8.99□□□□□ -0.97
PMPCB-208ENST00000498530 ARSDP51689 593 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms