RNA–Protein interactions for RNA: ENST00000498439.1

CHTF18-213, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 2

Gene CHTF18, Length 673 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-213ENST00000498439 COL13A1Q5TAT6 717 aaPredicted RBP23.9■■□□□ 1.42
CHTF18-213ENST00000498439 TNS4Q8IZW8 715 aa23.9■■□□□ 1.42
CHTF18-213ENST00000498439 CRAMP1Q96RY5 1269 aa23.9■■□□□ 1.42
CHTF18-213ENST00000498439 ZBTB3Q9H5J0 574 aa23.9■■□□□ 1.42
CHTF18-213ENST00000498439 EPHX2P34913 555 aa23.89■■□□□ 1.41
CHTF18-213ENST00000498439 HSP90AB3PQ58FF7 597 aa23.89■■□□□ 1.41
CHTF18-213ENST00000498439 TTLL7Q6ZT98 887 aa23.89■■□□□ 1.41
CHTF18-213ENST00000498439 ZNF34Q8IZ26 560 aa23.89■■□□□ 1.41
CHTF18-213ENST00000498439 VPS33BQ9H267 617 aa23.89■■□□□ 1.41
CHTF18-213ENST00000498439 RIC1Q4ADV7 1423 aa23.89■■□□□ 1.41
CHTF18-213ENST00000498439 GPTP24298 496 aa23.88■■□□□ 1.41
CHTF18-213ENST00000498439 SUSD4Q5VX71 490 aa23.88■■□□□ 1.41
CHTF18-213ENST00000498439 TMEM88BA6NKF7 163 aa23.87■■□□□ 1.41
CHTF18-213ENST00000498439 EIF2S2P20042 333 aaKnown RBP23.87■■□□□ 1.41
CHTF18-213ENST00000498439 LMOD1P29536 600 aaPredicted RBP23.87■■□□□ 1.41
CHTF18-213ENST00000498439 RNF123Q5XPI4 1314 aa23.86■■□□□ 1.41
CHTF18-213ENST00000498439 THUMPD2Q9BTF0 503 aaKnown RBP23.86■■□□□ 1.41
CHTF18-213ENST00000498439 POTEIP0CG38 1075 aa23.85■■□□□ 1.41
CHTF18-213ENST00000498439 POTEJP0CG39 1038 aa23.85■■□□□ 1.41
CHTF18-213ENST00000498439 LARGE2Q8N3Y3 721 aa23.85■■□□□ 1.41
CHTF18-213ENST00000498439 SUPT20HQ8NEM7 779 aa23.85■■□□□ 1.41
CHTF18-213ENST00000498439 UTP14AQ9BVJ6 771 aaKnown RBP23.85■■□□□ 1.41
CHTF18-213ENST00000498439 MKRN1Q9UHC7 482 aaKnown RBP23.85■■□□□ 1.41
CHTF18-213ENST00000498439 PASKQ96RG2 1323 aa23.84■■□□□ 1.41
CHTF18-213ENST00000498439 OLFM4Q6UX06 510 aa23.84■■□□□ 1.41
CHTF18-213ENST00000498439 ZNF541Q9H0D2 1346 aa23.84■■□□□ 1.41
CHTF18-213ENST00000498439 PPEF1O14829 653 aaPredicted RBP23.83■■□□□ 1.41
CHTF18-213ENST00000498439 SLC10A5Q5PT55 438 aa23.83■■□□□ 1.41
CHTF18-213ENST00000498439 NTSR2O95665 410 aa23.82■■□□□ 1.4
CHTF18-213ENST00000498439 TMPOP42166 694 aaKnown RBP23.82■■□□□ 1.4
CHTF18-213ENST00000498439 CNTROBQ8N137 903 aa23.82■■□□□ 1.4
CHTF18-213ENST00000498439 GJA3Q9Y6H8 435 aa23.82■■□□□ 1.4
CHTF18-213ENST00000498439 UBN2Q6ZU65 1347 aa23.82■■□□□ 1.4
CHTF18-213ENST00000498439 ABCC12Q96J65 1359 aa23.81■■□□□ 1.4
CHTF18-213ENST00000498439 BBOX1O75936 387 aa23.81■■□□□ 1.4
CHTF18-213ENST00000498439 ITGBL1O95965 494 aaPredicted RBP23.81■■□□□ 1.4
CHTF18-213ENST00000498439 NIM1KQ8IY84 436 aa23.81■■□□□ 1.4
CHTF18-213ENST00000498439 AIDAQ96BJ3 306 aa23.81■■□□□ 1.4
CHTF18-213ENST00000498439 CNTNAP1P78357 1384 aa23.8■■□□□ 1.4
CHTF18-213ENST00000498439 WDR43Q15061 677 aaKnown RBP eCLIP23.78■■□□□ 1.4
CHTF18-213ENST00000498439 PDIA6Q15084 440 aa23.78■■□□□ 1.4
CHTF18-213ENST00000498439 DEFB115Q30KQ5 88 aa23.78■■□□□ 1.4
CHTF18-213ENST00000498439 USP50Q70EL3 339 aaPredicted RBP23.78■■□□□ 1.4
CHTF18-213ENST00000498439 ATP6V0A2Q9Y487 856 aa23.78■■□□□ 1.4
CHTF18-213ENST00000498439 TCERG1O14776 1098 aaKnown RBP23.77■■□□□ 1.4
CHTF18-213ENST00000498439 PPIP5K2O43314 1243 aa23.77■■□□□ 1.4
CHTF18-213ENST00000498439 AIMP1Q12904 312 aaKnown RBP23.77■■□□□ 1.4
CHTF18-213ENST00000498439 COPS6Q7L5N1 327 aa23.77■■□□□ 1.4
CHTF18-213ENST00000498439 DDX21Q9NR30 783 aaKnown RBP eCLIP23.77■■□□□ 1.4
CHTF18-213ENST00000498439 MYBBP1AQ9BQG0 1328 aaKnown RBP23.77■■□□□ 1.4
CHTF18-213ENST00000498439 TCIRG1Q13488 830 aa23.76■■□□□ 1.39
CHTF18-213ENST00000498439 DDX46Q7L014 1031 aaKnown RBP23.76■■□□□ 1.39
CHTF18-213ENST00000498439 TMC4Q7Z404 712 aa23.76■■□□□ 1.39
CHTF18-213ENST00000498439 SP8Q8IXZ3 490 aa23.76■■□□□ 1.39
CHTF18-213ENST00000498439 NEUROD2Q15784 382 aa23.75■■□□□ 1.39
CHTF18-213ENST00000498439 MAP1SQ66K74 1059 aaPredicted RBP23.75■■□□□ 1.39
CHTF18-213ENST00000498439 RUNDC1Q96C34 613 aa23.75■■□□□ 1.39
CHTF18-213ENST00000498439 TRMT112Q9UI30 125 aaKnown RBP23.75■■□□□ 1.39
CHTF18-213ENST00000498439 LRP10Q7Z4F1 713 aa23.74■■□□□ 1.39
CHTF18-213ENST00000498439 MPNDQ8N594 471 aa23.74■■□□□ 1.39
CHTF18-213ENST00000498439 PRDM10Q9NQV6 1147 aa23.74■■□□□ 1.39
CHTF18-213ENST00000498439 SNED1Q8TER0 1413 aa23.74■■□□□ 1.39
CHTF18-213ENST00000498439 CHL1O00533 1208 aa23.73■■□□□ 1.39
CHTF18-213ENST00000498439 HOXB7P09629 217 aa23.73■■□□□ 1.39
CHTF18-213ENST00000498439 CTCFP49711 727 aaPredicted RBP23.73■■□□□ 1.39
CHTF18-213ENST00000498439 VEGFBP49765 207 aa23.73■■□□□ 1.39
CHTF18-213ENST00000498439 MAP2K1Q02750 393 aaPredicted RBP23.73■■□□□ 1.39
CHTF18-213ENST00000498439 DPP8Q6V1X1 898 aaPredicted RBP23.73■■□□□ 1.39
CHTF18-213ENST00000498439 XAGE3Q8WTP9 111 aa23.73■■□□□ 1.39
CHTF18-213ENST00000498439 ZNRF3Q9ULT6 936 aa23.73■■□□□ 1.39
CHTF18-213ENST00000498439 ABT1Q9ULW3 272 aaKnown RBP23.73■■□□□ 1.39
CHTF18-213ENST00000498439 LAS1LQ9Y4W2 734 aaKnown RBP23.73■■□□□ 1.39
CHTF18-213ENST00000498439 SH3TC1Q8TE82 1336 aa23.73■■□□□ 1.39
CHTF18-213ENST00000498439 RASSF10A6NK89 507 aa23.72■■□□□ 1.39
CHTF18-213ENST00000498439 CAPN15O75808 1086 aa23.72■■□□□ 1.39
CHTF18-213ENST00000498439 NLRP10Q86W26 655 aa23.72■■□□□ 1.39
CHTF18-213ENST00000498439 RTFDC1Q9BY42 306 aaPredicted RBP23.72■■□□□ 1.39
CHTF18-213ENST00000498439 TNIP1Q15025 636 aa23.71■■□□□ 1.39
CHTF18-213ENST00000498439 NECTIN2Q92692 538 aa23.71■■□□□ 1.39
CHTF18-213ENST00000498439 CHMP4AQ9BY43 222 aa23.71■■□□□ 1.39
CHTF18-213ENST00000498439 ADARB2Q9NS39 739 aaKnown RBP23.71■■□□□ 1.39
CHTF18-213ENST00000498439 ABCC4O15439 1325 aa23.7■■□□□ 1.38
CHTF18-213ENST00000498439 ANXA1P04083 346 aa23.7■■□□□ 1.38
CHTF18-213ENST00000498439 HSP90B1P14625 803 aaKnown RBP23.7■■□□□ 1.38
CHTF18-213ENST00000498439 ECE1P42892 770 aa23.7■■□□□ 1.38
CHTF18-213ENST00000498439 DDX10Q13206 875 aaKnown RBP23.7■■□□□ 1.38
CHTF18-213ENST00000498439 GRAPQ13588 217 aa23.7■■□□□ 1.38
CHTF18-213ENST00000498439 AOC3Q16853 763 aa23.7■■□□□ 1.38
CHTF18-213ENST00000498439 GRAPLQ8TC17 118 aaPredicted RBP23.7■■□□□ 1.38
CHTF18-213ENST00000498439 DBF4Q9UBU7 674 aaPredicted RBP23.7■■□□□ 1.38
CHTF18-213ENST00000498439 ADAMTSL1Q8N6G6 1762 aa23.7■■□□□ 1.38
CHTF18-213ENST00000498439 EPS15P42566 896 aa23.69■■□□□ 1.38
CHTF18-213ENST00000498439 SCNN1DP51172 638 aa23.69■■□□□ 1.38
CHTF18-213ENST00000498439 PROSER3Q2NL68 480 aa23.69■■□□□ 1.38
CHTF18-213ENST00000498439 ANKRD13DQ6ZTN6 518 aa23.69■■□□□ 1.38
CHTF18-213ENST00000498439 PLBD2Q8NHP8 589 aa23.69■■□□□ 1.38
CHTF18-213ENST00000498439 HDGFL1Q5TGJ6 251 aa23.68■■□□□ 1.38
CHTF18-213ENST00000498439 CIAPIN1Q6FI81 312 aa23.68■■□□□ 1.38
CHTF18-213ENST00000498439 BEGAINQ9BUH8 593 aa23.68■■□□□ 1.38
CHTF18-213ENST00000498439 BCL2L13Q9BXK5 485 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms