RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 C3orf67Q6ZVT6 689 aa29.55■■■□□ 2.32
CDKN2A-208ENST00000498124 RTKN2Q8IZC4 609 aa29.55■■■□□ 2.32
CDKN2A-208ENST00000498124 ADAMTS8Q9UP79 889 aa29.55■■■□□ 2.32
CDKN2A-208ENST00000498124 ZNF541Q9H0D2 1346 aa29.54■■■□□ 2.32
CDKN2A-208ENST00000498124 SLC51AQ86UW1 340 aa29.54■■■□□ 2.32
CDKN2A-208ENST00000498124 WDR43Q15061 677 aaKnown RBP eCLIP29.53■■■□□ 2.32
CDKN2A-208ENST00000498124 COL4A5P29400 1685 aa29.53■■■□□ 2.32
CDKN2A-208ENST00000498124 ANP32CO43423 234 aa29.52■■■□□ 2.32
CDKN2A-208ENST00000498124 POTEIP0CG38 1075 aa29.52■■■□□ 2.32
CDKN2A-208ENST00000498124 POTEJP0CG39 1038 aa29.52■■■□□ 2.32
CDKN2A-208ENST00000498124 NECTIN2Q92692 538 aa29.52■■■□□ 2.32
CDKN2A-208ENST00000498124 L3MBTL3Q96JM7 780 aaPredicted RBP29.52■■■□□ 2.32
CDKN2A-208ENST00000498124 SCN4AP35499 1836 aa29.51■■■□□ 2.31
CDKN2A-208ENST00000498124 PARP10Q53GL7 1025 aa29.51■■■□□ 2.31
CDKN2A-208ENST00000498124 JMYQ8N9B5 988 aa29.51■■■□□ 2.31
CDKN2A-208ENST00000498124 SYNE4Q8N205 404 aa29.5■■■□□ 2.31
CDKN2A-208ENST00000498124 RPGRQ92834 1020 aaKnown RBP29.5■■■□□ 2.31
CDKN2A-208ENST00000498124 PSMD1Q99460 953 aa29.5■■■□□ 2.31
CDKN2A-208ENST00000498124 IARSP41252 1262 aaKnown RBP29.49■■■□□ 2.31
CDKN2A-208ENST00000498124 COPS6Q7L5N1 327 aa29.49■■■□□ 2.31
CDKN2A-208ENST00000498124 XAGE3Q8WTP9 111 aa29.49■■■□□ 2.31
CDKN2A-208ENST00000498124 LAMB2P55268 1798 aa29.49■■■□□ 2.31
CDKN2A-208ENST00000498124 PPP1R42Q7Z4L9 355 aa29.48■■■□□ 2.31
CDKN2A-208ENST00000498124 IFFO2Q5TF58 517 aa29.47■■■□□ 2.31
CDKN2A-208ENST00000498124 CRAMP1Q96RY5 1269 aa29.47■■■□□ 2.31
CDKN2A-208ENST00000498124 DDX21Q9NR30 783 aaKnown RBP eCLIP29.47■■■□□ 2.31
CDKN2A-208ENST00000498124 FZD9O00144 591 aa29.46■■■□□ 2.31
CDKN2A-208ENST00000498124 SLC10A5Q5PT55 438 aa29.46■■■□□ 2.31
CDKN2A-208ENST00000498124 CC2D2BQ6DHV5 1058 aa29.46■■■□□ 2.31
CDKN2A-208ENST00000498124 CHADLQ6NUI6 762 aa29.46■■■□□ 2.31
CDKN2A-208ENST00000498124 UTP14AQ9BVJ6 771 aaKnown RBP29.46■■■□□ 2.31
CDKN2A-208ENST00000498124 LAS1LQ9Y4W2 734 aaKnown RBP29.46■■■□□ 2.31
CDKN2A-208ENST00000498124 ADAMTSL1Q8N6G6 1762 aa29.46■■■□□ 2.31
CDKN2A-208ENST00000498124 AIMP1Q12904 312 aaKnown RBP29.45■■■□□ 2.31
CDKN2A-208ENST00000498124 TAF1DQ9H5J8 278 aaPredicted RBP29.45■■■□□ 2.31
CDKN2A-208ENST00000498124 CHPF2Q9P2E5 772 aa29.45■■■□□ 2.31
CDKN2A-208ENST00000498124 IQCA1LA6NCM1 817 aa29.44■■■□□ 2.3
CDKN2A-208ENST00000498124 NLRP10Q86W26 655 aa29.44■■■□□ 2.3
CDKN2A-208ENST00000498124 RBM17Q96I25 401 aaKnown RBP29.44■■■□□ 2.3
CDKN2A-208ENST00000498124 RNF123Q5XPI4 1314 aa29.44■■■□□ 2.3
CDKN2A-208ENST00000498124 PPEF1O14829 653 aaPredicted RBP29.43■■■□□ 2.3
CDKN2A-208ENST00000498124 HOXB7P09629 217 aa29.42■■■□□ 2.3
CDKN2A-208ENST00000498124 HSP90AB3PQ58FF7 597 aa29.42■■■□□ 2.3
CDKN2A-208ENST00000498124 TCIRG1Q13488 830 aa29.41■■■□□ 2.3
CDKN2A-208ENST00000498124 HDGFL1Q5TGJ6 251 aa29.41■■■□□ 2.3
CDKN2A-208ENST00000498124 CFAP44Q96MT7 982 aa29.41■■■□□ 2.3
CDKN2A-208ENST00000498124 NLRP3Q96P20 1036 aa29.41■■■□□ 2.3
CDKN2A-208ENST00000498124 ABCC4O15439 1325 aa29.41■■■□□ 2.3
CDKN2A-208ENST00000498124 LTBP1Q14766 1721 aa29.4■■■□□ 2.3
CDKN2A-208ENST00000498124 ZNF853P0CG23 659 aa29.39■■■□□ 2.3
CDKN2A-208ENST00000498124 LDHDQ86WU2 507 aa29.39■■■□□ 2.3
CDKN2A-208ENST00000498124 MBIPQ9NS73 344 aa29.39■■■□□ 2.3
CDKN2A-208ENST00000498124 DDX60Q8IY21 1712 aaKnown RBP29.38■■■□□ 2.29
CDKN2A-208ENST00000498124 TCERG1O14776 1098 aaKnown RBP29.38■■■□□ 2.29
CDKN2A-208ENST00000498124 GRIPAP1Q4V328 841 aa29.38■■■□□ 2.29
CDKN2A-208ENST00000498124 HCLS1P14317 486 aaPredicted RBP29.37■■■□□ 2.29
CDKN2A-208ENST00000498124 GPC2Q8N158 579 aa29.37■■■□□ 2.29
CDKN2A-208ENST00000498124 HACL1Q9UJ83 578 aa29.37■■■□□ 2.29
CDKN2A-208ENST00000498124 PASKQ96RG2 1323 aa29.37■■■□□ 2.29
CDKN2A-208ENST00000498124 APAF1O14727 1248 aa29.36■■■□□ 2.29
CDKN2A-208ENST00000498124 JDP2Q8WYK2 163 aa29.36■■■□□ 2.29
CDKN2A-208ENST00000498124 ATP6V0A2Q9Y487 856 aa29.36■■■□□ 2.29
CDKN2A-208ENST00000498124 DUSP27Q5VZP5 1158 aa29.35■■■□□ 2.29
CDKN2A-208ENST00000498124 PLBD2Q8NHP8 589 aa29.35■■■□□ 2.29
CDKN2A-208ENST00000498124 DBF4Q9UBU7 674 aaPredicted RBP29.35■■■□□ 2.29
CDKN2A-208ENST00000498124 EPHX2P34913 555 aa29.34■■■□□ 2.29
CDKN2A-208ENST00000498124 CREBZFQ9NS37 354 aa29.34■■■□□ 2.29
CDKN2A-208ENST00000498124 TRMT112Q9UI30 125 aaKnown RBP29.34■■■□□ 2.29
CDKN2A-208ENST00000498124 SH3TC1Q8TE82 1336 aa29.34■■■□□ 2.29
CDKN2A-208ENST00000498124 TAF1P21675 1872 aa29.34■■■□□ 2.29
CDKN2A-208ENST00000498124 LARGE2Q8N3Y3 721 aa29.33■■■□□ 2.29
CDKN2A-208ENST00000498124 ZNF428Q96B54 188 aa29.33■■■□□ 2.29
CDKN2A-208ENST00000498124 ISCA1Q9BUE6 129 aa29.33■■■□□ 2.29
CDKN2A-208ENST00000498124 LRRC37AA6NMS7 1700 aa29.32■■■□□ 2.28
CDKN2A-208ENST00000498124 ITGBL1O95965 494 aaPredicted RBP29.32■■■□□ 2.28
CDKN2A-208ENST00000498124 EAPPQ56P03 285 aaPredicted RBP29.32■■■□□ 2.28
CDKN2A-208ENST00000498124 IFT57Q9NWB7 429 aa29.32■■■□□ 2.28
CDKN2A-208ENST00000498124 COL4A1P02462 1669 aa29.31■■■□□ 2.28
CDKN2A-208ENST00000498124 DUOX1Q9NRD9 1551 aa29.31■■■□□ 2.28
CDKN2A-208ENST00000498124 ANKRD13DQ6ZTN6 518 aa29.31■■■□□ 2.28
CDKN2A-208ENST00000498124 EIF6P56537 245 aaKnown RBP29.3■■■□□ 2.28
CDKN2A-208ENST00000498124 RTFDC1Q9BY42 306 aaPredicted RBP29.3■■■□□ 2.28
CDKN2A-208ENST00000498124 SCNN1DP51172 638 aa29.29■■■□□ 2.28
CDKN2A-208ENST00000498124 DIEXFQ68CQ4 756 aaKnown RBP29.29■■■□□ 2.28
CDKN2A-208ENST00000498124 HYPKQ9NX55 129 aa29.29■■■□□ 2.28
CDKN2A-208ENST00000498124 GJA3Q9Y6H8 435 aa29.29■■■□□ 2.28
CDKN2A-208ENST00000498124 PPIP5K2O43314 1243 aa29.28■■■□□ 2.28
CDKN2A-208ENST00000498124 BBOX1O75936 387 aa29.28■■■□□ 2.28
CDKN2A-208ENST00000498124 AOC3Q16853 763 aa29.28■■■□□ 2.28
CDKN2A-208ENST00000498124 CCDC184Q52MB2 194 aa29.28■■■□□ 2.28
CDKN2A-208ENST00000498124 SP8Q8IXZ3 490 aa29.28■■■□□ 2.28
CDKN2A-208ENST00000498124 ATP5J2-PTCD1G3V325 749 aa29.27■■■□□ 2.28
CDKN2A-208ENST00000498124 GRAPQ13588 217 aa29.27■■■□□ 2.28
CDKN2A-208ENST00000498124 PNMA8AQ86V59 439 aaPredicted RBP29.27■■■□□ 2.28
CDKN2A-208ENST00000498124 NIM1KQ8IY84 436 aa29.27■■■□□ 2.28
CDKN2A-208ENST00000498124 GRAPLQ8TC17 118 aaPredicted RBP29.27■■■□□ 2.28
CDKN2A-208ENST00000498124 GNAI1P63096 354 aa29.26■■■□□ 2.27
CDKN2A-208ENST00000498124 DDX46Q7L014 1031 aaKnown RBP29.26■■■□□ 2.27
CDKN2A-208ENST00000498124 FAM89AQ96GI7 184 aa29.25■■■□□ 2.27
CDKN2A-208ENST00000498124 VPS33BQ9H267 617 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms