RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 CHADLQ6NUI6 762 aa24.38■■□□□ 1.49
PRKCB-209ENST00000498058 HOXA10P31260 410 aaPredicted RBP24.37■■□□□ 1.49
PRKCB-209ENST00000498058 KRT24Q2M2I5 525 aa24.37■■□□□ 1.49
PRKCB-209ENST00000498058 MYBBP1AQ9BQG0 1328 aaKnown RBP24.36■■□□□ 1.49
PRKCB-209ENST00000498058 IARSP41252 1262 aaKnown RBP24.36■■□□□ 1.49
PRKCB-209ENST00000498058 NECTIN2Q92692 538 aa24.36■■□□□ 1.49
PRKCB-209ENST00000498058 TAF1DQ9H5J8 278 aaPredicted RBP24.36■■□□□ 1.49
PRKCB-209ENST00000498058 FZD9O00144 591 aa24.35■■□□□ 1.49
PRKCB-209ENST00000498058 NEUROD2Q15784 382 aa24.35■■□□□ 1.49
PRKCB-209ENST00000498058 BABAM1Q9NWV8 329 aa24.35■■□□□ 1.49
PRKCB-209ENST00000498058 TRIM35Q9UPQ4 493 aa24.35■■□□□ 1.49
PRKCB-209ENST00000498058 PSMD1Q99460 953 aa24.34■■□□□ 1.49
PRKCB-209ENST00000498058 COL13A1Q5TAT6 717 aaPredicted RBP24.33■■□□□ 1.49
PRKCB-209ENST00000498058 RPGRQ92834 1020 aaKnown RBP24.33■■□□□ 1.49
PRKCB-209ENST00000498058 ADAMTSL1Q8N6G6 1762 aa24.33■■□□□ 1.49
PRKCB-209ENST00000498058 LAMB2P55268 1798 aa24.32■■□□□ 1.48
PRKCB-209ENST00000498058 ANKRD36CQ5JPF3 1778 aa24.32■■□□□ 1.48
PRKCB-209ENST00000498058 CHL1O00533 1208 aa24.32■■□□□ 1.48
PRKCB-209ENST00000498058 CRAMP1Q96RY5 1269 aa24.32■■□□□ 1.48
PRKCB-209ENST00000498058 IQCA1LA6NCM1 817 aa24.31■■□□□ 1.48
PRKCB-209ENST00000498058 TCERG1O14776 1098 aaKnown RBP24.31■■□□□ 1.48
PRKCB-209ENST00000498058 LMOD3Q0VAK6 560 aa24.31■■□□□ 1.48
PRKCB-209ENST00000498058 COPS6Q7L5N1 327 aa24.31■■□□□ 1.48
PRKCB-209ENST00000498058 XAGE3Q8WTP9 111 aa24.31■■□□□ 1.48
PRKCB-209ENST00000498058 PASKQ96RG2 1323 aa24.31■■□□□ 1.48
PRKCB-209ENST00000498058 PARP10Q53GL7 1025 aa24.3■■□□□ 1.48
PRKCB-209ENST00000498058 SLC10A5Q5PT55 438 aa24.3■■□□□ 1.48
PRKCB-209ENST00000498058 PPP1R42Q7Z4L9 355 aa24.3■■□□□ 1.48
PRKCB-209ENST00000498058 LDHDQ86WU2 507 aa24.3■■□□□ 1.48
PRKCB-209ENST00000498058 RBM17Q96I25 401 aaKnown RBP24.3■■□□□ 1.48
PRKCB-209ENST00000498058 ADAMTS8Q9UP79 889 aa24.3■■□□□ 1.48
PRKCB-209ENST00000498058 RNF123Q5XPI4 1314 aa24.3■■□□□ 1.48
PRKCB-209ENST00000498058 LTBP1Q14766 1721 aa24.3■■□□□ 1.48
PRKCB-209ENST00000498058 PPEF1O14829 653 aaPredicted RBP24.29■■□□□ 1.48
PRKCB-209ENST00000498058 AIMP1Q12904 312 aaKnown RBP24.29■■□□□ 1.48
PRKCB-209ENST00000498058 CC2D2BQ6DHV5 1058 aa24.29■■□□□ 1.48
PRKCB-209ENST00000498058 RUNDC1Q96C34 613 aa24.29■■□□□ 1.48
PRKCB-209ENST00000498058 UTP14AQ9BVJ6 771 aaKnown RBP24.29■■□□□ 1.48
PRKCB-209ENST00000498058 HACL1Q9UJ83 578 aa24.29■■□□□ 1.48
PRKCB-209ENST00000498058 ITGBL1O95965 494 aaPredicted RBP24.28■■□□□ 1.48
PRKCB-209ENST00000498058 EAPPQ56P03 285 aaPredicted RBP24.28■■□□□ 1.48
PRKCB-209ENST00000498058 CREBZFQ9NS37 354 aa24.28■■□□□ 1.48
PRKCB-209ENST00000498058 EPHX2P34913 555 aa24.27■■□□□ 1.48
PRKCB-209ENST00000498058 NLRP10Q86W26 655 aa24.27■■□□□ 1.48
PRKCB-209ENST00000498058 ZNF428Q96B54 188 aa24.27■■□□□ 1.48
PRKCB-209ENST00000498058 NLRP3Q96P20 1036 aa24.27■■□□□ 1.48
PRKCB-209ENST00000498058 MKRN1Q9UHC7 482 aaKnown RBP24.27■■□□□ 1.48
PRKCB-209ENST00000498058 LAS1LQ9Y4W2 734 aaKnown RBP24.27■■□□□ 1.48
PRKCB-209ENST00000498058 TAF1P21675 1872 aa24.27■■□□□ 1.48
PRKCB-209ENST00000498058 HSPA1AP0DMV8 641 aaKnown RBP24.26■■□□□ 1.47
PRKCB-209ENST00000498058 HSPA1BP0DMV9 641 aaKnown RBP24.26■■□□□ 1.47
PRKCB-209ENST00000498058 GPC2Q8N158 579 aa24.26■■□□□ 1.47
PRKCB-209ENST00000498058 DDX21Q9NR30 783 aaKnown RBP eCLIP24.26■■□□□ 1.47
PRKCB-209ENST00000498058 HCLS1P14317 486 aaPredicted RBP24.25■■□□□ 1.47
PRKCB-209ENST00000498058 TCIRG1Q13488 830 aa24.25■■□□□ 1.47
PRKCB-209ENST00000498058 JDP2Q8WYK2 163 aa24.25■■□□□ 1.47
PRKCB-209ENST00000498058 CHPF2Q9P2E5 772 aa24.25■■□□□ 1.47
PRKCB-209ENST00000498058 ABCC4O15439 1325 aa24.25■■□□□ 1.47
PRKCB-209ENST00000498058 ZNF316A6NFI3 1004 aaPredicted RBP24.23■■□□□ 1.47
PRKCB-209ENST00000498058 WDR43Q15061 677 aaKnown RBP eCLIP24.23■■□□□ 1.47
PRKCB-209ENST00000498058 LARGE2Q8N3Y3 721 aa24.23■■□□□ 1.47
PRKCB-209ENST00000498058 ATP6V0A2Q9Y487 856 aa24.23■■□□□ 1.47
PRKCB-209ENST00000498058 GJA3Q9Y6H8 435 aa24.23■■□□□ 1.47
PRKCB-209ENST00000498058 MAP1SQ66K74 1059 aaPredicted RBP24.22■■□□□ 1.47
PRKCB-209ENST00000498058 PRKRIP1Q9H875 184 aaPredicted RBP24.22■■□□□ 1.47
PRKCB-209ENST00000498058 CLEC11AQ9Y240 323 aa24.22■■□□□ 1.47
PRKCB-209ENST00000498058 SCNN1DP51172 638 aa24.21■■□□□ 1.47
PRKCB-209ENST00000498058 EIF6P56537 245 aaKnown RBP24.21■■□□□ 1.47
PRKCB-209ENST00000498058 HSP90AB3PQ58FF7 597 aa24.21■■□□□ 1.47
PRKCB-209ENST00000498058 DDX60Q8IY21 1712 aaKnown RBP24.21■■□□□ 1.47
PRKCB-209ENST00000498058 CNTNAP1P78357 1384 aa24.2■■□□□ 1.46
PRKCB-209ENST00000498058 EPS15P42566 896 aa24.2■■□□□ 1.46
PRKCB-209ENST00000498058 AOC3Q16853 763 aa24.2■■□□□ 1.46
PRKCB-209ENST00000498058 GRIPAP1Q4V328 841 aa24.2■■□□□ 1.46
PRKCB-209ENST00000498058 TRMT112Q9UI30 125 aaKnown RBP24.2■■□□□ 1.46
PRKCB-209ENST00000498058 HDGFL1Q5TGJ6 251 aa24.19■■□□□ 1.46
PRKCB-209ENST00000498058 PNMA8AQ86V59 439 aaPredicted RBP24.19■■□□□ 1.46
PRKCB-209ENST00000498058 CNTROBQ8N137 903 aa24.19■■□□□ 1.46
PRKCB-209ENST00000498058 COL4A1P02462 1669 aa24.18■■□□□ 1.46
PRKCB-209ENST00000498058 PPIP5K2O43314 1243 aa24.18■■□□□ 1.46
PRKCB-209ENST00000498058 CFAP44Q96MT7 982 aa24.18■■□□□ 1.46
PRKCB-209ENST00000498058 MBIPQ9NS73 344 aa24.18■■□□□ 1.46
PRKCB-209ENST00000498058 SH3TC1Q8TE82 1336 aa24.17■■□□□ 1.46
PRKCB-209ENST00000498058 TMEM88BA6NKF7 163 aa24.17■■□□□ 1.46
PRKCB-209ENST00000498058 ZNF853P0CG23 659 aa24.17■■□□□ 1.46
PRKCB-209ENST00000498058 FMR1Q06787 632 aaKnown RBP eCLIP24.17■■□□□ 1.462e-12■□□□□ 9.5
PRKCB-209ENST00000498058 DUSP27Q5VZP5 1158 aa24.17■■□□□ 1.46
PRKCB-209ENST00000498058 NIM1KQ8IY84 436 aa24.17■■□□□ 1.46
PRKCB-209ENST00000498058 PLBD2Q8NHP8 589 aa24.17■■□□□ 1.46
PRKCB-209ENST00000498058 ISCA1Q9BUE6 129 aa24.17■■□□□ 1.46
PRKCB-209ENST00000498058 RTFDC1Q9BY42 306 aaPredicted RBP24.17■■□□□ 1.46
PRKCB-209ENST00000498058 HOXB7P09629 217 aa24.16■■□□□ 1.46
PRKCB-209ENST00000498058 SP8Q8IXZ3 490 aa24.16■■□□□ 1.46
PRKCB-209ENST00000498058 ATP5J2-PTCD1G3V325 749 aa24.15■■□□□ 1.46
PRKCB-209ENST00000498058 BBOX1O75936 387 aa24.15■■□□□ 1.46
PRKCB-209ENST00000498058 VEGFBP49765 207 aa24.15■■□□□ 1.46
PRKCB-209ENST00000498058 ANKRD13DQ6ZTN6 518 aa24.15■■□□□ 1.46
PRKCB-209ENST00000498058 DUOX1Q9NRD9 1551 aa24.15■■□□□ 1.46
PRKCB-209ENST00000498058 APAF1O14727 1248 aa24.14■■□□□ 1.45
PRKCB-209ENST00000498058 CXCL9Q07325 125 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms