RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 IQCA1LA6NCM1 817 aa18.81■□□□□ 0.6
CXCL12-208ENST00000496375 POTEIP0CG38 1075 aa18.81■□□□□ 0.6
CXCL12-208ENST00000496375 POTEJP0CG39 1038 aa18.81■□□□□ 0.6
CXCL12-208ENST00000496375 HOXA10P31260 410 aaPredicted RBP18.81■□□□□ 0.6
CXCL12-208ENST00000496375 IARSP41252 1262 aaKnown RBP18.81■□□□□ 0.6
CXCL12-208ENST00000496375 WDR43Q15061 677 aaKnown RBP eCLIP18.81■□□□□ 0.6
CXCL12-208ENST00000496375 CHADLQ6NUI6 762 aa18.81■□□□□ 0.6
CXCL12-208ENST00000496375 PPP1R42Q7Z4L9 355 aa18.81■□□□□ 0.6
CXCL12-208ENST00000496375 L3MBTL3Q96JM7 780 aaPredicted RBP18.81■□□□□ 0.6
CXCL12-208ENST00000496375 SNED1Q8TER0 1413 aa18.81■□□□□ 0.6
CXCL12-208ENST00000496375 SCN4AP35499 1836 aa18.8■□□□□ 0.6
CXCL12-208ENST00000496375 PARP10Q53GL7 1025 aa18.8■□□□□ 0.6
CXCL12-208ENST00000496375 NECTIN2Q92692 538 aa18.8■□□□□ 0.6
CXCL12-208ENST00000496375 RUNDC1Q96C34 613 aa18.8■□□□□ 0.6
CXCL12-208ENST00000496375 CC2D2BQ6DHV5 1058 aa18.79■□□□□ 0.6
CXCL12-208ENST00000496375 C3orf67Q6ZVT6 689 aa18.79■□□□□ 0.6
CXCL12-208ENST00000496375 RBM17Q96I25 401 aaKnown RBP18.79■□□□□ 0.6
CXCL12-208ENST00000496375 PSMD1Q99460 953 aa18.79■□□□□ 0.6
CXCL12-208ENST00000496375 LAS1LQ9Y4W2 734 aaKnown RBP18.79■□□□□ 0.6
CXCL12-208ENST00000496375 KRT24Q2M2I5 525 aa18.78■□□□□ 0.6
CXCL12-208ENST00000496375 UTP14AQ9BVJ6 771 aaKnown RBP18.78■□□□□ 0.6
CXCL12-208ENST00000496375 TAF1DQ9H5J8 278 aaPredicted RBP18.78■□□□□ 0.6
CXCL12-208ENST00000496375 TRIM35Q9UPQ4 493 aa18.78■□□□□ 0.6
CXCL12-208ENST00000496375 FZD9O00144 591 aa18.77■□□□□ 0.6
CXCL12-208ENST00000496375 CHL1O00533 1208 aa18.77■□□□□ 0.6
CXCL12-208ENST00000496375 AIMP1Q12904 312 aaKnown RBP18.77■□□□□ 0.6
CXCL12-208ENST00000496375 COPS6Q7L5N1 327 aa18.77■□□□□ 0.6
CXCL12-208ENST00000496375 XAGE3Q8WTP9 111 aa18.77■□□□□ 0.6
CXCL12-208ENST00000496375 NLRP3Q96P20 1036 aa18.77■□□□□ 0.6
CXCL12-208ENST00000496375 CRAMP1Q96RY5 1269 aa18.77■□□□□ 0.6
CXCL12-208ENST00000496375 ANKRD36CQ5JPF3 1778 aa18.76■□□□□ 0.59
CXCL12-208ENST00000496375 TCERG1O14776 1098 aaKnown RBP18.76■□□□□ 0.59
CXCL12-208ENST00000496375 PPEF1O14829 653 aaPredicted RBP18.76■□□□□ 0.59
CXCL12-208ENST00000496375 CCDC184Q52MB2 194 aa18.76■□□□□ 0.59
CXCL12-208ENST00000496375 SLC51AQ86UW1 340 aa18.76■□□□□ 0.59
CXCL12-208ENST00000496375 LDHDQ86WU2 507 aa18.76■□□□□ 0.59
CXCL12-208ENST00000496375 ADAMTS8Q9UP79 889 aa18.76■□□□□ 0.59
CXCL12-208ENST00000496375 HSP90AB3PQ58FF7 597 aa18.75■□□□□ 0.59
CXCL12-208ENST00000496375 JDP2Q8WYK2 163 aa18.75■□□□□ 0.59
CXCL12-208ENST00000496375 DDX21Q9NR30 783 aaKnown RBP eCLIP18.75■□□□□ 0.59
CXCL12-208ENST00000496375 HACL1Q9UJ83 578 aa18.75■□□□□ 0.59
CXCL12-208ENST00000496375 COL4A5P29400 1685 aa18.74■□□□□ 0.59
CXCL12-208ENST00000496375 GRIPAP1Q4V328 841 aa18.74■□□□□ 0.59
CXCL12-208ENST00000496375 EAPPQ56P03 285 aaPredicted RBP18.74■□□□□ 0.59
CXCL12-208ENST00000496375 SLC10A5Q5PT55 438 aa18.74■□□□□ 0.59
CXCL12-208ENST00000496375 RNF123Q5XPI4 1314 aa18.74■□□□□ 0.59
CXCL12-208ENST00000496375 EPHX2P34913 555 aa18.73■□□□□ 0.59
CXCL12-208ENST00000496375 NLRP10Q86W26 655 aa18.73■□□□□ 0.59
CXCL12-208ENST00000496375 GPC2Q8N158 579 aa18.73■□□□□ 0.59
CXCL12-208ENST00000496375 CREBZFQ9NS37 354 aa18.73■□□□□ 0.59
CXCL12-208ENST00000496375 CHPF2Q9P2E5 772 aa18.73■□□□□ 0.59
CXCL12-208ENST00000496375 EIF6P56537 245 aaKnown RBP18.72■□□□□ 0.59
CXCL12-208ENST00000496375 TCIRG1Q13488 830 aa18.72■□□□□ 0.59
CXCL12-208ENST00000496375 HDGFL1Q5TGJ6 251 aa18.72■□□□□ 0.59
CXCL12-208ENST00000496375 LARGE2Q8N3Y3 721 aa18.72■□□□□ 0.59
CXCL12-208ENST00000496375 LAMB2P55268 1798 aa18.72■□□□□ 0.59
CXCL12-208ENST00000496375 ABCC4O15439 1325 aa18.72■□□□□ 0.59
CXCL12-208ENST00000496375 HCLS1P14317 486 aaPredicted RBP18.71■□□□□ 0.59
CXCL12-208ENST00000496375 TMX4Q9H1E5 349 aaPredicted RBP18.71■□□□□ 0.59
CXCL12-208ENST00000496375 TRMT112Q9UI30 125 aaKnown RBP18.71■□□□□ 0.59
CXCL12-208ENST00000496375 CLEC11AQ9Y240 323 aa18.71■□□□□ 0.59
CXCL12-208ENST00000496375 GJA3Q9Y6H8 435 aa18.71■□□□□ 0.59
CXCL12-208ENST00000496375 PASKQ96RG2 1323 aa18.71■□□□□ 0.59
CXCL12-208ENST00000496375 ADAMTSL1Q8N6G6 1762 aa18.7■□□□□ 0.58
CXCL12-208ENST00000496375 HOXB7P09629 217 aa18.7■□□□□ 0.58
CXCL12-208ENST00000496375 PNMA8AQ86V59 439 aaPredicted RBP18.7■□□□□ 0.58
CXCL12-208ENST00000496375 MRS2Q9HD23 443 aa18.7■□□□□ 0.58
CXCL12-208ENST00000496375 MKRN1Q9UHC7 482 aaKnown RBP18.7■□□□□ 0.58
CXCL12-208ENST00000496375 ATP6V0A2Q9Y487 856 aa18.7■□□□□ 0.58
CXCL12-208ENST00000496375 SH3TC1Q8TE82 1336 aa18.7■□□□□ 0.58
CXCL12-208ENST00000496375 HSPA1AP0DMV8 641 aaKnown RBP18.69■□□□□ 0.58
CXCL12-208ENST00000496375 HSPA1BP0DMV9 641 aaKnown RBP18.69■□□□□ 0.58
CXCL12-208ENST00000496375 COL13A1Q5TAT6 717 aaPredicted RBP18.69■□□□□ 0.58
CXCL12-208ENST00000496375 CFAP44Q96MT7 982 aa18.69■□□□□ 0.58
CXCL12-208ENST00000496375 PPIP5K2O43314 1243 aa18.68■□□□□ 0.58
CXCL12-208ENST00000496375 ITGBL1O95965 494 aaPredicted RBP18.68■□□□□ 0.58
CXCL12-208ENST00000496375 NIM1KQ8IY84 436 aa18.68■□□□□ 0.58
CXCL12-208ENST00000496375 ZNF428Q96B54 188 aa18.68■□□□□ 0.58
CXCL12-208ENST00000496375 MBIPQ9NS73 344 aa18.68■□□□□ 0.58
CXCL12-208ENST00000496375 DBF4Q9UBU7 674 aaPredicted RBP18.68■□□□□ 0.58
CXCL12-208ENST00000496375 LTBP1Q14766 1721 aa18.67■□□□□ 0.58
CXCL12-208ENST00000496375 BBOX1O75936 387 aa18.67■□□□□ 0.58
CXCL12-208ENST00000496375 AOC3Q16853 763 aa18.67■□□□□ 0.58
CXCL12-208ENST00000496375 DUSP27Q5VZP5 1158 aa18.67■□□□□ 0.58
CXCL12-208ENST00000496375 MAP1SQ66K74 1059 aaPredicted RBP18.67■□□□□ 0.58
CXCL12-208ENST00000496375 DDX46Q7L014 1031 aaKnown RBP18.67■□□□□ 0.58
CXCL12-208ENST00000496375 PLBD2Q8NHP8 589 aa18.67■□□□□ 0.58
CXCL12-208ENST00000496375 LMOD1P29536 600 aaPredicted RBP18.66■□□□□ 0.58
CXCL12-208ENST00000496375 ANKRD13DQ6ZTN6 518 aa18.66■□□□□ 0.58
CXCL12-208ENST00000496375 SP8Q8IXZ3 490 aa18.66■□□□□ 0.58
CXCL12-208ENST00000496375 SUPT20HQ8NEM7 779 aa18.66■□□□□ 0.58
CXCL12-208ENST00000496375 CNTNAP1P78357 1384 aa18.66■□□□□ 0.58
CXCL12-208ENST00000496375 TAF1P21675 1872 aa18.65■□□□□ 0.58
CXCL12-208ENST00000496375 TMEM88BA6NKF7 163 aa18.65■□□□□ 0.58
CXCL12-208ENST00000496375 CCER2I3L3R5 266 aa18.65■□□□□ 0.58
CXCL12-208ENST00000496375 APAF1O14727 1248 aa18.65■□□□□ 0.58
CXCL12-208ENST00000496375 SCNN1DP51172 638 aa18.65■□□□□ 0.58
CXCL12-208ENST00000496375 GRAPQ13588 217 aa18.65■□□□□ 0.58
CXCL12-208ENST00000496375 DPP8Q6V1X1 898 aaPredicted RBP18.65■□□□□ 0.58
CXCL12-208ENST00000496375 CNTROBQ8N137 903 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms