RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 CRY2Q49AN0 593 aa14.27□□□□□ -0.13
RNF220-217ENST00000496262 EAPPQ56P03 285 aaPredicted RBP14.27□□□□□ -0.13
RNF220-217ENST00000496262 C3orf67Q6ZVT6 689 aa14.27□□□□□ -0.13
RNF220-217ENST00000496262 ZNF34Q8IZ26 560 aa14.27□□□□□ -0.13
RNF220-217ENST00000496262 SYNE4Q8N205 404 aa14.27□□□□□ -0.13
RNF220-217ENST00000496262 JMYQ8N9B5 988 aa14.27□□□□□ -0.13
RNF220-217ENST00000496262 NUP98P52948 1817 aa14.27□□□□□ -0.13
RNF220-217ENST00000496262 ERBB4Q15303 1308 aa14.26□□□□□ -0.13
RNF220-217ENST00000496262 NTSR2O95665 410 aa14.26□□□□□ -0.13
RNF220-217ENST00000496262 AIMP1Q12904 312 aaKnown RBP14.26□□□□□ -0.13
RNF220-217ENST00000496262 WDR43Q15061 677 aaKnown RBP eCLIP14.26□□□□□ -0.13
RNF220-217ENST00000496262 PDIA6Q15084 440 aa14.26□□□□□ -0.13
RNF220-217ENST00000496262 GIGYF2Q6Y7W6 1299 aaKnown RBP14.26□□□□□ -0.13
RNF220-217ENST00000496262 ZNF428Q96B54 188 aa14.26□□□□□ -0.13
RNF220-217ENST00000496262 IBTKQ9P2D0 1353 aaPredicted RBP14.25□□□□□ -0.13
RNF220-217ENST00000496262 RNF123Q5XPI4 1314 aa14.25□□□□□ -0.13
RNF220-217ENST00000496262 PPEF1O14829 653 aaPredicted RBP14.25□□□□□ -0.13
RNF220-217ENST00000496262 KRT24Q2M2I5 525 aa14.25□□□□□ -0.13
RNF220-217ENST00000496262 PPP1R42Q7Z4L9 355 aa14.25□□□□□ -0.13
RNF220-217ENST00000496262 RBM17Q96I25 401 aaKnown RBP14.25□□□□□ -0.13
RNF220-217ENST00000496262 L3MBTL3Q96JM7 780 aaPredicted RBP14.25□□□□□ -0.13
RNF220-217ENST00000496262 TAF1DQ9H5J8 278 aaPredicted RBP14.25□□□□□ -0.13
RNF220-217ENST00000496262 PCNTO95613 3336 aa14.24□□□□□ -0.13
RNF220-217ENST00000496262 LRP10Q7Z4F1 713 aa14.24□□□□□ -0.13
RNF220-217ENST00000496262 XAGE3Q8WTP9 111 aa14.24□□□□□ -0.13
RNF220-217ENST00000496262 JDP2Q8WYK2 163 aa14.24□□□□□ -0.13
RNF220-217ENST00000496262 UTP14AQ9BVJ6 771 aaKnown RBP14.24□□□□□ -0.13
RNF220-217ENST00000496262 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
RNF220-217ENST00000496262 HACL1Q9UJ83 578 aa14.24□□□□□ -0.13
RNF220-217ENST00000496262 CLEC11AQ9Y240 323 aa14.24□□□□□ -0.13
RNF220-217ENST00000496262 GJA3Q9Y6H8 435 aa14.24□□□□□ -0.13
RNF220-217ENST00000496262 HOXA10P31260 410 aaPredicted RBP14.23□□□□□ -0.13
RNF220-217ENST00000496262 PARP10Q53GL7 1025 aa14.23□□□□□ -0.13
RNF220-217ENST00000496262 COL13A1Q5TAT6 717 aaPredicted RBP14.23□□□□□ -0.13
RNF220-217ENST00000496262 COPS6Q7L5N1 327 aa14.23□□□□□ -0.13
RNF220-217ENST00000496262 LDHDQ86WU2 507 aa14.23□□□□□ -0.13
RNF220-217ENST00000496262 PSMD1Q99460 953 aa14.23□□□□□ -0.13
RNF220-217ENST00000496262 RIC1Q4ADV7 1423 aa14.23□□□□□ -0.13
RNF220-217ENST00000496262 FZD9O00144 591 aa14.22□□□□□ -0.13
RNF220-217ENST00000496262 EPHX2P34913 555 aa14.22□□□□□ -0.13
RNF220-217ENST00000496262 CC2D2BQ6DHV5 1058 aa14.22□□□□□ -0.13
RNF220-217ENST00000496262 LARGE2Q8N3Y3 721 aa14.22□□□□□ -0.13
RNF220-217ENST00000496262 RUNDC1Q96C34 613 aa14.22□□□□□ -0.13
RNF220-217ENST00000496262 NLRP3Q96P20 1036 aa14.22□□□□□ -0.13
RNF220-217ENST00000496262 BABAM1Q9NWV8 329 aa14.22□□□□□ -0.13
RNF220-217ENST00000496262 SUPT16HQ9Y5B9 1047 aaKnown RBP14.22□□□□□ -0.13
RNF220-217ENST00000496262 COL4A5P29400 1685 aa14.22□□□□□ -0.13
RNF220-217ENST00000496262 SNED1Q8TER0 1413 aa14.22□□□□□ -0.13
RNF220-217ENST00000496262 HSPA1AP0DMV8 641 aaKnown RBP14.21□□□□□ -0.13
RNF220-217ENST00000496262 HSPA1BP0DMV9 641 aaKnown RBP14.21□□□□□ -0.13
RNF220-217ENST00000496262 EIF6P56537 245 aaKnown RBP14.21□□□□□ -0.13
RNF220-217ENST00000496262 GPC2Q8N158 579 aa14.21□□□□□ -0.13
RNF220-217ENST00000496262 CRAMP1Q96RY5 1269 aa14.21□□□□□ -0.13
RNF220-217ENST00000496262 TMX4Q9H1E5 349 aaPredicted RBP14.21□□□□□ -0.13
RNF220-217ENST00000496262 CREBZFQ9NS37 354 aa14.21□□□□□ -0.13
RNF220-217ENST00000496262 CHPF2Q9P2E5 772 aa14.21□□□□□ -0.13
RNF220-217ENST00000496262 ADAMTS8Q9UP79 889 aa14.21□□□□□ -0.13
RNF220-217ENST00000496262 TRIM35Q9UPQ4 493 aa14.21□□□□□ -0.13
RNF220-217ENST00000496262 CHL1O00533 1208 aa14.2□□□□□ -0.14
RNF220-217ENST00000496262 HCLS1P14317 486 aaPredicted RBP14.2□□□□□ -0.14
RNF220-217ENST00000496262 HDGFL1Q5TGJ6 251 aa14.2□□□□□ -0.14
RNF220-217ENST00000496262 MAP1SQ66K74 1059 aaPredicted RBP14.2□□□□□ -0.14
RNF220-217ENST00000496262 TRMT112Q9UI30 125 aaKnown RBP14.2□□□□□ -0.14
RNF220-217ENST00000496262 SCN4AP35499 1836 aa14.2□□□□□ -0.14
RNF220-217ENST00000496262 ABCC4O15439 1325 aa14.19□□□□□ -0.14
RNF220-217ENST00000496262 PPIP5K2O43314 1243 aa14.19□□□□□ -0.14
RNF220-217ENST00000496262 HSP90AB3PQ58FF7 597 aa14.19□□□□□ -0.14
RNF220-217ENST00000496262 NLRP10Q86W26 655 aa14.19□□□□□ -0.14
RNF220-217ENST00000496262 NIM1KQ8IY84 436 aa14.19□□□□□ -0.14
RNF220-217ENST00000496262 DDX21Q9NR30 783 aaKnown RBP eCLIP14.19□□□□□ -0.14
RNF220-217ENST00000496262 PASKQ96RG2 1323 aa14.18□□□□□ -0.14
RNF220-217ENST00000496262 CAPN15O75808 1086 aa14.18□□□□□ -0.14
RNF220-217ENST00000496262 LMOD1P29536 600 aaPredicted RBP14.18□□□□□ -0.14
RNF220-217ENST00000496262 TCIRG1Q13488 830 aa14.18□□□□□ -0.14
RNF220-217ENST00000496262 AOC3Q16853 763 aa14.18□□□□□ -0.14
RNF220-217ENST00000496262 PNMA8AQ86V59 439 aaPredicted RBP14.18□□□□□ -0.14
RNF220-217ENST00000496262 ATP6V0A2Q9Y487 856 aa14.18□□□□□ -0.14
RNF220-217ENST00000496262 ITGBL1O95965 494 aaPredicted RBP14.17□□□□□ -0.14
RNF220-217ENST00000496262 GRIPAP1Q4V328 841 aa14.17□□□□□ -0.14
RNF220-217ENST00000496262 SLC10A5Q5PT55 438 aa14.17□□□□□ -0.14
RNF220-217ENST00000496262 TNS4Q8IZW8 715 aa14.17□□□□□ -0.14
RNF220-217ENST00000496262 ANKRD36CQ5JPF3 1778 aa14.17□□□□□ -0.14
RNF220-217ENST00000496262 SH3TC1Q8TE82 1336 aa14.16□□□□□ -0.14
RNF220-217ENST00000496262 TMEM88BA6NKF7 163 aa14.16□□□□□ -0.14
RNF220-217ENST00000496262 ATP5J2-PTCD1G3V325 749 aa14.16□□□□□ -0.14
RNF220-217ENST00000496262 EPS15P42566 896 aa14.16□□□□□ -0.14
RNF220-217ENST00000496262 RTL5Q5HYW3 569 aaPredicted RBP14.16□□□□□ -0.14
RNF220-217ENST00000496262 DPP8Q6V1X1 898 aaPredicted RBP14.16□□□□□ -0.14
RNF220-217ENST00000496262 DDX46Q7L014 1031 aaKnown RBP14.16□□□□□ -0.14
RNF220-217ENST00000496262 CNTROBQ8N137 903 aa14.16□□□□□ -0.14
RNF220-217ENST00000496262 PRKRIP1Q9H875 184 aaPredicted RBP14.16□□□□□ -0.14
RNF220-217ENST00000496262 MBIPQ9NS73 344 aa14.16□□□□□ -0.14
RNF220-217ENST00000496262 CNTNAP1P78357 1384 aa14.16□□□□□ -0.14
RNF220-217ENST00000496262 ADAMTSL1Q8N6G6 1762 aa14.15□□□□□ -0.14
RNF220-217ENST00000496262 SCNN1DP51172 638 aa14.15□□□□□ -0.14
RNF220-217ENST00000496262 DUSP27Q5VZP5 1158 aa14.15□□□□□ -0.14
RNF220-217ENST00000496262 DBF4Q9UBU7 674 aaPredicted RBP14.15□□□□□ -0.14
RNF220-217ENST00000496262 LTBP1Q14766 1721 aa14.15□□□□□ -0.14
RNF220-217ENST00000496262 APAF1O14727 1248 aa14.14□□□□□ -0.15
RNF220-217ENST00000496262 ANKRD13DQ6ZTN6 518 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms