RNA–Protein interactions for RNA: ENST00000494658.1

EIF3B-212, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 2

Gene EIF3B, Length 637 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-212ENST00000494658 RIPK4P57078 832 aa23.11■■□□□ 1.29
EIF3B-212ENST00000494658 RTKN2Q8IZC4 609 aa23.11■■□□□ 1.29
EIF3B-212ENST00000494658 MKRN1Q9UHC7 482 aaKnown RBP23.11■■□□□ 1.29
EIF3B-212ENST00000494658 RNF123Q5XPI4 1314 aa23.1■■□□□ 1.29
EIF3B-212ENST00000494658 EIF2S2P20042 333 aaKnown RBP23.1■■□□□ 1.29
EIF3B-212ENST00000494658 GIGYF2Q6Y7W6 1299 aaKnown RBP23.1■■□□□ 1.29
EIF3B-212ENST00000494658 DDX60Q8IY21 1712 aaKnown RBP23.1■■□□□ 1.29
EIF3B-212ENST00000494658 PASKQ96RG2 1323 aa23.09■■□□□ 1.29
EIF3B-212ENST00000494658 FZD9O00144 591 aa23.09■■□□□ 1.29
EIF3B-212ENST00000494658 TCERG1O14776 1098 aaKnown RBP23.09■■□□□ 1.29
EIF3B-212ENST00000494658 EAPPQ56P03 285 aaPredicted RBP23.09■■□□□ 1.29
EIF3B-212ENST00000494658 CCDC146Q8IYE0 955 aa23.09■■□□□ 1.29
EIF3B-212ENST00000494658 NECTIN2Q92692 538 aa23.09■■□□□ 1.29
EIF3B-212ENST00000494658 IQCA1LA6NCM1 817 aa23.08■■□□□ 1.29
EIF3B-212ENST00000494658 HOXA10P31260 410 aaPredicted RBP23.08■■□□□ 1.29
EIF3B-212ENST00000494658 TMPOP42166 694 aaKnown RBP23.08■■□□□ 1.29
EIF3B-212ENST00000494658 KRT24Q2M2I5 525 aa23.08■■□□□ 1.29
EIF3B-212ENST00000494658 LDHDQ86WU2 507 aa23.08■■□□□ 1.29
EIF3B-212ENST00000494658 RPGRQ92834 1020 aaKnown RBP23.08■■□□□ 1.29
EIF3B-212ENST00000494658 CREBZFQ9NS37 354 aa23.08■■□□□ 1.29
EIF3B-212ENST00000494658 ERBB4Q15303 1308 aa23.08■■□□□ 1.28
EIF3B-212ENST00000494658 PSMD1Q99460 953 aa23.07■■□□□ 1.28
EIF3B-212ENST00000494658 PNNQ9H307 717 aaKnown RBP23.07■■□□□ 1.28
EIF3B-212ENST00000494658 TRPM7Q96QT4 1865 aa23.07■■□□□ 1.28
EIF3B-212ENST00000494658 HACL1Q9UJ83 578 aa23.06■■□□□ 1.28
EIF3B-212ENST00000494658 ITGBL1O95965 494 aaPredicted RBP23.05■■□□□ 1.28
EIF3B-212ENST00000494658 EPHX2P34913 555 aa23.05■■□□□ 1.28
EIF3B-212ENST00000494658 ZNF428Q96B54 188 aa23.05■■□□□ 1.28
EIF3B-212ENST00000494658 COL4A1P02462 1669 aa23.04■■□□□ 1.28
EIF3B-212ENST00000494658 PPEF1O14829 653 aaPredicted RBP23.04■■□□□ 1.28
EIF3B-212ENST00000494658 RALBP1Q15311 655 aa23.04■■□□□ 1.28
EIF3B-212ENST00000494658 NEUROD2Q15784 382 aa23.04■■□□□ 1.28
EIF3B-212ENST00000494658 CNTNAP1P78357 1384 aa23.03■■□□□ 1.28
EIF3B-212ENST00000494658 DDX10Q13206 875 aaKnown RBP23.03■■□□□ 1.28
EIF3B-212ENST00000494658 CRAMP1Q96RY5 1269 aa23.03■■□□□ 1.28
EIF3B-212ENST00000494658 CAPN15O75808 1086 aa23.02■■□□□ 1.28
EIF3B-212ENST00000494658 AIMP1Q12904 312 aaKnown RBP23.02■■□□□ 1.28
EIF3B-212ENST00000494658 MAP1SQ66K74 1059 aaPredicted RBP23.02■■□□□ 1.28
EIF3B-212ENST00000494658 GPC2Q8N158 579 aa23.02■■□□□ 1.28
EIF3B-212ENST00000494658 CLEC11AQ9Y240 323 aa23.02■■□□□ 1.28
EIF3B-212ENST00000494658 GJA3Q9Y6H8 435 aa23.02■■□□□ 1.28
EIF3B-212ENST00000494658 LRRC37AA6NMS7 1700 aa23.02■■□□□ 1.28
EIF3B-212ENST00000494658 COPS6Q7L5N1 327 aa23.01■■□□□ 1.27
EIF3B-212ENST00000494658 PPP1R42Q7Z4L9 355 aa23.01■■□□□ 1.27
EIF3B-212ENST00000494658 TNS4Q8IZW8 715 aa23.01■■□□□ 1.27
EIF3B-212ENST00000494658 XAGE3Q8WTP9 111 aa23.01■■□□□ 1.27
EIF3B-212ENST00000494658 RBM17Q96I25 401 aaKnown RBP23.01■■□□□ 1.27
EIF3B-212ENST00000494658 ABCC4O15439 1325 aa23.01■■□□□ 1.27
EIF3B-212ENST00000494658 PARP10Q53GL7 1025 aa23■■□□□ 1.27
EIF3B-212ENST00000494658 CC2D2BQ6DHV5 1058 aa23■■□□□ 1.27
EIF3B-212ENST00000494658 JDP2Q8WYK2 163 aa23■■□□□ 1.27
EIF3B-212ENST00000494658 TRIM35Q9UPQ4 493 aa23■■□□□ 1.27
EIF3B-212ENST00000494658 MYBBP1AQ9BQG0 1328 aaKnown RBP23■■□□□ 1.27
EIF3B-212ENST00000494658 DUOX1Q9NRD9 1551 aa22.99■■□□□ 1.27
EIF3B-212ENST00000494658 SCNN1DP51172 638 aa22.99■■□□□ 1.27
EIF3B-212ENST00000494658 FMR1Q06787 632 aaKnown RBP eCLIP22.99■■□□□ 1.27
EIF3B-212ENST00000494658 LARGE2Q8N3Y3 721 aa22.99■■□□□ 1.27
EIF3B-212ENST00000494658 UTP14AQ9BVJ6 771 aaKnown RBP22.99■■□□□ 1.27
EIF3B-212ENST00000494658 HCLS1P14317 486 aaPredicted RBP22.98■■□□□ 1.27
EIF3B-212ENST00000494658 EPS15P42566 896 aa22.98■■□□□ 1.27
EIF3B-212ENST00000494658 AOC3Q16853 763 aa22.98■■□□□ 1.27
EIF3B-212ENST00000494658 NLRP10Q86W26 655 aa22.98■■□□□ 1.27
EIF3B-212ENST00000494658 NLRP3Q96P20 1036 aa22.98■■□□□ 1.27
EIF3B-212ENST00000494658 BABAM1Q9NWV8 329 aa22.98■■□□□ 1.27
EIF3B-212ENST00000494658 LAS1LQ9Y4W2 734 aaKnown RBP22.98■■□□□ 1.27
EIF3B-212ENST00000494658 TMEM88BA6NKF7 163 aa22.97■■□□□ 1.27
EIF3B-212ENST00000494658 VEGFBP49765 207 aa22.97■■□□□ 1.27
EIF3B-212ENST00000494658 EIF6P56537 245 aaKnown RBP22.97■■□□□ 1.27
EIF3B-212ENST00000494658 LMOD3Q0VAK6 560 aa22.97■■□□□ 1.27
EIF3B-212ENST00000494658 SLC10A5Q5PT55 438 aa22.97■■□□□ 1.27
EIF3B-212ENST00000494658 CNTROBQ8N137 903 aa22.97■■□□□ 1.27
EIF3B-212ENST00000494658 CHL1O00533 1208 aa22.96■■□□□ 1.27
EIF3B-212ENST00000494658 FOXN1O15353 648 aa22.96■■□□□ 1.27
EIF3B-212ENST00000494658 CHPF2Q9P2E5 772 aa22.96■■□□□ 1.27
EIF3B-212ENST00000494658 ATP6V0A2Q9Y487 856 aa22.96■■□□□ 1.27
EIF3B-212ENST00000494658 PPIP5K2O43314 1243 aa22.95■■□□□ 1.26
EIF3B-212ENST00000494658 PNMA8AQ86V59 439 aaPredicted RBP22.95■■□□□ 1.26
EIF3B-212ENST00000494658 DDX21Q9NR30 783 aaKnown RBP eCLIP22.95■■□□□ 1.26
EIF3B-212ENST00000494658 NIM1KQ8IY84 436 aa22.94■■□□□ 1.26
EIF3B-212ENST00000494658 THSD7BQ9C0I4 1608 aa22.93■■□□□ 1.26
EIF3B-212ENST00000494658 TCIRG1Q13488 830 aa22.93■■□□□ 1.26
EIF3B-212ENST00000494658 RUNDC1Q96C34 613 aa22.93■■□□□ 1.26
EIF3B-212ENST00000494658 ADAMTS8Q9UP79 889 aa22.93■■□□□ 1.26
EIF3B-212ENST00000494658 POLR2AP24928 1970 aaKnown RBP22.92■■□□□ 1.26
EIF3B-212ENST00000494658 TRMT112Q9UI30 125 aaKnown RBP22.92■■□□□ 1.26
EIF3B-212ENST00000494658 LMOD1P29536 600 aaPredicted RBP22.91■■□□□ 1.26
EIF3B-212ENST00000494658 CXCL9Q07325 125 aa22.9■■□□□ 1.26
EIF3B-212ENST00000494658 WDR43Q15061 677 aaKnown RBP eCLIP22.9■■□□□ 1.26
EIF3B-212ENST00000494658 GRIPAP1Q4V328 841 aa22.9■■□□□ 1.26
EIF3B-212ENST00000494658 HSP90AB3PQ58FF7 597 aa22.9■■□□□ 1.26
EIF3B-212ENST00000494658 RTFDC1Q9BY42 306 aaPredicted RBP22.9■■□□□ 1.26
EIF3B-212ENST00000494658 SH3TC1Q8TE82 1336 aa22.89■■□□□ 1.26
EIF3B-212ENST00000494658 SCN9AQ15858 1988 aa22.89■■□□□ 1.26
EIF3B-212ENST00000494658 TRAF5O00463 557 aa22.89■■□□□ 1.25
EIF3B-212ENST00000494658 HDGFL1Q5TGJ6 251 aa22.89■■□□□ 1.25
EIF3B-212ENST00000494658 SPEF2Q9C093 1822 aa22.88■■□□□ 1.25
EIF3B-212ENST00000494658 RASSF10A6NK89 507 aa22.88■■□□□ 1.25
EIF3B-212ENST00000494658 ATP5J2-PTCD1G3V325 749 aa22.88■■□□□ 1.25
EIF3B-212ENST00000494658 DPP8Q6V1X1 898 aaPredicted RBP22.88■■□□□ 1.25
EIF3B-212ENST00000494658 GRAPQ13588 217 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms