RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 TTLL7Q6ZT98 887 aa10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 NUTM1Q86Y26 1132 aa10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 RPGRQ92834 1020 aaKnown RBP10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 PSMD1Q99460 953 aa10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 THUMPD2Q9BTF0 503 aaKnown RBP10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 ZBTB3Q9H5J0 574 aa10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 MKRN1Q9UHC7 482 aaKnown RBP10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 HACL1Q9UJ83 578 aa10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 COL4A5P29400 1685 aa10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 UBN2Q6ZU65 1347 aa10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 PASKQ96RG2 1323 aa10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 TAF1P21675 1872 aa10.3□□□□□ -0.76
SEMA3F-209ENST00000493743 CNTNAP1P78357 1384 aa10.29□□□□□ -0.76
SEMA3F-209ENST00000493743 FZD9O00144 591 aa10.29□□□□□ -0.76
SEMA3F-209ENST00000493743 GPTP24298 496 aa10.29□□□□□ -0.76
SEMA3F-209ENST00000493743 HOXA10P31260 410 aaPredicted RBP10.29□□□□□ -0.76
SEMA3F-209ENST00000493743 EPHX2P34913 555 aa10.29□□□□□ -0.76
SEMA3F-209ENST00000493743 GRIPAP1Q4V328 841 aa10.29□□□□□ -0.76
SEMA3F-209ENST00000493743 EAPPQ56P03 285 aaPredicted RBP10.29□□□□□ -0.76
SEMA3F-209ENST00000493743 GPC2Q8N158 579 aa10.29□□□□□ -0.76
SEMA3F-209ENST00000493743 JDP2Q8WYK2 163 aa10.29□□□□□ -0.76
SEMA3F-209ENST00000493743 RNF123Q5XPI4 1314 aa10.29□□□□□ -0.76
SEMA3F-209ENST00000493743 NTSR2O95665 410 aa10.28□□□□□ -0.76
SEMA3F-209ENST00000493743 ITGBL1O95965 494 aaPredicted RBP10.28□□□□□ -0.76
SEMA3F-209ENST00000493743 SUSD4Q5VX71 490 aa10.28□□□□□ -0.76
SEMA3F-209ENST00000493743 GIGYF2Q6Y7W6 1299 aaKnown RBP10.28□□□□□ -0.76
SEMA3F-209ENST00000493743 PNMA8AQ86V59 439 aaPredicted RBP10.28□□□□□ -0.76
SEMA3F-209ENST00000493743 ZNF34Q8IZ26 560 aa10.28□□□□□ -0.76
SEMA3F-209ENST00000493743 CLEC11AQ9Y240 323 aa10.28□□□□□ -0.76
SEMA3F-209ENST00000493743 DDX60Q8IY21 1712 aaKnown RBP10.27□□□□□ -0.76
SEMA3F-209ENST00000493743 TMEM88BA6NKF7 163 aa10.27□□□□□ -0.77
SEMA3F-209ENST00000493743 CAPN15O75808 1086 aa10.27□□□□□ -0.77
SEMA3F-209ENST00000493743 EIF6P56537 245 aaKnown RBP10.27□□□□□ -0.77
SEMA3F-209ENST00000493743 PARP10Q53GL7 1025 aa10.27□□□□□ -0.77
SEMA3F-209ENST00000493743 PPP1R42Q7Z4L9 355 aa10.27□□□□□ -0.77
SEMA3F-209ENST00000493743 RBM17Q96I25 401 aaKnown RBP10.27□□□□□ -0.77
SEMA3F-209ENST00000493743 CRAMP1Q96RY5 1269 aa10.27□□□□□ -0.77
SEMA3F-209ENST00000493743 TSPYL4Q9UJ04 414 aa10.27□□□□□ -0.77
SEMA3F-209ENST00000493743 LRRC37AA6NMS7 1700 aa10.27□□□□□ -0.77
SEMA3F-209ENST00000493743 PCNTO95613 3336 aa10.27□□□□□ -0.77
SEMA3F-209ENST00000493743 THSD7BQ9C0I4 1608 aa10.26□□□□□ -0.77
SEMA3F-209ENST00000493743 PPEF1O14829 653 aaPredicted RBP10.26□□□□□ -0.77
SEMA3F-209ENST00000493743 BABAM1Q9NWV8 329 aa10.26□□□□□ -0.77
SEMA3F-209ENST00000493743 TULP1O00294 542 aaPredicted RBP10.25□□□□□ -0.77
SEMA3F-209ENST00000493743 EIF2S2P20042 333 aaKnown RBP10.25□□□□□ -0.77
SEMA3F-209ENST00000493743 LMOD1P29536 600 aaPredicted RBP10.25□□□□□ -0.77
SEMA3F-209ENST00000493743 RIPK4P57078 832 aa10.25□□□□□ -0.77
SEMA3F-209ENST00000493743 LMOD3Q0VAK6 560 aa10.25□□□□□ -0.77
SEMA3F-209ENST00000493743 MAP1SQ66K74 1059 aaPredicted RBP10.25□□□□□ -0.77
SEMA3F-209ENST00000493743 DIEXFQ68CQ4 756 aaKnown RBP10.25□□□□□ -0.77
SEMA3F-209ENST00000493743 LRP10Q7Z4F1 713 aa10.25□□□□□ -0.77
SEMA3F-209ENST00000493743 CNTROBQ8N137 903 aa10.25□□□□□ -0.77
SEMA3F-209ENST00000493743 LARGE2Q8N3Y3 721 aa10.25□□□□□ -0.77
SEMA3F-209ENST00000493743 NLRP3Q96P20 1036 aa10.25□□□□□ -0.77
SEMA3F-209ENST00000493743 TMX4Q9H1E5 349 aaPredicted RBP10.25□□□□□ -0.77
SEMA3F-209ENST00000493743 GJA3Q9Y6H8 435 aa10.25□□□□□ -0.77
SEMA3F-209ENST00000493743 TCERG1O14776 1098 aaKnown RBP10.24□□□□□ -0.77
SEMA3F-209ENST00000493743 VEGFBP49765 207 aa10.24□□□□□ -0.77
SEMA3F-209ENST00000493743 PDIA6Q15084 440 aa10.24□□□□□ -0.77
SEMA3F-209ENST00000493743 RALBP1Q15311 655 aa10.24□□□□□ -0.77
SEMA3F-209ENST00000493743 HSP90AB3PQ58FF7 597 aa10.24□□□□□ -0.77
SEMA3F-209ENST00000493743 C3orf67Q6ZVT6 689 aa10.24□□□□□ -0.77
SEMA3F-209ENST00000493743 NIM1KQ8IY84 436 aa10.24□□□□□ -0.77
SEMA3F-209ENST00000493743 UTP14AQ9BVJ6 771 aaKnown RBP10.24□□□□□ -0.77
SEMA3F-209ENST00000493743 RASSF10A6NK89 507 aa10.23□□□□□ -0.77
SEMA3F-209ENST00000493743 FOXN1O15353 648 aa10.23□□□□□ -0.77
SEMA3F-209ENST00000493743 PPIP5K2O43314 1243 aa10.23□□□□□ -0.77
SEMA3F-209ENST00000493743 ANXA1P04083 346 aa10.23□□□□□ -0.77
SEMA3F-209ENST00000493743 TMPOP42166 694 aaKnown RBP10.23□□□□□ -0.77
SEMA3F-209ENST00000493743 SCNN1DP51172 638 aa10.23□□□□□ -0.77
SEMA3F-209ENST00000493743 PROSER3Q2NL68 480 aa10.23□□□□□ -0.77
SEMA3F-209ENST00000493743 SLC10A5Q5PT55 438 aa10.23□□□□□ -0.77
SEMA3F-209ENST00000493743 AIDAQ96BJ3 306 aa10.23□□□□□ -0.77
SEMA3F-209ENST00000493743 VPS33BQ9H267 617 aa10.23□□□□□ -0.77
SEMA3F-209ENST00000493743 ATP6V0A2Q9Y487 856 aa10.23□□□□□ -0.77
SEMA3F-209ENST00000493743 ABCC4O15439 1325 aa10.23□□□□□ -0.77
SEMA3F-209ENST00000493743 CTCFP49711 727 aaPredicted RBP10.22□□□□□ -0.77
SEMA3F-209ENST00000493743 DEFB115Q30KQ5 88 aa10.22□□□□□ -0.77
SEMA3F-209ENST00000493743 USP50Q70EL3 339 aaPredicted RBP10.22□□□□□ -0.77
SEMA3F-209ENST00000493743 SLC51AQ86UW1 340 aa10.22□□□□□ -0.77
SEMA3F-209ENST00000493743 SUPT20HQ8NEM7 779 aa10.22□□□□□ -0.77
SEMA3F-209ENST00000493743 PRDM10Q9NQV6 1147 aa10.22□□□□□ -0.77
SEMA3F-209ENST00000493743 ABT1Q9ULW3 272 aaKnown RBP10.22□□□□□ -0.77
SEMA3F-209ENST00000493743 POLR2AP24928 1970 aaKnown RBP10.22□□□□□ -0.77
SEMA3F-209ENST00000493743 DUOX1Q9NRD9 1551 aa10.22□□□□□ -0.77
SEMA3F-209ENST00000493743 BBOX1O75936 387 aa10.21□□□□□ -0.77
SEMA3F-209ENST00000493743 EPS15P42566 896 aa10.21□□□□□ -0.77
SEMA3F-209ENST00000493743 AIMP1Q12904 312 aaKnown RBP10.21□□□□□ -0.77
SEMA3F-209ENST00000493743 AOC3Q16853 763 aa10.21□□□□□ -0.77
SEMA3F-209ENST00000493743 COPS6Q7L5N1 327 aa10.21□□□□□ -0.77
SEMA3F-209ENST00000493743 NLRP10Q86W26 655 aa10.21□□□□□ -0.77
SEMA3F-209ENST00000493743 XAGE3Q8WTP9 111 aa10.21□□□□□ -0.77
SEMA3F-209ENST00000493743 NECTIN2Q92692 538 aa10.21□□□□□ -0.77
SEMA3F-209ENST00000493743 RTFDC1Q9BY42 306 aaPredicted RBP10.21□□□□□ -0.77
SEMA3F-209ENST00000493743 DDX21Q9NR30 783 aaKnown RBP eCLIP10.21□□□□□ -0.77
SEMA3F-209ENST00000493743 WBP1LQ9NX94 342 aa10.21□□□□□ -0.77
SEMA3F-209ENST00000493743 MYBBP1AQ9BQG0 1328 aaKnown RBP10.21□□□□□ -0.78
SEMA3F-209ENST00000493743 TCIRG1Q13488 830 aa10.2□□□□□ -0.78
SEMA3F-209ENST00000493743 PSME4Q14997 1843 aa10.2□□□□□ -0.78
SEMA3F-209ENST00000493743 NEUROD2Q15784 382 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms