RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 ERBB4Q15303 1308 aa22.91■■□□□ 1.26
COL9A1-210ENST00000493682 EAPPQ56P03 285 aaPredicted RBP22.91■■□□□ 1.26
COL9A1-210ENST00000493682 CC2D2BQ6DHV5 1058 aa22.91■■□□□ 1.26
COL9A1-210ENST00000493682 ZNF34Q8IZ26 560 aa22.91■■□□□ 1.26
COL9A1-210ENST00000493682 EPHX2P34913 555 aa22.9■■□□□ 1.26
COL9A1-210ENST00000493682 GIGYF2Q6Y7W6 1299 aaKnown RBP22.9■■□□□ 1.26
COL9A1-210ENST00000493682 TSPYL4Q9UJ04 414 aa22.9■■□□□ 1.26
COL9A1-210ENST00000493682 RNF123Q5XPI4 1314 aa22.89■■□□□ 1.26
COL9A1-210ENST00000493682 NTSR2O95665 410 aa22.89■■□□□ 1.25
COL9A1-210ENST00000493682 ITGBL1O95965 494 aaPredicted RBP22.89■■□□□ 1.25
COL9A1-210ENST00000493682 GPC2Q8N158 579 aa22.89■■□□□ 1.25
COL9A1-210ENST00000493682 JDP2Q8WYK2 163 aa22.89■■□□□ 1.25
COL9A1-210ENST00000493682 LRP10Q7Z4F1 713 aa22.88■■□□□ 1.25
COL9A1-210ENST00000493682 CLEC11AQ9Y240 323 aa22.88■■□□□ 1.25
COL9A1-210ENST00000493682 CNTNAP1P78357 1384 aa22.88■■□□□ 1.25
COL9A1-210ENST00000493682 RIPK4P57078 832 aa22.87■■□□□ 1.25
COL9A1-210ENST00000493682 PDIA6Q15084 440 aa22.87■■□□□ 1.25
COL9A1-210ENST00000493682 C3orf67Q6ZVT6 689 aa22.87■■□□□ 1.25
COL9A1-210ENST00000493682 PNMA8AQ86V59 439 aaPredicted RBP22.87■■□□□ 1.25
COL9A1-210ENST00000493682 RBM17Q96I25 401 aaKnown RBP22.87■■□□□ 1.25
COL9A1-210ENST00000493682 CRAMP1Q96RY5 1269 aa22.87■■□□□ 1.25
COL9A1-210ENST00000493682 COL4A5P29400 1685 aa22.87■■□□□ 1.25
COL9A1-210ENST00000493682 ADAMTSL1Q8N6G6 1762 aa22.86■■□□□ 1.25
COL9A1-210ENST00000493682 TMEM88BA6NKF7 163 aa22.86■■□□□ 1.25
COL9A1-210ENST00000493682 EIF2S2P20042 333 aaKnown RBP22.86■■□□□ 1.25
COL9A1-210ENST00000493682 PPP1R42Q7Z4L9 355 aa22.86■■□□□ 1.25
COL9A1-210ENST00000493682 SLC51AQ86UW1 340 aa22.86■■□□□ 1.25
COL9A1-210ENST00000493682 CAPN15O75808 1086 aa22.85■■□□□ 1.25
COL9A1-210ENST00000493682 GRIPAP1Q4V328 841 aa22.85■■□□□ 1.25
COL9A1-210ENST00000493682 PARP10Q53GL7 1025 aa22.85■■□□□ 1.25
COL9A1-210ENST00000493682 TCERG1O14776 1098 aaKnown RBP22.84■■□□□ 1.25
COL9A1-210ENST00000493682 PPEF1O14829 653 aaPredicted RBP22.84■■□□□ 1.25
COL9A1-210ENST00000493682 EIF6P56537 245 aaKnown RBP22.84■■□□□ 1.25
COL9A1-210ENST00000493682 PROSER3Q2NL68 480 aa22.84■■□□□ 1.25
COL9A1-210ENST00000493682 BABAM1Q9NWV8 329 aa22.84■■□□□ 1.25
COL9A1-210ENST00000493682 ANXA1P04083 346 aa22.83■■□□□ 1.25
COL9A1-210ENST00000493682 TMPOP42166 694 aaKnown RBP22.83■■□□□ 1.25
COL9A1-210ENST00000493682 RALBP1Q15311 655 aa22.83■■□□□ 1.25
COL9A1-210ENST00000493682 MAP1SQ66K74 1059 aaPredicted RBP22.83■■□□□ 1.25
COL9A1-210ENST00000493682 CNTROBQ8N137 903 aa22.83■■□□□ 1.25
COL9A1-210ENST00000493682 LARGE2Q8N3Y3 721 aa22.83■■□□□ 1.25
COL9A1-210ENST00000493682 NLRP3Q96P20 1036 aa22.83■■□□□ 1.25
COL9A1-210ENST00000493682 GJA3Q9Y6H8 435 aa22.83■■□□□ 1.25
COL9A1-210ENST00000493682 SLC10A5Q5PT55 438 aa22.82■■□□□ 1.24
COL9A1-210ENST00000493682 UTP14AQ9BVJ6 771 aaKnown RBP22.82■■□□□ 1.24
COL9A1-210ENST00000493682 VEGFBP49765 207 aa22.81■■□□□ 1.24
COL9A1-210ENST00000493682 LMOD3Q0VAK6 560 aa22.81■■□□□ 1.24
COL9A1-210ENST00000493682 LMOD1P29536 600 aaPredicted RBP22.79■■□□□ 1.24
COL9A1-210ENST00000493682 NECTIN2Q92692 538 aa22.79■■□□□ 1.24
COL9A1-210ENST00000493682 ATP6V0A2Q9Y487 856 aa22.79■■□□□ 1.24
COL9A1-210ENST00000493682 FOXN1O15353 648 aa22.78■■□□□ 1.24
COL9A1-210ENST00000493682 SCNN1DP51172 638 aa22.78■■□□□ 1.24
COL9A1-210ENST00000493682 LTBP1Q14766 1721 aa22.78■■□□□ 1.24
COL9A1-210ENST00000493682 COPS6Q7L5N1 327 aa22.78■■□□□ 1.24
COL9A1-210ENST00000493682 NIM1KQ8IY84 436 aa22.78■■□□□ 1.24
COL9A1-210ENST00000493682 ABCC4O15439 1325 aa22.78■■□□□ 1.24
COL9A1-210ENST00000493682 PPIP5K2O43314 1243 aa22.77■■□□□ 1.24
COL9A1-210ENST00000493682 EPS15P42566 896 aa22.77■■□□□ 1.24
COL9A1-210ENST00000493682 AIMP1Q12904 312 aaKnown RBP22.77■■□□□ 1.24
COL9A1-210ENST00000493682 PPP4R3CPQ6ZMV5 832 aa22.77■■□□□ 1.24
COL9A1-210ENST00000493682 XAGE3Q8WTP9 111 aa22.77■■□□□ 1.24
COL9A1-210ENST00000493682 TMX4Q9H1E5 349 aaPredicted RBP22.77■■□□□ 1.24
COL9A1-210ENST00000493682 HSP90AB3PQ58FF7 597 aa22.76■■□□□ 1.23
COL9A1-210ENST00000493682 NLRP10Q86W26 655 aa22.76■■□□□ 1.23
COL9A1-210ENST00000493682 RASSF10A6NK89 507 aa22.75■■□□□ 1.23
COL9A1-210ENST00000493682 HCLS1P14317 486 aaPredicted RBP22.75■■□□□ 1.23
COL9A1-210ENST00000493682 NEUROD2Q15784 382 aa22.75■■□□□ 1.23
COL9A1-210ENST00000493682 AOC3Q16853 763 aa22.75■■□□□ 1.23
COL9A1-210ENST00000493682 KRT24Q2M2I5 525 aa22.75■■□□□ 1.23
COL9A1-210ENST00000493682 DEFB115Q30KQ5 88 aa22.75■■□□□ 1.23
COL9A1-210ENST00000493682 CCDC146Q8IYE0 955 aa22.75■■□□□ 1.23
COL9A1-210ENST00000493682 VPS33BQ9H267 617 aa22.75■■□□□ 1.23
COL9A1-210ENST00000493682 CHL1O00533 1208 aa22.74■■□□□ 1.23
COL9A1-210ENST00000493682 BBOX1O75936 387 aa22.74■■□□□ 1.23
COL9A1-210ENST00000493682 TCIRG1Q13488 830 aa22.74■■□□□ 1.23
COL9A1-210ENST00000493682 DDX21Q9NR30 783 aaKnown RBP eCLIP22.74■■□□□ 1.23
COL9A1-210ENST00000493682 USP50Q70EL3 339 aaPredicted RBP22.73■■□□□ 1.23
COL9A1-210ENST00000493682 SUPT20HQ8NEM7 779 aa22.73■■□□□ 1.23
COL9A1-210ENST00000493682 AIDAQ96BJ3 306 aa22.73■■□□□ 1.23
COL9A1-210ENST00000493682 RTFDC1Q9BY42 306 aaPredicted RBP22.73■■□□□ 1.23
COL9A1-210ENST00000493682 ABT1Q9ULW3 272 aaKnown RBP22.73■■□□□ 1.23
COL9A1-210ENST00000493682 MYBBP1AQ9BQG0 1328 aaKnown RBP22.73■■□□□ 1.23
COL9A1-210ENST00000493682 ANKRD36CQ5JPF3 1778 aa22.73■■□□□ 1.23
COL9A1-210ENST00000493682 SP8Q8IXZ3 490 aa22.72■■□□□ 1.23
COL9A1-210ENST00000493682 PRDM10Q9NQV6 1147 aa22.72■■□□□ 1.23
COL9A1-210ENST00000493682 WBP1LQ9NX94 342 aa22.72■■□□□ 1.23
COL9A1-210ENST00000493682 TRMT112Q9UI30 125 aaKnown RBP22.72■■□□□ 1.23
COL9A1-210ENST00000493682 ZNRF3Q9ULT6 936 aa22.72■■□□□ 1.23
COL9A1-210ENST00000493682 TRIM35Q9UPQ4 493 aa22.72■■□□□ 1.23
COL9A1-210ENST00000493682 LAS1LQ9Y4W2 734 aaKnown RBP22.72■■□□□ 1.23
COL9A1-210ENST00000493682 SH3TC1Q8TE82 1336 aa22.72■■□□□ 1.23
COL9A1-210ENST00000493682 LAMB2P55268 1798 aa22.71■■□□□ 1.23
COL9A1-210ENST00000493682 CTCFP49711 727 aaPredicted RBP22.71■■□□□ 1.23
COL9A1-210ENST00000493682 FMR1Q06787 632 aaKnown RBP eCLIP22.71■■□□□ 1.23
COL9A1-210ENST00000493682 CXCL9Q07325 125 aa22.71■■□□□ 1.23
COL9A1-210ENST00000493682 DDX10Q13206 875 aaKnown RBP22.71■■□□□ 1.23
COL9A1-210ENST00000493682 DPP8Q6V1X1 898 aaPredicted RBP22.71■■□□□ 1.23
COL9A1-210ENST00000493682 GPRC5DQ9NZD1 345 aa22.71■■□□□ 1.23
COL9A1-210ENST00000493682 CHPF2Q9P2E5 772 aa22.71■■□□□ 1.23
COL9A1-210ENST00000493682 DDX46Q7L014 1031 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms