RNA–Protein interactions for RNA: ENST00000493247.1

MBP-222, Transcript of myelin basic protein, human

TSL 3

Gene MBP, Length 876 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBP-222	ENST00000493247	PCNT	O95613	3336 aa		28.76	■■■□□ 2.19
MBP-222	ENST00000493247	RIC1	Q4ADV7	1423 aa		28.76	■■■□□ 2.19
MBP-222	ENST00000493247	PROSER3	Q2NL68	480 aa		28.75	■■■□□ 2.19
MBP-222	ENST00000493247	CC2D2B	Q6DHV5	1058 aa		28.75	■■■□□ 2.19
MBP-222	ENST00000493247	CREBZF	Q9NS37	354 aa		28.75	■■■□□ 2.19
MBP-222	ENST00000493247	SCN4A	P35499	1836 aa		28.75	■■■□□ 2.19
MBP-222	ENST00000493247	ANXA1	P04083	346 aa		28.74	■■■□□ 2.19
MBP-222	ENST00000493247	C3orf67	Q6ZVT6	689 aa		28.74	■■■□□ 2.19
MBP-222	ENST00000493247	PPP1R42	Q7Z4L9	355 aa		28.73	■■■□□ 2.19
MBP-222	ENST00000493247	RBM17	Q96I25	401 aa	Known RBP	28.73	■■■□□ 2.19
MBP-222	ENST00000493247	CRAMP1	Q96RY5	1269 aa		28.73	■■■□□ 2.19
MBP-222	ENST00000493247	HACL1	Q9UJ83	578 aa		28.73	■■■□□ 2.19
MBP-222	ENST00000493247	LMOD3	Q0VAK6	560 aa		28.72	■■■□□ 2.19
MBP-222	ENST00000493247	DDX10	Q13206	875 aa	Known RBP	28.72	■■■□□ 2.19
MBP-222	ENST00000493247	PARP10	Q53GL7	1025 aa		28.72	■■■□□ 2.19
MBP-222	ENST00000493247	SLC51A	Q86UW1	340 aa		28.72	■■■□□ 2.19
MBP-222	ENST00000493247	PASK	Q96RG2	1323 aa		28.71	■■■□□ 2.19
MBP-222	ENST00000493247	HSPA1A	P0DMV8	641 aa	Known RBP	28.71	■■■□□ 2.19
MBP-222	ENST00000493247	HSPA1B	P0DMV9	641 aa	Known RBP	28.71	■■■□□ 2.19
MBP-222	ENST00000493247	EAPP	Q56P03	285 aa	Predicted RBP	28.71	■■■□□ 2.19
MBP-222	ENST00000493247	JDP2	Q8WYK2	163 aa		28.71	■■■□□ 2.19
MBP-222	ENST00000493247	EPHX2	P34913	555 aa		28.7	■■■□□ 2.18
MBP-222	ENST00000493247	CCDC146	Q8IYE0	955 aa		28.7	■■■□□ 2.18
MBP-222	ENST00000493247	NECTIN2	Q92692	538 aa		28.7	■■■□□ 2.18
MBP-222	ENST00000493247	MKRN1	Q9UHC7	482 aa	Known RBP	28.7	■■■□□ 2.18
MBP-222	ENST00000493247	TCERG1	O14776	1098 aa	Known RBP	28.69	■■■□□ 2.18
MBP-222	ENST00000493247	ITGBL1	O95965	494 aa	Predicted RBP	28.69	■■■□□ 2.18
MBP-222	ENST00000493247	NEUROD2	Q15784	382 aa		28.69	■■■□□ 2.18
MBP-222	ENST00000493247	SLC10A5	Q5PT55	438 aa		28.69	■■■□□ 2.18
MBP-222	ENST00000493247	GPC2	Q8N158	579 aa		28.69	■■■□□ 2.18
MBP-222	ENST00000493247	NLRP3	Q96P20	1036 aa		28.69	■■■□□ 2.18
MBP-222	ENST00000493247	UTP14A	Q9BVJ6	771 aa	Known RBP	28.69	■■■□□ 2.18
MBP-222	ENST00000493247	RNF123	Q5XPI4	1314 aa		28.69	■■■□□ 2.18
MBP-222	ENST00000493247	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.69	■■■□□ 2.18
MBP-222	ENST00000493247	PPEF1	O14829	653 aa	Predicted RBP	28.68	■■■□□ 2.18
MBP-222	ENST00000493247	GRIPAP1	Q4V328	841 aa		28.68	■■■□□ 2.18
MBP-222	ENST00000493247	COPS6	Q7L5N1	327 aa		28.68	■■■□□ 2.18
MBP-222	ENST00000493247	CLEC11A	Q9Y240	323 aa		28.68	■■■□□ 2.18
MBP-222	ENST00000493247	COL4A5	P29400	1685 aa		28.67	■■■□□ 2.18
MBP-222	ENST00000493247	CHL1	O00533	1208 aa		28.66	■■■□□ 2.18
MBP-222	ENST00000493247	EIF6	P56537	245 aa	Known RBP	28.66	■■■□□ 2.18
MBP-222	ENST00000493247	AIMP1	Q12904	312 aa	Known RBP	28.66	■■■□□ 2.18
MBP-222	ENST00000493247	KRT24	Q2M2I5	525 aa		28.66	■■■□□ 2.18
MBP-222	ENST00000493247	XAGE3	Q8WTP9	111 aa		28.66	■■■□□ 2.18
MBP-222	ENST00000493247	PNMA8A	Q86V59	439 aa	Predicted RBP	28.65	■■■□□ 2.18
MBP-222	ENST00000493247	TRIM35	Q9UPQ4	493 aa		28.65	■■■□□ 2.18
MBP-222	ENST00000493247	GJA3	Q9Y6H8	435 aa		28.65	■■■□□ 2.18
MBP-222	ENST00000493247	LARGE2	Q8N3Y3	721 aa		28.64	■■■□□ 2.18
MBP-222	ENST00000493247	RUNDC1	Q96C34	613 aa		28.64	■■■□□ 2.18
MBP-222	ENST00000493247	ADAMTSL1	Q8N6G6	1762 aa		28.63	■■■□□ 2.17
MBP-222	ENST00000493247	NLRP10	Q86W26	655 aa		28.63	■■■□□ 2.17
MBP-222	ENST00000493247	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.63	■■■□□ 2.17
MBP-222	ENST00000493247	LAS1L	Q9Y4W2	734 aa	Known RBP	28.63	■■■□□ 2.17
MBP-222	ENST00000493247	HSP90AB3P	Q58FF7	597 aa		28.62	■■■□□ 2.17
MBP-222	ENST00000493247	ATP6V0A2	Q9Y487	856 aa		28.62	■■■□□ 2.17
MBP-222	ENST00000493247	CNTNAP1	P78357	1384 aa		28.62	■■■□□ 2.17
MBP-222	ENST00000493247	TMEM88B	A6NKF7	163 aa		28.61	■■■□□ 2.17
MBP-222	ENST00000493247	TCIRG1	Q13488	830 aa		28.61	■■■□□ 2.17
MBP-222	ENST00000493247	MAP1S	Q66K74	1059 aa	Predicted RBP	28.61	■■■□□ 2.17
MBP-222	ENST00000493247	TNS4	Q8IZW8	715 aa		28.61	■■■□□ 2.17
MBP-222	ENST00000493247	CNTROB	Q8N137	903 aa		28.61	■■■□□ 2.17
MBP-222	ENST00000493247	ABCC4	O15439	1325 aa		28.61	■■■□□ 2.17
MBP-222	ENST00000493247	HCLS1	P14317	486 aa	Predicted RBP	28.6	■■■□□ 2.17
MBP-222	ENST00000493247	WDR43	Q15061	677 aa	Known RBP eCLIP	28.6	■■■□□ 2.17
MBP-222	ENST00000493247	ADAMTS8	Q9UP79	889 aa		28.6	■■■□□ 2.17
MBP-222	ENST00000493247	NIM1K	Q8IY84	436 aa		28.58	■■■□□ 2.17
MBP-222	ENST00000493247	TMX4	Q9H1E5	349 aa	Predicted RBP	28.58	■■■□□ 2.17
MBP-222	ENST00000493247	PPIP5K2	O43314	1243 aa		28.57	■■■□□ 2.16
MBP-222	ENST00000493247	BBOX1	O75936	387 aa		28.57	■■■□□ 2.16
MBP-222	ENST00000493247	LMOD1	P29536	600 aa	Predicted RBP	28.57	■■■□□ 2.16
MBP-222	ENST00000493247	EPS15	P42566	896 aa		28.57	■■■□□ 2.16
MBP-222	ENST00000493247	SCNN1D	P51172	638 aa		28.57	■■■□□ 2.16
MBP-222	ENST00000493247	AOC3	Q16853	763 aa		28.57	■■■□□ 2.16
MBP-222	ENST00000493247	CHPF2	Q9P2E5	772 aa		28.57	■■■□□ 2.16
MBP-222	ENST00000493247	TRMT112	Q9UI30	125 aa	Known RBP	28.57	■■■□□ 2.16
MBP-222	ENST00000493247	LTBP1	Q14766	1721 aa		28.57	■■■□□ 2.16
MBP-222	ENST00000493247	ANKRD36C	Q5JPF3	1778 aa		28.56	■■■□□ 2.16
MBP-222	ENST00000493247	VPS33B	Q9H267	617 aa		28.56	■■■□□ 2.16
MBP-222	ENST00000493247	VEGFB	P49765	207 aa		28.55	■■■□□ 2.16
MBP-222	ENST00000493247	SP8	Q8IXZ3	490 aa		28.55	■■■□□ 2.16
MBP-222	ENST00000493247	RTFDC1	Q9BY42	306 aa	Predicted RBP	28.55	■■■□□ 2.16
MBP-222	ENST00000493247	SH3TC1	Q8TE82	1336 aa		28.54	■■■□□ 2.16
MBP-222	ENST00000493247	HDGFL1	Q5TGJ6	251 aa		28.54	■■■□□ 2.16
MBP-222	ENST00000493247	ZNF428	Q96B54	188 aa		28.54	■■■□□ 2.16
MBP-222	ENST00000493247	DDX46	Q7L014	1031 aa	Known RBP	28.53	■■■□□ 2.16
MBP-222	ENST00000493247	SUPT20H	Q8NEM7	779 aa		28.53	■■■□□ 2.16
MBP-222	ENST00000493247	LAMB2	P55268	1798 aa		28.52	■■■□□ 2.16
MBP-222	ENST00000493247	HOXB7	P09629	217 aa		28.52	■■■□□ 2.16
MBP-222	ENST00000493247	DPP8	Q6V1X1	898 aa	Predicted RBP	28.52	■■■□□ 2.16
MBP-222	ENST00000493247	MPND	Q8N594	471 aa		28.52	■■■□□ 2.16
MBP-222	ENST00000493247	PLBD2	Q8NHP8	589 aa		28.52	■■■□□ 2.16
MBP-222	ENST00000493247	CAPN15	O75808	1086 aa		28.51	■■■□□ 2.15
MBP-222	ENST00000493247	GRAP	Q13588	217 aa		28.51	■■■□□ 2.15
MBP-222	ENST00000493247	ANKRD13D	Q6ZTN6	518 aa		28.51	■■■□□ 2.15
MBP-222	ENST00000493247	GRAPL	Q8TC17	118 aa	Predicted RBP	28.51	■■■□□ 2.15
MBP-222	ENST00000493247	CFAP44	Q96MT7	982 aa		28.51	■■■□□ 2.15
MBP-222	ENST00000493247	ZNRF3	Q9ULT6	936 aa		28.51	■■■□□ 2.15
MBP-222	ENST00000493247	FOXN1	O15353	648 aa		28.5	■■■□□ 2.15
MBP-222	ENST00000493247	CXCL9	Q07325	125 aa		28.5	■■■□□ 2.15
MBP-222	ENST00000493247	USP50	Q70EL3	339 aa	Predicted RBP	28.5	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms