RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 HOXA10P31260 410 aaPredicted RBP19.11■□□□□ 0.65
SS18L1-205ENST00000492466 GIGYF2Q6Y7W6 1299 aaKnown RBP19.11■□□□□ 0.65
SS18L1-205ENST00000492466 KIF6Q6ZMV9 814 aa19.11■□□□□ 0.65
SS18L1-205ENST00000492466 RTKN2Q8IZC4 609 aa19.11■□□□□ 0.65
SS18L1-205ENST00000492466 FAM9BQ8IZU0 186 aa19.11■□□□□ 0.65
SS18L1-205ENST00000492466 BABAM1Q9NWV8 329 aa19.11■□□□□ 0.65
SS18L1-205ENST00000492466 ZNF541Q9H0D2 1346 aa19.1■□□□□ 0.65
SS18L1-205ENST00000492466 NTSR2O95665 410 aa19.1■□□□□ 0.65
SS18L1-205ENST00000492466 PROSER3Q2NL68 480 aa19.1■□□□□ 0.65
SS18L1-205ENST00000492466 SLC51AQ86UW1 340 aa19.1■□□□□ 0.65
SS18L1-205ENST00000492466 CALD1Q05682 793 aaKnown RBP19.09■□□□□ 0.65
SS18L1-205ENST00000492466 C3orf67Q6ZVT6 689 aa19.09■□□□□ 0.65
SS18L1-205ENST00000492466 SYNE4Q8N205 404 aa19.09■□□□□ 0.65
SS18L1-205ENST00000492466 FZD9O00144 591 aa19.08■□□□□ 0.64
SS18L1-205ENST00000492466 ANXA1P04083 346 aa19.08■□□□□ 0.64
SS18L1-205ENST00000492466 CHADLQ6NUI6 762 aa19.08■□□□□ 0.64
SS18L1-205ENST00000492466 TAF1DQ9H5J8 278 aaPredicted RBP19.08■□□□□ 0.64
SS18L1-205ENST00000492466 COL4A5P29400 1685 aa19.08■□□□□ 0.64
SS18L1-205ENST00000492466 SCN4AP35499 1836 aa19.07■□□□□ 0.64
SS18L1-205ENST00000492466 EIF2S2P20042 333 aaKnown RBP19.07■□□□□ 0.64
SS18L1-205ENST00000492466 IARSP41252 1262 aaKnown RBP19.07■□□□□ 0.64
SS18L1-205ENST00000492466 PSMD1Q99460 953 aa19.07■□□□□ 0.64
SS18L1-205ENST00000492466 TRIM35Q9UPQ4 493 aa19.07■□□□□ 0.64
SS18L1-205ENST00000492466 CHL1O00533 1208 aa19.06■□□□□ 0.64
SS18L1-205ENST00000492466 IQCA1LA6NCM1 817 aa19.05■□□□□ 0.64
SS18L1-205ENST00000492466 KRT24Q2M2I5 525 aa19.05■□□□□ 0.64
SS18L1-205ENST00000492466 SLC10A5Q5PT55 438 aa19.05■□□□□ 0.64
SS18L1-205ENST00000492466 CRAMP1Q96RY5 1269 aa19.05■□□□□ 0.64
SS18L1-205ENST00000492466 PASKQ96RG2 1323 aa19.04■□□□□ 0.64
SS18L1-205ENST00000492466 PARP10Q53GL7 1025 aa19.04■□□□□ 0.64
SS18L1-205ENST00000492466 COL13A1Q5TAT6 717 aaPredicted RBP19.04■□□□□ 0.64
SS18L1-205ENST00000492466 CC2D2BQ6DHV5 1058 aa19.04■□□□□ 0.64
SS18L1-205ENST00000492466 LDHDQ86WU2 507 aa19.04■□□□□ 0.64
SS18L1-205ENST00000492466 ITGBL1O95965 494 aaPredicted RBP19.03■□□□□ 0.64
SS18L1-205ENST00000492466 DIEXFQ68CQ4 756 aaKnown RBP19.03■□□□□ 0.64
SS18L1-205ENST00000492466 COPS6Q7L5N1 327 aa19.03■□□□□ 0.64
SS18L1-205ENST00000492466 PPP1R42Q7Z4L9 355 aa19.03■□□□□ 0.64
SS18L1-205ENST00000492466 RPGRQ92834 1020 aaKnown RBP19.03■□□□□ 0.64
SS18L1-205ENST00000492466 CREBZFQ9NS37 354 aa19.03■□□□□ 0.64
SS18L1-205ENST00000492466 SALL2Q9Y467 1007 aaPredicted RBP19.03■□□□□ 0.64
SS18L1-205ENST00000492466 ADAMTSL1Q8N6G6 1762 aa19.03■□□□□ 0.64
SS18L1-205ENST00000492466 NECTIN2Q92692 538 aa19.02■□□□□ 0.64
SS18L1-205ENST00000492466 RBM17Q96I25 401 aaKnown RBP19.02■□□□□ 0.64
SS18L1-205ENST00000492466 GNAI1P63096 354 aa19.01■□□□□ 0.63
SS18L1-205ENST00000492466 GPC2Q8N158 579 aa19.01■□□□□ 0.63
SS18L1-205ENST00000492466 XAGE3Q8WTP9 111 aa19.01■□□□□ 0.63
SS18L1-205ENST00000492466 UTP14AQ9BVJ6 771 aaKnown RBP19.01■□□□□ 0.63
SS18L1-205ENST00000492466 DDX21Q9NR30 783 aaKnown RBP eCLIP19.01■□□□□ 0.63
SS18L1-205ENST00000492466 HACL1Q9UJ83 578 aa19.01■□□□□ 0.63
SS18L1-205ENST00000492466 RNF123Q5XPI4 1314 aa19■□□□□ 0.63
SS18L1-205ENST00000492466 EPHX2P34913 555 aa19■□□□□ 0.63
SS18L1-205ENST00000492466 GRIPAP1Q4V328 841 aa19■□□□□ 0.63
SS18L1-205ENST00000492466 NLRP10Q86W26 655 aa19■□□□□ 0.63
SS18L1-205ENST00000492466 NLRP3Q96P20 1036 aa19■□□□□ 0.63
SS18L1-205ENST00000492466 ANKRD36CQ5JPF3 1778 aa18.99■□□□□ 0.63
SS18L1-205ENST00000492466 PPEF1O14829 653 aaPredicted RBP18.99■□□□□ 0.63
SS18L1-205ENST00000492466 AIMP1Q12904 312 aaKnown RBP18.99■□□□□ 0.63
SS18L1-205ENST00000492466 TCIRG1Q13488 830 aa18.99■□□□□ 0.63
SS18L1-205ENST00000492466 JDP2Q8WYK2 163 aa18.99■□□□□ 0.63
SS18L1-205ENST00000492466 CFAP44Q96MT7 982 aa18.99■□□□□ 0.63
SS18L1-205ENST00000492466 IFT57Q9NWB7 429 aa18.99■□□□□ 0.63
SS18L1-205ENST00000492466 LTBP1Q14766 1721 aa18.98■□□□□ 0.63
SS18L1-205ENST00000492466 TCERG1O14776 1098 aaKnown RBP18.98■□□□□ 0.63
SS18L1-205ENST00000492466 HSPA1AP0DMV8 641 aaKnown RBP18.98■□□□□ 0.63
SS18L1-205ENST00000492466 HSPA1BP0DMV9 641 aaKnown RBP18.98■□□□□ 0.63
SS18L1-205ENST00000492466 ATP6V0A2Q9Y487 856 aa18.98■□□□□ 0.63
SS18L1-205ENST00000492466 ABCC4O15439 1325 aa18.98■□□□□ 0.63
SS18L1-205ENST00000492466 LAMB2P55268 1798 aa18.97■□□□□ 0.63
SS18L1-205ENST00000492466 EAPPQ56P03 285 aaPredicted RBP18.97■□□□□ 0.63
SS18L1-205ENST00000492466 HSP90AB3PQ58FF7 597 aa18.97■□□□□ 0.63
SS18L1-205ENST00000492466 MBIPQ9NS73 344 aa18.97■□□□□ 0.63
SS18L1-205ENST00000492466 CHPF2Q9P2E5 772 aa18.97■□□□□ 0.63
SS18L1-205ENST00000492466 MKRN1Q9UHC7 482 aaKnown RBP18.97■□□□□ 0.63
SS18L1-205ENST00000492466 CCER2I3L3R5 266 aa18.96■□□□□ 0.63
SS18L1-205ENST00000492466 HCLS1P14317 486 aaPredicted RBP18.96■□□□□ 0.63
SS18L1-205ENST00000492466 SCNN1DP51172 638 aa18.96■□□□□ 0.63
SS18L1-205ENST00000492466 PNMA8AQ86V59 439 aaPredicted RBP18.96■□□□□ 0.63
SS18L1-205ENST00000492466 LARGE2Q8N3Y3 721 aa18.96■□□□□ 0.63
SS18L1-205ENST00000492466 RTFDC1Q9BY42 306 aaPredicted RBP18.96■□□□□ 0.63
SS18L1-205ENST00000492466 CNTNAP1P78357 1384 aa18.95■□□□□ 0.62
SS18L1-205ENST00000492466 CCDC27Q2M243 656 aa18.95■□□□□ 0.62
SS18L1-205ENST00000492466 WWC1Q8IX03 1113 aa18.95■□□□□ 0.62
SS18L1-205ENST00000492466 HOXB7P09629 217 aa18.94■□□□□ 0.62
SS18L1-205ENST00000492466 ZNF853P0CG23 659 aa18.94■□□□□ 0.62
SS18L1-205ENST00000492466 EIF6P56537 245 aaKnown RBP18.94■□□□□ 0.62
SS18L1-205ENST00000492466 HDGFL1Q5TGJ6 251 aa18.94■□□□□ 0.62
SS18L1-205ENST00000492466 MAP1SQ66K74 1059 aaPredicted RBP18.94■□□□□ 0.62
SS18L1-205ENST00000492466 CNTROBQ8N137 903 aa18.94■□□□□ 0.62
SS18L1-205ENST00000492466 GJA3Q9Y6H8 435 aa18.94■□□□□ 0.62
SS18L1-205ENST00000492466 TMEM88BA6NKF7 163 aa18.93■□□□□ 0.62
SS18L1-205ENST00000492466 BBOX1O75936 387 aa18.93■□□□□ 0.62
SS18L1-205ENST00000492466 EPS15P42566 896 aa18.93■□□□□ 0.62
SS18L1-205ENST00000492466 AOC3Q16853 763 aa18.93■□□□□ 0.62
SS18L1-205ENST00000492466 SP8Q8IXZ3 490 aa18.93■□□□□ 0.62
SS18L1-205ENST00000492466 PLBD2Q8NHP8 589 aa18.93■□□□□ 0.62
SS18L1-205ENST00000492466 ISCA1Q9BUE6 129 aa18.93■□□□□ 0.62
SS18L1-205ENST00000492466 VPS33BQ9H267 617 aa18.93■□□□□ 0.62
SS18L1-205ENST00000492466 TRMT112Q9UI30 125 aaKnown RBP18.93■□□□□ 0.62
SS18L1-205ENST00000492466 CLEC11AQ9Y240 323 aa18.93■□□□□ 0.62
SS18L1-205ENST00000492466 SH3TC1Q8TE82 1336 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms