RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 SYTL4Q96C24 671 aaPredicted RBP18.08■□□□□ 0.49
TNFRSF1B-203ENST00000492361 HTATSF1O43719 755 aaKnown RBP18.08■□□□□ 0.48
TNFRSF1B-203ENST00000492361 STAP2Q9UGK3 403 aa18.08■□□□□ 0.48
TNFRSF1B-203ENST00000492361 ZNF589Q86UQ0 364 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 EVI5LQ96CN4 794 aa18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 TNMDQ9H2S6 317 aa18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 CABP4P57796 275 aa18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 KRT85P78386 507 aa18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 LARP1Q6PKG0 1096 aaKnown RBP18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 LUZP1Q86V48 1076 aa18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 BRF1Q92994 677 aa18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 ZNF496Q96IT1 587 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 OFD1O75665 1012 aa18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 TATP17735 454 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 CUL4AQ13619 759 aa18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 EPHA10Q5JZY3 1008 aa18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 DACT1Q9NYF0 836 aa18.07■□□□□ 0.48
TNFRSF1B-203ENST00000492361 ADAMTS13Q76LX8 1427 aa18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 NPHP1O15259 732 aa18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 ZRSR1Q15695 479 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 KCNH5Q8NCM2 988 aa18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 INTS4Q96HW7 963 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 ZNF594Q96JF6 807 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 DBNDD2Q9BQY9 259 aa18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 OVOS2A0A0J9YW53 1432 aa18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 OVOS2Q6IE36 1432 aa18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 LMBR1LQ6UX01 489 aa18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 ERC1Q8IUD2 1116 aa18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 NOL7Q9UMY1 257 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 VIRMAQ69YN4 1812 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 UBE2HP62256 183 aa18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 ANKRD13DQ6ZTN6 518 aa18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 CCDC171Q6TFL3 1326 aa18.06■□□□□ 0.48
TNFRSF1B-203ENST00000492361 SASH1O94885 1247 aa18.05■□□□□ 0.48
TNFRSF1B-203ENST00000492361 PSMA5P28066 241 aa18.05■□□□□ 0.48
TNFRSF1B-203ENST00000492361 APPP05067 770 aa18.05■□□□□ 0.48
TNFRSF1B-203ENST00000492361 TPM2P07951 284 aa18.05■□□□□ 0.48
TNFRSF1B-203ENST00000492361 NUP62CLQ9H1M0 184 aa18.05■□□□□ 0.48
TNFRSF1B-203ENST00000492361 HYPKQ9NX55 129 aa18.05■□□□□ 0.48
TNFRSF1B-203ENST00000492361 LIG1P18858 919 aa18.05■□□□□ 0.48
TNFRSF1B-203ENST00000492361 NCOA5Q9HCD5 579 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1B-203ENST00000492361 SLC27A2O14975 620 aa18.04■□□□□ 0.48
TNFRSF1B-203ENST00000492361 ISM2Q6H9L7 571 aa18.04■□□□□ 0.48
TNFRSF1B-203ENST00000492361 LINS1Q8NG48 757 aa18.04■□□□□ 0.48
TNFRSF1B-203ENST00000492361 RIMS1Q86UR5 1692 aaKnown RBP18.04■□□□□ 0.48
TNFRSF1B-203ENST00000492361 DLC1Q96QB1 1528 aa18.04■□□□□ 0.48
TNFRSF1B-203ENST00000492361 SF3A1Q15459 793 aaKnown RBP18.04■□□□□ 0.48
TNFRSF1B-203ENST00000492361 TOMM22Q9NS69 142 aa18.04■□□□□ 0.48
TNFRSF1B-203ENST00000492361 CSPP1Q1MSJ5 1256 aa18.04■□□□□ 0.48
TNFRSF1B-203ENST00000492361 SASS6Q6UVJ0 657 aa18.04■□□□□ 0.48
TNFRSF1B-203ENST00000492361 HDAC5Q9UQL6 1122 aa18.04■□□□□ 0.48
TNFRSF1B-203ENST00000492361 CHMP4CQ96CF2 233 aa18.03■□□□□ 0.48
TNFRSF1B-203ENST00000492361 KIF20BQ96Q89 1820 aa18.03■□□□□ 0.48
TNFRSF1B-203ENST00000492361 ATF3P18847 181 aa18.03■□□□□ 0.48
TNFRSF1B-203ENST00000492361 CHMP4AQ9BY43 222 aa18.03■□□□□ 0.48
TNFRSF1B-203ENST00000492361 FTOQ9C0B1 505 aaKnown RBP eCLIP18.03■□□□□ 0.48
TNFRSF1B-203ENST00000492361 MTMR6Q9Y217 621 aa18.03■□□□□ 0.48
TNFRSF1B-203ENST00000492361 CDC42BPGQ6DT37 1551 aa18.03■□□□□ 0.48
TNFRSF1B-203ENST00000492361 RRP9O43818 475 aaKnown RBP18.02■□□□□ 0.48
TNFRSF1B-203ENST00000492361 CCDC192P0DO97 292 aa18.02■□□□□ 0.48
TNFRSF1B-203ENST00000492361 OTUD7BQ6GQQ9 843 aa18.02■□□□□ 0.48
TNFRSF1B-203ENST00000492361 ZNF790Q6PG37 636 aa18.02■□□□□ 0.48
TNFRSF1B-203ENST00000492361 FILIP1Q7Z7B0 1213 aa18.02■□□□□ 0.48
TNFRSF1B-203ENST00000492361 CHAF1AQ13111 956 aaPredicted RBP18.02■□□□□ 0.48
TNFRSF1B-203ENST00000492361 AMOTQ4VCS5 1084 aa18.02■□□□□ 0.48
TNFRSF1B-203ENST00000492361 Q6ZUG5 572 aa18.02■□□□□ 0.48
TNFRSF1B-203ENST00000492361 BECN2A8MW95 431 aa18.02■□□□□ 0.47
TNFRSF1B-203ENST00000492361 POLA2Q14181 598 aa18.01■□□□□ 0.47
TNFRSF1B-203ENST00000492361 PLEKHG1Q9ULL1 1385 aa18.01■□□□□ 0.47
TNFRSF1B-203ENST00000492361 TOM1L2Q6ZVM7 507 aa18.01■□□□□ 0.47
TNFRSF1B-203ENST00000492361 TTC6Q86TZ1 520 aa18.01■□□□□ 0.47
TNFRSF1B-203ENST00000492361 SALL3Q9BXA9 1300 aa18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 GOLGA6L19H0YKK7 550 aa18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 ME1P48163 572 aa18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 APOBRQ0VD83 1088 aa18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 MAP3K11Q16584 847 aa18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 UBE2Q2Q8WVN8 375 aa18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 DNAJC25Q9H1X3 360 aa18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 GPTP24298 496 aa18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 C16orf45Q96MC5 204 aaPredicted RBP18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 A1BGP04217 495 aa18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 POLR3DP05423 398 aaPredicted RBP18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 GNL2Q13823 731 aaKnown RBP18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 ANO6Q4KMQ2 910 aa18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 CLEC17AQ6ZS10 378 aa18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 ZMYND15Q9H091 742 aa18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 DDX21Q9NR30 783 aaKnown RBP eCLIP18■□□□□ 0.47
TNFRSF1B-203ENST00000492361 ADCY9O60503 1353 aa17.99■□□□□ 0.47
TNFRSF1B-203ENST00000492361 ATP2B1P20020 1258 aa17.99■□□□□ 0.47
TNFRSF1B-203ENST00000492361 PTGS1P23219 599 aa17.99■□□□□ 0.47
TNFRSF1B-203ENST00000492361 KNDC1Q76NI1 1749 aa17.99■□□□□ 0.47
TNFRSF1B-203ENST00000492361 DLG5Q8TDM6 1919 aa17.99■□□□□ 0.47
TNFRSF1B-203ENST00000492361 BIN1O00499 593 aa17.99■□□□□ 0.47
TNFRSF1B-203ENST00000492361 IGKV5-2P06315 115 aa17.99■□□□□ 0.47
TNFRSF1B-203ENST00000492361 NOLC1Q14978 699 aaKnown RBP eCLIP17.99■□□□□ 0.47
TNFRSF1B-203ENST00000492361 ZSCAN31Q96LW9 406 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1B-203ENST00000492361 NEK1Q96PY6 1258 aa17.99■□□□□ 0.47
TNFRSF1B-203ENST00000492361 USP31Q70CQ4 1352 aa17.99■□□□□ 0.47
TNFRSF1B-203ENST00000492361 RICTORQ6R327 1708 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms