RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 PDIA6Q15084 440 aa20.08■□□□□ 0.81
MRPL55-231ENST00000492170 LRP10Q7Z4F1 713 aa20.08■□□□□ 0.81
MRPL55-231ENST00000492170 CCDC146Q8IYE0 955 aa20.08■□□□□ 0.81
MRPL55-231ENST00000492170 RBM17Q96I25 401 aaKnown RBP20.08■□□□□ 0.81
MRPL55-231ENST00000492170 TAF1DQ9H5J8 278 aaPredicted RBP20.08■□□□□ 0.81
MRPL55-231ENST00000492170 SNED1Q8TER0 1413 aa20.08■□□□□ 0.8
MRPL55-231ENST00000492170 SCN4AP35499 1836 aa20.07■□□□□ 0.8
MRPL55-231ENST00000492170 POTEIP0CG38 1075 aa20.07■□□□□ 0.8
MRPL55-231ENST00000492170 POTEJP0CG39 1038 aa20.07■□□□□ 0.8
MRPL55-231ENST00000492170 NEUROD2Q15784 382 aa20.07■□□□□ 0.8
MRPL55-231ENST00000492170 PROSER3Q2NL68 480 aa20.07■□□□□ 0.8
MRPL55-231ENST00000492170 GRIPAP1Q4V328 841 aa20.07■□□□□ 0.8
MRPL55-231ENST00000492170 LDHDQ86WU2 507 aa20.07■□□□□ 0.8
MRPL55-231ENST00000492170 JDP2Q8WYK2 163 aa20.07■□□□□ 0.8
MRPL55-231ENST00000492170 PCNTO95613 3336 aa20.06■□□□□ 0.8
MRPL55-231ENST00000492170 FZD9O00144 591 aa20.06■□□□□ 0.8
MRPL55-231ENST00000492170 ANXA1P04083 346 aa20.06■□□□□ 0.8
MRPL55-231ENST00000492170 RUNDC1Q96C34 613 aa20.06■□□□□ 0.8
MRPL55-231ENST00000492170 CRAMP1Q96RY5 1269 aa20.06■□□□□ 0.8
MRPL55-231ENST00000492170 UTP14AQ9BVJ6 771 aaKnown RBP20.06■□□□□ 0.8
MRPL55-231ENST00000492170 PPEF1O14829 653 aaPredicted RBP20.05■□□□□ 0.8
MRPL55-231ENST00000492170 HSP90AB3PQ58FF7 597 aa20.05■□□□□ 0.8
MRPL55-231ENST00000492170 NECTIN2Q92692 538 aa20.05■□□□□ 0.8
MRPL55-231ENST00000492170 NLRP3Q96P20 1036 aa20.05■□□□□ 0.8
MRPL55-231ENST00000492170 CREBZFQ9NS37 354 aa20.05■□□□□ 0.8
MRPL55-231ENST00000492170 HACL1Q9UJ83 578 aa20.05■□□□□ 0.8
MRPL55-231ENST00000492170 RNF123Q5XPI4 1314 aa20.04■□□□□ 0.8
MRPL55-231ENST00000492170 EAPPQ56P03 285 aaPredicted RBP20.04■□□□□ 0.8
MRPL55-231ENST00000492170 CHL1O00533 1208 aa20.03■□□□□ 0.8
MRPL55-231ENST00000492170 AIMP1Q12904 312 aaKnown RBP20.03■□□□□ 0.8
MRPL55-231ENST00000492170 C3orf67Q6ZVT6 689 aa20.03■□□□□ 0.8
MRPL55-231ENST00000492170 COPS6Q7L5N1 327 aa20.03■□□□□ 0.8
MRPL55-231ENST00000492170 GPC2Q8N158 579 aa20.03■□□□□ 0.8
MRPL55-231ENST00000492170 XAGE3Q8WTP9 111 aa20.03■□□□□ 0.8
MRPL55-231ENST00000492170 TMX4Q9H1E5 349 aaPredicted RBP20.03■□□□□ 0.8
MRPL55-231ENST00000492170 LAS1LQ9Y4W2 734 aaKnown RBP20.03■□□□□ 0.8
MRPL55-231ENST00000492170 EPHX2P34913 555 aa20.02■□□□□ 0.8
MRPL55-231ENST00000492170 EIF6P56537 245 aaKnown RBP20.02■□□□□ 0.8
MRPL55-231ENST00000492170 DDX21Q9NR30 783 aaKnown RBP eCLIP20.02■□□□□ 0.8
MRPL55-231ENST00000492170 TRIM35Q9UPQ4 493 aa20.02■□□□□ 0.8
MRPL55-231ENST00000492170 TCERG1O14776 1098 aaKnown RBP20.01■□□□□ 0.79
MRPL55-231ENST00000492170 SLC10A5Q5PT55 438 aa20.01■□□□□ 0.79
MRPL55-231ENST00000492170 PNMA8AQ86V59 439 aaPredicted RBP20.01■□□□□ 0.79
MRPL55-231ENST00000492170 LARGE2Q8N3Y3 721 aa20.01■□□□□ 0.79
MRPL55-231ENST00000492170 ANKRD36CQ5JPF3 1778 aa20■□□□□ 0.79
MRPL55-231ENST00000492170 KRT24Q2M2I5 525 aa20■□□□□ 0.79
MRPL55-231ENST00000492170 NLRP10Q86W26 655 aa20■□□□□ 0.79
MRPL55-231ENST00000492170 ADAMTS8Q9UP79 889 aa20■□□□□ 0.79
MRPL55-231ENST00000492170 CLEC11AQ9Y240 323 aa20■□□□□ 0.79
MRPL55-231ENST00000492170 PASKQ96RG2 1323 aa20■□□□□ 0.79
MRPL55-231ENST00000492170 HOXB7P09629 217 aa19.99■□□□□ 0.79
MRPL55-231ENST00000492170 HSPA1AP0DMV8 641 aaKnown RBP19.99■□□□□ 0.79
MRPL55-231ENST00000492170 HSPA1BP0DMV9 641 aaKnown RBP19.99■□□□□ 0.79
MRPL55-231ENST00000492170 TCIRG1Q13488 830 aa19.99■□□□□ 0.79
MRPL55-231ENST00000492170 HDGFL1Q5TGJ6 251 aa19.99■□□□□ 0.79
MRPL55-231ENST00000492170 ATP6V0A2Q9Y487 856 aa19.99■□□□□ 0.79
MRPL55-231ENST00000492170 GJA3Q9Y6H8 435 aa19.99■□□□□ 0.79
MRPL55-231ENST00000492170 COL4A5P29400 1685 aa19.99■□□□□ 0.79
MRPL55-231ENST00000492170 ABCC4O15439 1325 aa19.99■□□□□ 0.79
MRPL55-231ENST00000492170 LMOD1P29536 600 aaPredicted RBP19.98■□□□□ 0.79
MRPL55-231ENST00000492170 NIM1KQ8IY84 436 aa19.98■□□□□ 0.79
MRPL55-231ENST00000492170 CHPF2Q9P2E5 772 aa19.98■□□□□ 0.79
MRPL55-231ENST00000492170 MKRN1Q9UHC7 482 aaKnown RBP19.98■□□□□ 0.79
MRPL55-231ENST00000492170 SH3TC1Q8TE82 1336 aa19.98■□□□□ 0.79
MRPL55-231ENST00000492170 PPIP5K2O43314 1243 aa19.97■□□□□ 0.79
MRPL55-231ENST00000492170 COL13A1Q5TAT6 717 aaPredicted RBP19.97■□□□□ 0.79
MRPL55-231ENST00000492170 SLC51AQ86UW1 340 aa19.97■□□□□ 0.79
MRPL55-231ENST00000492170 TRMT112Q9UI30 125 aaKnown RBP19.97■□□□□ 0.79
MRPL55-231ENST00000492170 ADAMTSL1Q8N6G6 1762 aa19.97■□□□□ 0.79
MRPL55-231ENST00000492170 HCLS1P14317 486 aaPredicted RBP19.96■□□□□ 0.79
MRPL55-231ENST00000492170 SUPT20HQ8NEM7 779 aa19.96■□□□□ 0.79
MRPL55-231ENST00000492170 CFAP44Q96MT7 982 aa19.96■□□□□ 0.79
MRPL55-231ENST00000492170 VPS33BQ9H267 617 aa19.96■□□□□ 0.79
MRPL55-231ENST00000492170 PRKRIP1Q9H875 184 aaPredicted RBP19.96■□□□□ 0.79
MRPL55-231ENST00000492170 CNTNAP1P78357 1384 aa19.95■□□□□ 0.79
MRPL55-231ENST00000492170 TMEM88BA6NKF7 163 aa19.95■□□□□ 0.78
MRPL55-231ENST00000492170 BBOX1O75936 387 aa19.95■□□□□ 0.78
MRPL55-231ENST00000492170 ITGBL1O95965 494 aaPredicted RBP19.95■□□□□ 0.78
MRPL55-231ENST00000492170 DDX46Q7L014 1031 aaKnown RBP19.95■□□□□ 0.78
MRPL55-231ENST00000492170 PLBD2Q8NHP8 589 aa19.95■□□□□ 0.78
MRPL55-231ENST00000492170 DBF4Q9UBU7 674 aaPredicted RBP19.95■□□□□ 0.78
MRPL55-231ENST00000492170 AOC3Q16853 763 aa19.94■□□□□ 0.78
MRPL55-231ENST00000492170 CNTROBQ8N137 903 aa19.94■□□□□ 0.78
MRPL55-231ENST00000492170 SCNN1DP51172 638 aa19.93■□□□□ 0.78
MRPL55-231ENST00000492170 GRAPQ13588 217 aa19.93■□□□□ 0.78
MRPL55-231ENST00000492170 DUSP27Q5VZP5 1158 aa19.93■□□□□ 0.78
MRPL55-231ENST00000492170 MAP1SQ66K74 1059 aaPredicted RBP19.93■□□□□ 0.78
MRPL55-231ENST00000492170 DPP8Q6V1X1 898 aaPredicted RBP19.93■□□□□ 0.78
MRPL55-231ENST00000492170 ANKRD13DQ6ZTN6 518 aa19.93■□□□□ 0.78
MRPL55-231ENST00000492170 SP8Q8IXZ3 490 aa19.93■□□□□ 0.78
MRPL55-231ENST00000492170 GRAPLQ8TC17 118 aaPredicted RBP19.93■□□□□ 0.78
MRPL55-231ENST00000492170 RTFDC1Q9BY42 306 aaPredicted RBP19.93■□□□□ 0.78
MRPL55-231ENST00000492170 LAMB2P55268 1798 aa19.93■□□□□ 0.78
MRPL55-231ENST00000492170 MPNDQ8N594 471 aa19.92■□□□□ 0.78
MRPL55-231ENST00000492170 MBIPQ9NS73 344 aa19.92■□□□□ 0.78
MRPL55-231ENST00000492170 HYPKQ9NX55 129 aa19.92■□□□□ 0.78
MRPL55-231ENST00000492170 CALD1Q05682 793 aaKnown RBP19.91■□□□□ 0.78
MRPL55-231ENST00000492170 TNS4Q8IZW8 715 aa19.91■□□□□ 0.78
MRPL55-231ENST00000492170 LTBP1Q14766 1721 aa19.9■□□□□ 0.78
MRPL55-231ENST00000492170 EPS15P42566 896 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms