RNA–Protein interactions for RNA: ENST00000491439.1

SNAP47-211, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 734 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-211ENST00000491439 IARSP41252 1262 aaKnown RBP13.2□□□□□ -0.3
SNAP47-211ENST00000491439 CC2D2BQ6DHV5 1058 aa13.2□□□□□ -0.3
SNAP47-211ENST00000491439 CHADLQ6NUI6 762 aa13.2□□□□□ -0.3
SNAP47-211ENST00000491439 SLC51AQ86UW1 340 aa13.2□□□□□ -0.3
SNAP47-211ENST00000491439 SYNE4Q8N205 404 aa13.2□□□□□ -0.3
SNAP47-211ENST00000491439 CRAMP1Q96RY5 1269 aa13.2□□□□□ -0.3
SNAP47-211ENST00000491439 RNF123Q5XPI4 1314 aa13.19□□□□□ -0.3
SNAP47-211ENST00000491439 CACNA1SQ13698 1873 aa13.19□□□□□ -0.3
SNAP47-211ENST00000491439 CCDC88AQ3V6T2 1871 aa13.19□□□□□ -0.3
SNAP47-211ENST00000491439 NUP98P52948 1817 aa13.19□□□□□ -0.3
SNAP47-211ENST00000491439 IQCA1LA6NCM1 817 aa13.19□□□□□ -0.3
SNAP47-211ENST00000491439 FZD9O00144 591 aa13.19□□□□□ -0.3
SNAP47-211ENST00000491439 WDR43Q15061 677 aaKnown RBP eCLIP13.19□□□□□ -0.3
SNAP47-211ENST00000491439 KRT24Q2M2I5 525 aa13.19□□□□□ -0.3
SNAP47-211ENST00000491439 SLC10A5Q5PT55 438 aa13.19□□□□□ -0.3
SNAP47-211ENST00000491439 PPP1R42Q7Z4L9 355 aa13.19□□□□□ -0.3
SNAP47-211ENST00000491439 RPGRQ92834 1020 aaKnown RBP13.19□□□□□ -0.3
SNAP47-211ENST00000491439 TAF1DQ9H5J8 278 aaPredicted RBP13.19□□□□□ -0.3
SNAP47-211ENST00000491439 ADAMTS8Q9UP79 889 aa13.19□□□□□ -0.3
SNAP47-211ENST00000491439 COL4A5P29400 1685 aa13.18□□□□□ -0.3
SNAP47-211ENST00000491439 NEUROD2Q15784 382 aa13.18□□□□□ -0.3
SNAP47-211ENST00000491439 COPS6Q7L5N1 327 aa13.18□□□□□ -0.3
SNAP47-211ENST00000491439 XAGE3Q8WTP9 111 aa13.18□□□□□ -0.3
SNAP47-211ENST00000491439 PRKRIP1Q9H875 184 aaPredicted RBP13.18□□□□□ -0.3
SNAP47-211ENST00000491439 DDX21Q9NR30 783 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNAP47-211ENST00000491439 PPEF1O14829 653 aaPredicted RBP13.17□□□□□ -0.3
SNAP47-211ENST00000491439 HOXB7P09629 217 aa13.17□□□□□ -0.3
SNAP47-211ENST00000491439 GRIPAP1Q4V328 841 aa13.17□□□□□ -0.3
SNAP47-211ENST00000491439 NLRP10Q86W26 655 aa13.17□□□□□ -0.3
SNAP47-211ENST00000491439 LDHDQ86WU2 507 aa13.17□□□□□ -0.3
SNAP47-211ENST00000491439 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
SNAP47-211ENST00000491439 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
SNAP47-211ENST00000491439 UTP14AQ9BVJ6 771 aaKnown RBP13.17□□□□□ -0.3
SNAP47-211ENST00000491439 PASKQ96RG2 1323 aa13.16□□□□□ -0.3
SNAP47-211ENST00000491439 HSP90AB3PQ58FF7 597 aa13.16□□□□□ -0.3
SNAP47-211ENST00000491439 GPC2Q8N158 579 aa13.16□□□□□ -0.3
SNAP47-211ENST00000491439 NLRP3Q96P20 1036 aa13.16□□□□□ -0.3
SNAP47-211ENST00000491439 CHPF2Q9P2E5 772 aa13.16□□□□□ -0.3
SNAP47-211ENST00000491439 PCNTO95613 3336 aa13.16□□□□□ -0.3
SNAP47-211ENST00000491439 ABCC4O15439 1325 aa13.15□□□□□ -0.3
SNAP47-211ENST00000491439 AIMP1Q12904 312 aaKnown RBP13.15□□□□□ -0.3
SNAP47-211ENST00000491439 TCIRG1Q13488 830 aa13.15□□□□□ -0.3
SNAP47-211ENST00000491439 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
SNAP47-211ENST00000491439 CREBZFQ9NS37 354 aa13.15□□□□□ -0.3
SNAP47-211ENST00000491439 HACL1Q9UJ83 578 aa13.15□□□□□ -0.3
SNAP47-211ENST00000491439 ADAMTSL1Q8N6G6 1762 aa13.15□□□□□ -0.31
SNAP47-211ENST00000491439 ZNF853P0CG23 659 aa13.14□□□□□ -0.31
SNAP47-211ENST00000491439 EPHX2P34913 555 aa13.14□□□□□ -0.31
SNAP47-211ENST00000491439 HDGFL1Q5TGJ6 251 aa13.14□□□□□ -0.31
SNAP47-211ENST00000491439 JDP2Q8WYK2 163 aa13.14□□□□□ -0.31
SNAP47-211ENST00000491439 ATP6V0A2Q9Y487 856 aa13.14□□□□□ -0.31
SNAP47-211ENST00000491439 LAS1LQ9Y4W2 734 aaKnown RBP13.14□□□□□ -0.31
SNAP47-211ENST00000491439 SCN4AP35499 1836 aa13.13□□□□□ -0.31
SNAP47-211ENST00000491439 ITGBL1O95965 494 aaPredicted RBP13.13□□□□□ -0.31
SNAP47-211ENST00000491439 HCLS1P14317 486 aaPredicted RBP13.13□□□□□ -0.31
SNAP47-211ENST00000491439 RTFDC1Q9BY42 306 aaPredicted RBP13.13□□□□□ -0.31
SNAP47-211ENST00000491439 MBIPQ9NS73 344 aa13.13□□□□□ -0.31
SNAP47-211ENST00000491439 DBF4Q9UBU7 674 aaPredicted RBP13.13□□□□□ -0.31
SNAP47-211ENST00000491439 SH3TC1Q8TE82 1336 aa13.13□□□□□ -0.31
SNAP47-211ENST00000491439 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
SNAP47-211ENST00000491439 EIF6P56537 245 aaKnown RBP13.12□□□□□ -0.31
SNAP47-211ENST00000491439 PNMA8AQ86V59 439 aaPredicted RBP13.12□□□□□ -0.31
SNAP47-211ENST00000491439 LARGE2Q8N3Y3 721 aa13.12□□□□□ -0.31
SNAP47-211ENST00000491439 PLBD2Q8NHP8 589 aa13.12□□□□□ -0.31
SNAP47-211ENST00000491439 ISCA1Q9BUE6 129 aa13.12□□□□□ -0.31
SNAP47-211ENST00000491439 VPS33BQ9H267 617 aa13.12□□□□□ -0.31
SNAP47-211ENST00000491439 TRMT112Q9UI30 125 aaKnown RBP13.12□□□□□ -0.31
SNAP47-211ENST00000491439 ANKRD36CQ5JPF3 1778 aa13.12□□□□□ -0.31
SNAP47-211ENST00000491439 BBOX1O75936 387 aa13.11□□□□□ -0.31
SNAP47-211ENST00000491439 SCNN1DP51172 638 aa13.11□□□□□ -0.31
SNAP47-211ENST00000491439 EAPPQ56P03 285 aaPredicted RBP13.11□□□□□ -0.31
SNAP47-211ENST00000491439 DUSP27Q5VZP5 1158 aa13.11□□□□□ -0.31
SNAP47-211ENST00000491439 ANKRD13DQ6ZTN6 518 aa13.11□□□□□ -0.31
SNAP47-211ENST00000491439 IFT57Q9NWB7 429 aa13.11□□□□□ -0.31
SNAP47-211ENST00000491439 LTBP1Q14766 1721 aa13.1□□□□□ -0.31
SNAP47-211ENST00000491439 CNTNAP1P78357 1384 aa13.1□□□□□ -0.31
SNAP47-211ENST00000491439 APAF1O14727 1248 aa13.1□□□□□ -0.31
SNAP47-211ENST00000491439 PPIP5K2O43314 1243 aa13.1□□□□□ -0.31
SNAP47-211ENST00000491439 HSPA1AP0DMV8 641 aaKnown RBP13.1□□□□□ -0.31
SNAP47-211ENST00000491439 HSPA1BP0DMV9 641 aaKnown RBP13.1□□□□□ -0.31
SNAP47-211ENST00000491439 GRAPQ13588 217 aa13.1□□□□□ -0.31
SNAP47-211ENST00000491439 AOC3Q16853 763 aa13.1□□□□□ -0.31
SNAP47-211ENST00000491439 COL13A1Q5TAT6 717 aaPredicted RBP13.1□□□□□ -0.31
SNAP47-211ENST00000491439 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
SNAP47-211ENST00000491439 NIM1KQ8IY84 436 aa13.1□□□□□ -0.31
SNAP47-211ENST00000491439 GRAPLQ8TC17 118 aaPredicted RBP13.1□□□□□ -0.31
SNAP47-211ENST00000491439 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
SNAP47-211ENST00000491439 GJA3Q9Y6H8 435 aa13.1□□□□□ -0.31
SNAP47-211ENST00000491439 TRIM28Q13263 835 aaKnown RBP13.09□□□□□ -0.31
SNAP47-211ENST00000491439 DDX46Q7L014 1031 aaKnown RBP13.09□□□□□ -0.31
SNAP47-211ENST00000491439 SUPT20HQ8NEM7 779 aa13.09□□□□□ -0.31
SNAP47-211ENST00000491439 MKRN1Q9UHC7 482 aaKnown RBP13.09□□□□□ -0.31
SNAP47-211ENST00000491439 DUOX1Q9NRD9 1551 aa13.08□□□□□ -0.32
SNAP47-211ENST00000491439 TMEM88BA6NKF7 163 aa13.08□□□□□ -0.32
SNAP47-211ENST00000491439 ATP5J2-PTCD1G3V325 749 aa13.08□□□□□ -0.32
SNAP47-211ENST00000491439 EPS15P42566 896 aa13.08□□□□□ -0.32
SNAP47-211ENST00000491439 GNAI1P63096 354 aa13.08□□□□□ -0.32
SNAP47-211ENST00000491439 CALD1Q05682 793 aaKnown RBP13.08□□□□□ -0.32
SNAP47-211ENST00000491439 KIAA2012Q0VF49 1180 aa13.08□□□□□ -0.32
SNAP47-211ENST00000491439 SF3B3Q15393 1217 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms