RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 FBXO31Q5XUX0 539 aaPredicted RBP10.92□□□□□ -0.66
SMC6-209ENST00000489535 PPP2R2DQ66LE6 453 aa10.92□□□□□ -0.66
SMC6-209ENST00000489535 OXCT2Q9BYC2 517 aaPredicted RBP10.92□□□□□ -0.66
SMC6-209ENST00000489535 MKL2Q9ULH7 1088 aa10.92□□□□□ -0.66
SMC6-209ENST00000489535 MYOM2P54296 1465 aa10.92□□□□□ -0.66
SMC6-209ENST00000489535 NEXMIFQ5QGS0 1516 aa10.91□□□□□ -0.66
SMC6-209ENST00000489535 DZIP3Q86Y13 1208 aaKnown RBP10.91□□□□□ -0.66
SMC6-209ENST00000489535 ADAMTSL3P82987 1691 aa10.9□□□□□ -0.66
SMC6-209ENST00000489535 ATP5J2-PTCD1G3V325 749 aa10.9□□□□□ -0.66
SMC6-209ENST00000489535 POU4F2Q12837 409 aa10.9□□□□□ -0.66
SMC6-209ENST00000489535 DIEXFQ68CQ4 756 aaKnown RBP10.9□□□□□ -0.66
SMC6-209ENST00000489535 C1orf229Q6ZS94 237 aaPredicted RBP10.9□□□□□ -0.66
SMC6-209ENST00000489535 HIRIP3Q9BW71 556 aaPredicted RBP10.9□□□□□ -0.66
SMC6-209ENST00000489535 ESF1Q9H501 851 aaKnown RBP10.9□□□□□ -0.66
SMC6-209ENST00000489535 MEN1O00255 615 aa10.89□□□□□ -0.67
SMC6-209ENST00000489535 HSPA5P11021 654 aaKnown RBP10.89□□□□□ -0.67
SMC6-209ENST00000489535 MAP2K3P46734 347 aa10.89□□□□□ -0.67
SMC6-209ENST00000489535 EIF4G2P78344 907 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMC6-209ENST00000489535 EPS8L1Q8TE68 723 aa10.89□□□□□ -0.67
SMC6-209ENST00000489535 RSPH6AQ9H0K4 717 aa10.89□□□□□ -0.67
SMC6-209ENST00000489535 SEPT12Q8IYM1 358 aa10.88□□□□□ -0.67
SMC6-209ENST00000489535 MYO3AQ8NEV4 1616 aa10.87□□□□□ -0.67
SMC6-209ENST00000489535 A0A1W2PRU2 124 aa10.87□□□□□ -0.67
SMC6-209ENST00000489535 NUCKS1Q9H1E3 243 aaKnown RBP10.87□□□□□ -0.67
SMC6-209ENST00000489535 ROCK2O75116 1388 aaKnown RBP10.87□□□□□ -0.67
SMC6-209ENST00000489535 ZMYM3Q14202 1370 aa10.87□□□□□ -0.67
SMC6-209ENST00000489535 NRXN1Q9ULB1 1477 aa10.87□□□□□ -0.67
SMC6-209ENST00000489535 SETBP1Q9Y6X0 1596 aa10.86□□□□□ -0.67
SMC6-209ENST00000489535 THBS1P07996 1170 aa10.86□□□□□ -0.67
SMC6-209ENST00000489535 NBPF10Q6P3W6 841 aaKnown RBP10.86□□□□□ -0.67
SMC6-209ENST00000489535 NBPF15Q8N660 670 aa10.86□□□□□ -0.67
SMC6-209ENST00000489535 USP47Q96K76 1375 aa10.86□□□□□ -0.67
SMC6-209ENST00000489535 SETD1AO15047 1707 aaKnown RBP10.86□□□□□ -0.67
SMC6-209ENST00000489535 ARHGEF28Q8N1W1 1705 aaKnown RBP10.86□□□□□ -0.67
SMC6-209ENST00000489535 HOXB4P17483 251 aaPredicted RBP10.85□□□□□ -0.67
SMC6-209ENST00000489535 ITGB7P26010 798 aa10.85□□□□□ -0.67
SMC6-209ENST00000489535 IDI1Q13907 227 aa10.85□□□□□ -0.67
SMC6-209ENST00000489535 KRTAP4-12Q9BQ66 201 aa10.85□□□□□ -0.67
SMC6-209ENST00000489535 CARD11Q9BXL7 1154 aa10.85□□□□□ -0.67
SMC6-209ENST00000489535 GRIP2Q9C0E4 1043 aa10.85□□□□□ -0.67
SMC6-209ENST00000489535 SLC52A1Q9NWF4 448 aa10.85□□□□□ -0.67
SMC6-209ENST00000489535 QRICH2Q9H0J4 1663 aa10.85□□□□□ -0.67
SMC6-209ENST00000489535 SETD1BQ9UPS6 1966 aaKnown RBP10.85□□□□□ -0.67
SMC6-209ENST00000489535 KLRG1Q96E93 195 aa10.84□□□□□ -0.67
SMC6-209ENST00000489535 SUV39H2Q9H5I1 410 aa10.84□□□□□ -0.67
SMC6-209ENST00000489535 GPRASP1Q5JY77 1395 aa10.84□□□□□ -0.67
SMC6-209ENST00000489535 ZNF142P52746 1687 aaPredicted RBP10.83□□□□□ -0.68
SMC6-209ENST00000489535 SPATA31C2B4DYI2 1134 aa10.83□□□□□ -0.68
SMC6-209ENST00000489535 WDR44Q5JSH3 913 aa10.83□□□□□ -0.68
SMC6-209ENST00000489535 SLC27A3Q5K4L6 730 aa10.83□□□□□ -0.68
SMC6-209ENST00000489535 LINC00114Q6XXX2 140 aa10.83□□□□□ -0.68
SMC6-209ENST00000489535 CFHR5Q9BXR6 569 aa10.83□□□□□ -0.68
SMC6-209ENST00000489535 RPGRIP1LQ68CZ1 1315 aa10.83□□□□□ -0.68
SMC6-209ENST00000489535 A2ML1A8K2U0 1454 aa10.82□□□□□ -0.68
SMC6-209ENST00000489535 TNRQ92752 1358 aa10.82□□□□□ -0.68
SMC6-209ENST00000489535 GRIN2CQ14957 1233 aa10.82□□□□□ -0.68
SMC6-209ENST00000489535 NBPF1Q3BBV0 1214 aa10.82□□□□□ -0.68
SMC6-209ENST00000489535 RRAGCQ9HB90 399 aa10.82□□□□□ -0.68
SMC6-209ENST00000489535 PIK3C2GO75747 1445 aa10.82□□□□□ -0.68
SMC6-209ENST00000489535 ADGRF5Q8IZF2 1346 aa10.82□□□□□ -0.68
SMC6-209ENST00000489535 F11P03951 625 aa10.81□□□□□ -0.68
SMC6-209ENST00000489535 EDARADDQ8WWZ3 215 aa10.81□□□□□ -0.68
SMC6-209ENST00000489535 HMX1Q9NP08 348 aaPredicted RBP10.81□□□□□ -0.68
SMC6-209ENST00000489535 NRXN3Q9Y4C0 1643 aa10.8□□□□□ -0.68
SMC6-209ENST00000489535 C1QTNF9BB2RNN3 333 aa10.8□□□□□ -0.68
SMC6-209ENST00000489535 NLRP3Q96P20 1036 aa10.8□□□□□ -0.68
SMC6-209ENST00000489535 KRTAP9-9Q9BYP9 154 aa10.8□□□□□ -0.68
SMC6-209ENST00000489535 KRTAP9-4Q9BYQ2 154 aa10.8□□□□□ -0.68
SMC6-209ENST00000489535 TIMMDC1Q9NPL8 285 aa10.8□□□□□ -0.68
SMC6-209ENST00000489535 GDF2Q9UK05 429 aaPredicted RBP10.8□□□□□ -0.68
SMC6-209ENST00000489535 KNDC1Q76NI1 1749 aa10.79□□□□□ -0.68
SMC6-209ENST00000489535 ADGRB1O14514 1584 aa10.79□□□□□ -0.68
SMC6-209ENST00000489535 ZFYVE9O95405 1425 aa10.79□□□□□ -0.68
SMC6-209ENST00000489535 ERVK-9P63128 1117 aa10.79□□□□□ -0.68
SMC6-209ENST00000489535 CLN3Q13286 438 aa10.79□□□□□ -0.68
SMC6-209ENST00000489535 CD163Q86VB7 1156 aa10.79□□□□□ -0.68
SMC6-209ENST00000489535 PNMA1Q8ND90 353 aa10.79□□□□□ -0.68
SMC6-209ENST00000489535 SCAF11Q99590 1463 aaKnown RBP10.79□□□□□ -0.68
SMC6-209ENST00000489535 NLRP1Q9C000 1473 aa10.79□□□□□ -0.68
SMC6-209ENST00000489535 CCDC7Q96M83 1385 aa10.78□□□□□ -0.68
SMC6-209ENST00000489535 ALKQ9UM73 1620 aa10.78□□□□□ -0.68
SMC6-209ENST00000489535 GIGYF1O75420 1035 aaPredicted RBP10.78□□□□□ -0.68
SMC6-209ENST00000489535 AP1G2O75843 785 aa10.78□□□□□ -0.68
SMC6-209ENST00000489535 CEBPAP49715 358 aaPredicted RBP10.78□□□□□ -0.68
SMC6-209ENST00000489535 DDX10Q13206 875 aaKnown RBP10.78□□□□□ -0.68
SMC6-209ENST00000489535 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMC6-209ENST00000489535 MYOM1P52179 1685 aa10.78□□□□□ -0.68
SMC6-209ENST00000489535 WASHC2AQ641Q2 1341 aa10.78□□□□□ -0.68
SMC6-209ENST00000489535 ASXL1Q8IXJ9 1541 aa10.78□□□□□ -0.68
SMC6-209ENST00000489535 CEP170BQ9Y4F5 1589 aaPredicted RBP10.77□□□□□ -0.68
SMC6-209ENST00000489535 RIMS2Q9UQ26 1411 aa10.77□□□□□ -0.68
SMC6-209ENST00000489535 WASLO00401 505 aaPredicted RBP10.77□□□□□ -0.69
SMC6-209ENST00000489535 CFAP70Q5T0N1 1121 aa10.77□□□□□ -0.69
SMC6-209ENST00000489535 CC2D2BQ6DHV5 1058 aa10.77□□□□□ -0.69
SMC6-209ENST00000489535 TAS1R3Q7RTX0 852 aa10.77□□□□□ -0.69
SMC6-209ENST00000489535 ST20-MTHFSA0A0A6YYL1 179 aa10.76□□□□□ -0.69
SMC6-209ENST00000489535 CHRNA4P43681 627 aa10.76□□□□□ -0.69
SMC6-209ENST00000489535 UBAP2LQ14157 1087 aaKnown RBP10.76□□□□□ -0.69
SMC6-209ENST00000489535 SKIV2LQ15477 1246 aaKnown RBP10.76□□□□□ -0.69
SMC6-209ENST00000489535 GOLGA6L1Q8N7Z2 621 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms