RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 TAF1DQ9H5J8 278 aaPredicted RBP20.91■□□□□ 0.94
ERGIC3-217ENST00000488935 MKRN1Q9UHC7 482 aaKnown RBP20.91■□□□□ 0.94
ERGIC3-217ENST00000488935 COL4A5P29400 1685 aa20.9■□□□□ 0.94
ERGIC3-217ENST00000488935 RGL2O15211 777 aa20.9■□□□□ 0.94
ERGIC3-217ENST00000488935 NTSR2O95665 410 aa20.9■□□□□ 0.94
ERGIC3-217ENST00000488935 RALBP1Q15311 655 aa20.9■□□□□ 0.94
ERGIC3-217ENST00000488935 GIGYF2Q6Y7W6 1299 aaKnown RBP20.9■□□□□ 0.94
ERGIC3-217ENST00000488935 RNF123Q5XPI4 1314 aa20.89■□□□□ 0.93
ERGIC3-217ENST00000488935 CLEC11AQ9Y240 323 aa20.89■□□□□ 0.93
ERGIC3-217ENST00000488935 GJA3Q9Y6H8 435 aa20.88■□□□□ 0.93
ERGIC3-217ENST00000488935 SNED1Q8TER0 1413 aa20.87■□□□□ 0.93
ERGIC3-217ENST00000488935 HSPA1AP0DMV8 641 aaKnown RBP20.87■□□□□ 0.93
ERGIC3-217ENST00000488935 HSPA1BP0DMV9 641 aaKnown RBP20.87■□□□□ 0.93
ERGIC3-217ENST00000488935 COPS6Q7L5N1 327 aa20.87■□□□□ 0.93
ERGIC3-217ENST00000488935 XAGE3Q8WTP9 111 aa20.87■□□□□ 0.93
ERGIC3-217ENST00000488935 L3MBTL3Q96JM7 780 aaPredicted RBP20.87■□□□□ 0.93
ERGIC3-217ENST00000488935 SCN4AP35499 1836 aa20.87■□□□□ 0.93
ERGIC3-217ENST00000488935 FZD9O00144 591 aa20.86■□□□□ 0.93
ERGIC3-217ENST00000488935 CAPN15O75808 1086 aa20.86■□□□□ 0.93
ERGIC3-217ENST00000488935 RBM17Q96I25 401 aaKnown RBP20.86■□□□□ 0.93
ERGIC3-217ENST00000488935 HACL1Q9UJ83 578 aa20.86■□□□□ 0.93
ERGIC3-217ENST00000488935 TAF1P21675 1872 aa20.86■□□□□ 0.93
ERGIC3-217ENST00000488935 IQCA1LA6NCM1 817 aa20.85■□□□□ 0.93
ERGIC3-217ENST00000488935 PPEF1O14829 653 aaPredicted RBP20.85■□□□□ 0.93
ERGIC3-217ENST00000488935 HCLS1P14317 486 aaPredicted RBP20.85■□□□□ 0.93
ERGIC3-217ENST00000488935 HOXA10P31260 410 aaPredicted RBP20.85■□□□□ 0.93
ERGIC3-217ENST00000488935 EPHX2P34913 555 aa20.85■□□□□ 0.93
ERGIC3-217ENST00000488935 TRIM35Q9UPQ4 493 aa20.85■□□□□ 0.93
ERGIC3-217ENST00000488935 MYBBP1AQ9BQG0 1328 aaKnown RBP20.84■□□□□ 0.93
ERGIC3-217ENST00000488935 MAP1SQ66K74 1059 aaPredicted RBP20.84■□□□□ 0.93
ERGIC3-217ENST00000488935 PPP1R42Q7Z4L9 355 aa20.84■□□□□ 0.93
ERGIC3-217ENST00000488935 LDHDQ86WU2 507 aa20.84■□□□□ 0.93
ERGIC3-217ENST00000488935 UTP14AQ9BVJ6 771 aaKnown RBP20.84■□□□□ 0.93
ERGIC3-217ENST00000488935 ERBB4Q15303 1308 aa20.83■□□□□ 0.93
ERGIC3-217ENST00000488935 FMR1Q06787 632 aaKnown RBP eCLIP20.83■□□□□ 0.93
ERGIC3-217ENST00000488935 LARGE2Q8N3Y3 721 aa20.83■□□□□ 0.93
ERGIC3-217ENST00000488935 JDP2Q8WYK2 163 aa20.83■□□□□ 0.93
ERGIC3-217ENST00000488935 PSMD1Q99460 953 aa20.83■□□□□ 0.93
ERGIC3-217ENST00000488935 CREBZFQ9NS37 354 aa20.83■□□□□ 0.93
ERGIC3-217ENST00000488935 ADAMTS8Q9UP79 889 aa20.83■□□□□ 0.93
ERGIC3-217ENST00000488935 LAMB2P55268 1798 aa20.82■□□□□ 0.92
ERGIC3-217ENST00000488935 ITGBL1O95965 494 aaPredicted RBP20.82■□□□□ 0.92
ERGIC3-217ENST00000488935 NLRP3Q96P20 1036 aa20.82■□□□□ 0.92
ERGIC3-217ENST00000488935 CRAMP1Q96RY5 1269 aa20.82■□□□□ 0.92
ERGIC3-217ENST00000488935 LTBP1Q14766 1721 aa20.81■□□□□ 0.92
ERGIC3-217ENST00000488935 PASKQ96RG2 1323 aa20.81■□□□□ 0.92
ERGIC3-217ENST00000488935 PARP10Q53GL7 1025 aa20.81■□□□□ 0.92
ERGIC3-217ENST00000488935 NLRP10Q86W26 655 aa20.81■□□□□ 0.92
ERGIC3-217ENST00000488935 CHPF2Q9P2E5 772 aa20.81■□□□□ 0.92
ERGIC3-217ENST00000488935 IBTKQ9P2D0 1353 aaPredicted RBP20.81■□□□□ 0.92
ERGIC3-217ENST00000488935 ABCC4O15439 1325 aa20.8■□□□□ 0.92
ERGIC3-217ENST00000488935 CHL1O00533 1208 aa20.8■□□□□ 0.92
ERGIC3-217ENST00000488935 EPS15P42566 896 aa20.8■□□□□ 0.92
ERGIC3-217ENST00000488935 EIF6P56537 245 aaKnown RBP20.8■□□□□ 0.92
ERGIC3-217ENST00000488935 LMOD3Q0VAK6 560 aa20.8■□□□□ 0.92
ERGIC3-217ENST00000488935 WDR43Q15061 677 aaKnown RBP eCLIP20.8■□□□□ 0.92
ERGIC3-217ENST00000488935 AOC3Q16853 763 aa20.8■□□□□ 0.92
ERGIC3-217ENST00000488935 RUNDC1Q96C34 613 aa20.8■□□□□ 0.92
ERGIC3-217ENST00000488935 ANKRD36CQ5JPF3 1778 aa20.8■□□□□ 0.92
ERGIC3-217ENST00000488935 RIC1Q4ADV7 1423 aa20.79■□□□□ 0.92
ERGIC3-217ENST00000488935 GPC2Q8N158 579 aa20.79■□□□□ 0.92
ERGIC3-217ENST00000488935 ADAMTSL1Q8N6G6 1762 aa20.78■□□□□ 0.92
ERGIC3-217ENST00000488935 PPIP5K2O43314 1243 aa20.78■□□□□ 0.92
ERGIC3-217ENST00000488935 TCIRG1Q13488 830 aa20.78■□□□□ 0.92
ERGIC3-217ENST00000488935 RTL5Q5HYW3 569 aaPredicted RBP20.78■□□□□ 0.92
ERGIC3-217ENST00000488935 SLC10A5Q5PT55 438 aa20.78■□□□□ 0.92
ERGIC3-217ENST00000488935 CC2D2BQ6DHV5 1058 aa20.78■□□□□ 0.92
ERGIC3-217ENST00000488935 TNS4Q8IZW8 715 aa20.78■□□□□ 0.92
ERGIC3-217ENST00000488935 CNTROBQ8N137 903 aa20.78■□□□□ 0.92
ERGIC3-217ENST00000488935 DDX21Q9NR30 783 aaKnown RBP eCLIP20.78■□□□□ 0.92
ERGIC3-217ENST00000488935 BABAM1Q9NWV8 329 aa20.78■□□□□ 0.92
ERGIC3-217ENST00000488935 TRMT112Q9UI30 125 aaKnown RBP20.78■□□□□ 0.92
ERGIC3-217ENST00000488935 ATP5J2-PTCD1G3V325 749 aa20.77■□□□□ 0.92
ERGIC3-217ENST00000488935 ATP6V0A2Q9Y487 856 aa20.77■□□□□ 0.92
ERGIC3-217ENST00000488935 TMEM88BA6NKF7 163 aa20.76■□□□□ 0.91
ERGIC3-217ENST00000488935 VEGFBP49765 207 aa20.76■□□□□ 0.91
ERGIC3-217ENST00000488935 SCNN1DP51172 638 aa20.76■□□□□ 0.91
ERGIC3-217ENST00000488935 HDGFL1Q5TGJ6 251 aa20.76■□□□□ 0.91
ERGIC3-217ENST00000488935 NIM1KQ8IY84 436 aa20.76■□□□□ 0.91
ERGIC3-217ENST00000488935 CNTNAP1P78357 1384 aa20.75■□□□□ 0.91
ERGIC3-217ENST00000488935 ELL2O00472 640 aaPredicted RBP20.75■□□□□ 0.91
ERGIC3-217ENST00000488935 FAM89AQ96GI7 184 aa20.74■□□□□ 0.91
ERGIC3-217ENST00000488935 FOXN1O15353 648 aa20.73■□□□□ 0.91
ERGIC3-217ENST00000488935 LMOD1P29536 600 aaPredicted RBP20.73■□□□□ 0.91
ERGIC3-217ENST00000488935 HSP90AB3PQ58FF7 597 aa20.73■□□□□ 0.91
ERGIC3-217ENST00000488935 DUSP27Q5VZP5 1158 aa20.73■□□□□ 0.91
ERGIC3-217ENST00000488935 PNMA8AQ86V59 439 aaPredicted RBP20.73■□□□□ 0.91
ERGIC3-217ENST00000488935 MBIPQ9NS73 344 aa20.73■□□□□ 0.91
ERGIC3-217ENST00000488935 COL4A1P02462 1669 aa20.73■□□□□ 0.91
ERGIC3-217ENST00000488935 TRAF5O00463 557 aa20.72■□□□□ 0.91
ERGIC3-217ENST00000488935 APAF1O14727 1248 aa20.72■□□□□ 0.91
ERGIC3-217ENST00000488935 CXCL9Q07325 125 aa20.72■□□□□ 0.91
ERGIC3-217ENST00000488935 DPP8Q6V1X1 898 aaPredicted RBP20.72■□□□□ 0.91
ERGIC3-217ENST00000488935 DDX46Q7L014 1031 aaKnown RBP20.72■□□□□ 0.91
ERGIC3-217ENST00000488935 TMX4Q9H1E5 349 aaPredicted RBP20.72■□□□□ 0.91
ERGIC3-217ENST00000488935 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
ERGIC3-217ENST00000488935 SH3TC1Q8TE82 1336 aa20.72■□□□□ 0.91
ERGIC3-217ENST00000488935 DDX60Q8IY21 1712 aaKnown RBP20.71■□□□□ 0.91
ERGIC3-217ENST00000488935 RAD17O75943 681 aa20.71■□□□□ 0.91
ERGIC3-217ENST00000488935 ANKRD13DQ6ZTN6 518 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms